2PJV: Hiv-1 gp41 fusion domain

solution structure of hiv-1 gp41 fusion domain bound to DPC micelle. Determined by solution NMR. Released 1 May 2007.

Method
Solution NMR
Organism
Human immunodeficiency virus 1
Chains
1
Atoms
145
Mol. weight
2.82 kDa
Released
1 May 2007

Explore 2PJV in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2PJV contains 3 α-helices and 0 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 3 helices, 0 β-strands

ElementResiduesLengthSheet
α-helix4-63
α-helix7-115
α-helix12-143

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Envelope glycoproteinAprotein31Human immunodeficiency virus 1P19551
Sequence of entity 1 (A), FASTA
>2PJV_1 Envelope glycoprotein (chains A)
AVGIGALFLGFLGAAGSTVGAASGGGKKKKK

Primary citation

Structure and Plasticity of the Human Immunodeficiency Virus gp41 Fusion Domain in Lipid Micelles and Bilayers. Li, Y., Tamm, L.K. Biophys J (2007) 93:876-885. DOI 10.1529/biophysj.106.102335 · PubMed

Other PDB entries of the same protein (UniProt P19551), best resolution first:

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