1TMR: Thrombomodulin precursor

The structure of a 19 residue fragment from the C-loop of the fourth epidermal growth factor-like domain of thrombomodulin. Determined by solution NMR. Released 8 Jun 1995.

Method
Solution NMR
Organism
Homo sapiens
Chains
1
Atoms
145
Mol. weight
2.07 kDa
Released
8 Jun 1995

Explore 1TMR in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

1TMR contains 0 α-helices and 2 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 0 helices, 2 β-strands

ElementResiduesLengthSheet
β-strand911
β-strand1211

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Thrombomodulin precursorAprotein19Homo sapiensP07204 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>1TMR_1 THROMBOMODULIN PRECURSOR (chains A)
VCAEGFAPIPGEPHRCQLF

Primary citation

The structure of a 19-residue fragment from the C-loop of the fourth epidermal growth factor-like domain of thrombomodulin. Adler, M., Seto, M.H., Nitecki, D.E. et al. J Biol Chem (1995) 270:23366-23372. DOI 10.1074/jbc.270.40.23366 · PubMed

Other PDB entries of the same protein (UniProt P07204 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

About this viewer

MolViewer shows 1TMR directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.