Q9Y5B8: Nucleoside diphosphate kinase homolog 7 (NME7)

Nucleoside diphosphate kinase homolog 7 (NME7) is a 376-residue protein from Homo sapiens. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: Q9Y5B8.

Gene
NME7
Organism
Homo sapiens
Length
376 residues
Mean pLDDT
93.2
Model
AF-Q9Y5B8-F1 v6
Model created
1 Aug 2025
PDB structures
2

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Model confidence (pLDDT)

The mean pLDDT of this model is 93.2 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate81%
70 to 90Confident: backbone generally right17%
50 to 70Low: treat with caution1%
Below 50Very low: often disordered regions1%

What pLDDT means and how to read it

Function

Possesses an intrinsic kinase activity (PubMed:24807905, PubMed:34764205). Phosphorylates GSK3B at 'Ser-9', leading to the activation of Wnt/beta-catenin signaling (PubMed:34764205). Additionally, exhibits a 3'-5'-DNA exonuclease activity that removes single nucleotides from the 3' terminus of single-stranded DNA substrates and digests overhanging mismatched 3' termini from double-stranded DNA substrates, possibly participating in DNA nucleolytic processing (PubMed:16313181). In vitro, does not seem to have nucleoside diphosphate kinase activity (PubMed:16313181, PubMed:24807905). Functional component of the gamma-tubulin ring complex, implicated in the regulation of its…

Subunit structure

Component of sperm flagellar doublet microtubules (By similarity). Component of the gamma-tubulin ring complex (PubMed:24807905)

Subcellular location

Cytoplasm, cytoskeleton, microtubule organizing center, centrosome, Nucleus, Cytoplasm, Cytoplasm, cytoskeleton, spindle, Cytoplasm, cytoskeleton, cilium axoneme, Cytoplasm, cytoskeleton, flagellum axoneme, Cell projection, cilium, Cytoplasm, cytoskeleton, cilium basal body

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
7UNGEM3.6 Å5/6=1-376
8J07EM4.1 Å4O/4P/4Q/4R=1-376

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