Protein W (P/V/C) is a 448-residue protein from Hendra virus. This is its AlphaFold structure prediction, created 3 Sept 2026. UniProt accession: P0C1C6.
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The mean pLDDT of this model is 37.1 (very low overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 3% |
| 70 to 90 | Confident: backbone generally right | 7% |
| 50 to 70 | Low: treat with caution | 3% |
| Below 50 | Very low: often disordered regions | 87% |
What pLDDT means and how to read it
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 6BW9 | X-ray | 1.6 Å | B=409-448 |
| 6BW1 | X-ray | 2.2 Å | C=409-448 |
| 6BWA | X-ray | 2.2 Å | B=409-448 |
| 6BWB | X-ray | 2.3 Å | B=409-448 |
MolViewer loads the AlphaFold model straight from AlphaFold DB into your browser. Show it as a cartoon, color by pLDDT, measure distances and angles, and load a PDB structure next to it to compare.