Ribosome biogenesis protein RLP7 (RLP7) is a 322-residue protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c). This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P40693.
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The mean pLDDT of this model is 85.5 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 56% |
| 70 to 90 | Confident: backbone generally right | 32% |
| 50 to 70 | Low: treat with caution | 6% |
| Below 50 | Very low: often disordered regions | 6% |
What pLDDT means and how to read it
Involved in the biogenesis of the 60S ribosomal subunit. May act as a specificity factor that binds precursor rRNAs and tethers the enzymes that carry out the early 5' to 3' exonucleolytic reactions that generate the mature rRNAs
Nucleus, nucleolus
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 7UOO | EM | 2.34 Å | t=1-322 |
| 7V08 | EM | 2.36 Å | t=1-322 |
| 7UQB | EM | 2.43 Å | t=1-322 |
| 7UQZ | EM | 2.44 Å | t=2-322 |
| 8V83 | EM | 2.53 Å | t=1-322 |
| 8V87 | EM | 2.66 Å | t=1-322 |
| 8V84 | EM | 2.7 Å | t=1-322 |
| 7U0H | EM | 2.76 Å | t=1-322 |
| 7R6Q | EM | 2.98 Å | t=1-322 |
| 7NAC | EM | 3.04 Å | t=1-322 |
| 7NAD | EM | 3.04 Å | t=1-322 |
| 7R7A | EM | 3.04 Å | t=1-322 |
| 7R72 | EM | 3.07 Å | t=1-322 |
| 3JCT | EM | 3.08 Å | t=1-322 |
| 7OHQ | EM | 3.1 Å | t=1-322 |
| 6EM3 | EM | 3.2 Å | t=1-322 |
| 6M62 | EM | 3.2 Å | t=1-322 |
| 7BTB | EM | 3.22 Å | t=1-322 |
| 6ELZ | EM | 3.3 Å | t=1-322 |
| 7OHX | EM | 3.3 Å | t=1-322 |
Showing 20 of 35 experimental structures (best resolution first).
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