P06339: H-2 class I histocompatibility antigen, D-37 alpha chain (H2-T23)

H-2 class I histocompatibility antigen, D-37 alpha chain (H2-T23) is a 357-residue protein from Mus musculus. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P06339.

Gene
H2-T23
Organism
Mus musculus
Length
357 residues
Mean pLDDT
88.4
Model
AF-P06339-F1 v6
Model created
1 Aug 2025
PDB structures
2

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Model confidence (pLDDT)

The mean pLDDT of this model is 88.4 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate78%
70 to 90Confident: backbone generally right8%
50 to 70Low: treat with caution5%
Below 50Very low: often disordered regions10%

What pLDDT means and how to read it

Function

Involved in the presentation of foreign antigens to the immune system

Subunit structure

Heterodimer of an alpha chain and a beta chain (beta-2-microglobulin)

Subcellular location

Membrane

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
3VJ6X-ray1.9 ÅA=21-297
8UMOX-ray2.6 ÅA=21-298

More AlphaFold highlights

About this viewer

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