P40568: Kinetochore-associated protein DSN1 (DSN1)

Kinetochore-associated protein DSN1 (DSN1) is a 576-residue protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c). This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P40568.

Gene
DSN1
Organism
Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
Length
576 residues
Mean pLDDT
56.8
Model
AF-P40568-F1 v6
Model created
1 Aug 2025
PDB structures
2

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Model confidence (pLDDT)

The mean pLDDT of this model is 56.8 (low overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate8%
70 to 90Confident: backbone generally right18%
50 to 70Low: treat with caution30%
Below 50Very low: often disordered regions44%

What pLDDT means and how to read it

Function

Acts as an essential component of the kinetochore MIND complex, which is required for the spindle checkpoint and kinetochore integrity. MIND plays a role in establishing a bipolar spindle-kinetochore interaction by joining kinetochore subunits contacting DNA to those contacting microtubules

Subunit structure

Component of the MIND kinetochore complex, which is composed of at least MTW1, NNF1, NSL1 and DSN1. Interacts with NSL1

Subcellular location

Nucleus, Chromosome, centromere, kinetochore

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
5T6JX-ray1.75 ÅC=560-572
6MJEX-ray2.5 ÅB/D/F/H=71-110

More AlphaFold highlights

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