2R4F: 3-hydroxy-3-methylglutaryl-coenzyme A reductase

Substituted Pyrazoles as Hepatselective HMG-COA reductase inhibitors. Determined by X-ray diffraction at 1.7 Å resolution. Released 29 Apr 2008.

Method
X-ray diffraction
Resolution
1.7 Å
Organism
Homo sapiens
Chains
4
Atoms
13,374
Mol. weight
192.4 kDa
Ligands
RIE
Released
29 Apr 2008

Explore 2R4F in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2R4F contains 83 α-helices and 84 β-strands across 4 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 23 helices, 21 β-strands

ElementResiduesLengthSheet
α-helix445-4539
α-helix458-4603
α-helix464-4729
α-helix478-4803
α-helix481-4844
α-helix488-50215
α-helix508-5114
α-helix519-5213
β-strand52311
β-strand52711
β-strand530-546172
β-strand549-55682
α-helix562-57514
β-strand57912
β-strand580-58783
β-strand588-59034
β-strand593-59535
α-helix599-61012
α-helix612-62312
β-strand630-63124
β-strand635-63955
β-strand642-64655
β-strand647-65044
β-strand65116
β-strand65316
β-strand65417
α-helix657-67418
β-strand679-68245
α-helix695-7006
β-strand703-712103
α-helix714-7196
α-helix725-7317
α-helix732-7376
α-helix738-7425
β-strand748-74923
α-helix753-76311
α-helix768-7703
α-helix771-7744
β-strand777-78483
β-strand790-800113
β-strand80517
α-helix807-8104
α-helix812-8209
α-helix833-85927
Chain B: 21 helices, 21 β-strands
ElementResiduesLengthSheet
α-helix442-4443
α-helix445-4495
α-helix464-47310
α-helix488-50215
α-helix508-5114
α-helix519-5213
β-strand52318
β-strand52718
β-strand530-546172
β-strand549-55682
α-helix562-57413
β-strand57912
β-strand580-58789
β-strand588-590310
β-strand593-595311
α-helix599-61012
α-helix612-62312
β-strand631110
β-strand635-639511
β-strand642-646511
β-strand647-649310
β-strand651112
β-strand653112
β-strand654113
α-helix657-67418
β-strand679-682411
α-helix695-7006
β-strand703-712109
α-helix714-7196
α-helix725-7317
α-helix732-7376
α-helix738-7425
β-strand748-74929
α-helix753-76311
α-helix768-7703
α-helix771-7744
β-strand777-78489
β-strand790-800119
β-strand805113
α-helix807-8104
α-helix812-8209
α-helix833-85927
Chain C: 20 helices, 21 β-strands
ElementResiduesLengthSheet
α-helix447-4537
α-helix464-4707
α-helix488-50013
α-helix506-5116
α-helix519-5213
β-strand523114
β-strand527114
β-strand530-5461715
β-strand549-556815
α-helix562-57413
β-strand579115
β-strand580-587816
β-strand588-590317
β-strand593-595318
α-helix599-61012
α-helix612-62312
β-strand630-631217
β-strand635-639518
β-strand642-646518
β-strand647-650417
β-strand651119
β-strand653119
β-strand654120
α-helix657-67418
β-strand679-682418
α-helix695-7006
β-strand703-7121016
α-helix714-7196
α-helix725-7317
α-helix732-7376
α-helix738-7425
β-strand748-749216
α-helix753-76311
α-helix768-7703
α-helix771-7744
β-strand777-784816
β-strand790-8001116
β-strand805120
α-helix807-8104
α-helix812-8209
α-helix833-85927
Chain D: 19 helices, 21 β-strands
ElementResiduesLengthSheet
α-helix464-4718
α-helix488-50013
α-helix506-5116
α-helix519-5213
β-strand523121
β-strand527121
β-strand530-5461715
β-strand549-556815
α-helix562-57413
β-strand579115
β-strand580-587822
β-strand588-590323
β-strand593-595324
α-helix599-61012
α-helix612-62312
β-strand631123
β-strand635-639524
β-strand642-646524
β-strand647-649323
β-strand651125
β-strand653125
β-strand654126
α-helix657-67418
β-strand679-682424
α-helix695-7006
β-strand703-7121022
α-helix714-7196
α-helix725-7317
α-helix732-7376
α-helix738-7425
β-strand748-749222
α-helix753-76311
α-helix768-7703
α-helix771-7744
β-strand777-784822
β-strand790-8001122
β-strand805126
α-helix807-8104
α-helix812-8209
α-helix833-85927

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
3-hydroxy-3-methylglutaryl-coenzyme A reductaseA, B, C, Dprotein441Homo sapiensP04035 (AlphaFold model)
Sequence of entity 1 (A, B, C, D), FASTA
>2R4F_1 3-hydroxy-3-methylglutaryl-coenzyme A reductase (chains A, B, C, D)
HHHHHHEPRPNEECLQILGNAEKGAKFLSDAEIIQLVNAKHIPAYKLETLIETHERGVSI
RRQLLSKKLSEPSSLQYLPYRDYNYSLVMGACCENVIGYMPIPVGVAGPLCLDEKEFQVP
MATTEGCLVASTNRGCRAIGLGGGASSRVLADGMTRGPVVRLPRACDSAEVKAWLETSEG
FAVIKEAFDSTSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEKALSKLHEY
FPEMQILAVSGNYCTDKKPAAINWIEGRGKSVVCEAVIPAKVVREVLKTTTEAMIEVNIN
KNLVGSAMAGSIGGYNAHAANIVTAIYIACGQDAAQNVGSSNCITLMEASGPTNEDLYIS
CTMPSIEIGTVGGGTNLLPQQACLQMLGVQGACKDNPGENARQLARIVCGTVMAGELSLM
AALAAGHLVKSHMIHNRSKIN

Ligands and cofactors

IDNameFormulaCopies
RIE(3R,5R)-7-[1-(4-fluorophenyl)-4-(1-methylethyl)-3-{methyl[(1R)-1-phenylethyl]ca…C29 H36 F N3 O54

Water and common crystallization additives (SO4) are not listed.

Primary citation

Substituted pyrazoles as hepatoselective HMG-CoA reductase inhibitors: discovery of (3R,5R)-7-[2-(4-fluoro-phenyl)-4-isopropyl-5-(4-methyl-benzylcarbamoyl)-2H-pyrazol-3-yl]-3,5-dihydroxyheptanoic acid (PF-3052334) as a candidate for the treatment of hypercholesterolemia. Pfefferkorn, J.A., Choi, C., Larsen, S.D. et al. J Med Chem (2008) 51:31-45. DOI 10.1021/jm070849r · PubMed

Other PDB entries of the same protein (UniProt P04035 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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