Ubiquitin domain-containing protein DSK2 (DSK2) is a 373-residue protein from Saccharomyces cerevisiae (strain ATCC 204508 / S288c). This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P48510.
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The mean pLDDT of this model is 68.6 (low overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 19% |
| 70 to 90 | Confident: backbone generally right | 32% |
| 50 to 70 | Low: treat with caution | 21% |
| Below 50 | Very low: often disordered regions | 28% |
What pLDDT means and how to read it
Involved, with RAD23 in spindle pole body duplication. Involved in the ubiquitin-proteasome proteolytic pathway
Nucleus
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 2BWF | X-ray | 1.15 Å | A/B=1-75 |
| 4UN2 | X-ray | 1.51 Å | B=328-373 |
| 2BWB | X-ray | 2.3 Å | A/B/C/D/E/F/G/H/I=328-371 |
| 3M63 | X-ray | 2.4 Å | B=1-75 |
| 2BWE | X-ray | 3.1 Å | A/B/C/D/E/F/G/H/I/J/K/L/M/N/O/P/Q/R=328-373, S/T/U=1-75 |
| 1WR1 | NMR | B=328-373 |
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