Protein NDRG3 (NDRG3) is a 375-residue protein from Homo sapiens. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: Q9UGV2.
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The mean pLDDT of this model is 81.1 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 63% |
| 70 to 90 | Confident: backbone generally right | 11% |
| 50 to 70 | Low: treat with caution | 6% |
| Below 50 | Very low: often disordered regions | 20% |
What pLDDT means and how to read it
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 6L4B | X-ray | 2.2 Å | A/B/C/D/E/F=1-375 |
| 9KCL | EM | 2.9 Å | N=30-327 |
| 9KCM | EM | 2.9 Å | N=30-327 |
| 9KCR | EM | 3.2 Å | N=30-327 |
| 6L4G | X-ray | 3.3 Å | A/B=1-375 |
| 6L4H | X-ray | 3.4 Å | A/B/C/D=1-375 |
MolViewer loads the AlphaFold model straight from AlphaFold DB into your browser. Show it as a cartoon, color by pLDDT, measure distances and angles, and load a PDB structure next to it to compare.