3CCZ: 3-hydroxy-3-methylglutaryl-coenzyme A reductase

Thermodynamic and structure guided design of statin hmg-coa reductase inhibitors. Determined by X-ray diffraction at 1.7 Å resolution. Released 17 Jun 2008.

Method
X-ray diffraction
Resolution
1.7 Å
Organism
Homo sapiens
Chains
4
Atoms
13,469
Mol. weight
192.41 kDa
Ligands
5HI
Released
17 Jun 2008

Explore 3CCZ in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

3CCZ contains 77 α-helices and 84 β-strands across 4 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 21 helices, 21 β-strands

ElementResiduesLengthSheet
α-helix445-4539
α-helix458-4603
α-helix464-4729
α-helix478-4803
α-helix481-4844
α-helix488-50215
β-strand52311
β-strand52711
β-strand530-546172
β-strand549-55682
α-helix562-57514
β-strand57912
β-strand580-58783
β-strand588-59034
β-strand593-59535
α-helix599-61012
α-helix612-62312
β-strand630-63124
β-strand635-63955
β-strand642-64655
β-strand647-65044
β-strand65116
β-strand65316
β-strand65417
α-helix657-67418
β-strand679-68245
α-helix695-7006
β-strand703-712103
α-helix714-7196
α-helix725-7317
α-helix732-7376
α-helix738-7425
β-strand748-74923
α-helix753-76311
α-helix768-7703
α-helix771-7744
β-strand777-78483
β-strand790-800113
β-strand80517
α-helix807-8104
α-helix812-82110
α-helix833-85927
Chain B: 19 helices, 20 β-strands
ElementResiduesLengthSheet
α-helix442-4443
α-helix445-4517
α-helix464-4729
α-helix488-50215
β-strand52318
β-strand52718
β-strand530-546172
β-strand549-55682
α-helix562-57514
β-strand579-58792
β-strand588-59039
β-strand593-595310
α-helix599-61012
α-helix612-62312
β-strand63119
β-strand635-639510
β-strand642-646510
β-strand647-64939
β-strand651111
β-strand653111
β-strand654112
α-helix657-67418
β-strand679-682410
α-helix695-7006
β-strand703-712102
α-helix714-7196
α-helix725-7317
α-helix732-7376
α-helix738-7425
β-strand748-74922
α-helix753-76311
α-helix768-7703
α-helix771-7744
β-strand777-78482
β-strand790-800112
β-strand805112
α-helix807-8104
α-helix812-82110
α-helix833-85927
Chain C: 19 helices, 21 β-strands
ElementResiduesLengthSheet
α-helix446-4538
α-helix464-4707
α-helix488-50215
α-helix506-5116
β-strand523113
β-strand527113
β-strand530-5461714
β-strand549-556814
α-helix562-57514
β-strand579114
β-strand580-587815
β-strand588-590316
β-strand593-595317
α-helix599-61012
α-helix612-62312
β-strand631116
β-strand635-639517
β-strand642-646517
β-strand647-649316
β-strand651118
β-strand653118
β-strand654119
α-helix657-67418
β-strand679-682417
α-helix695-7006
β-strand703-7121015
α-helix714-7196
α-helix725-7317
α-helix732-7376
α-helix738-7425
β-strand748-749215
α-helix753-76311
α-helix768-7703
α-helix771-7744
β-strand777-784815
β-strand790-8001115
β-strand805119
α-helix807-8104
α-helix812-8209
α-helix833-85927
Chain D: 18 helices, 22 β-strands
ElementResiduesLengthSheet
α-helix464-4718
α-helix488-50013
α-helix506-5116
β-strand523120
β-strand527120
β-strand530-5451614
β-strand546121
β-strand550-556714
α-helix562-57514
β-strand579121
β-strand580-587822
β-strand588-590323
β-strand593-595324
α-helix599-61012
α-helix612-62312
β-strand630-631223
β-strand635-639524
β-strand642-646524
β-strand647-650423
β-strand651125
β-strand653125
β-strand654126
α-helix657-67418
β-strand679-682424
α-helix695-7006
β-strand703-7121022
α-helix714-7196
α-helix725-7317
α-helix732-7376
α-helix738-7425
β-strand748-749222
α-helix753-76311
α-helix768-7703
α-helix771-7744
β-strand777-784822
β-strand790-8001122
β-strand805126
α-helix807-8104
α-helix812-8209
α-helix833-85927

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
3-hydroxy-3-methylglutaryl-coenzyme A reductaseA, B, C, Dprotein441Homo sapiensP04035 (AlphaFold model)
Sequence of entity 1 (A, B, C, D), FASTA
>3CCZ_1 3-hydroxy-3-methylglutaryl-coenzyme A reductase (chains A, B, C, D)
HHHHHHEPRPNEECLQILGNAEKGAKFLSDAEIIQLVNAKHIPAYKLETLIETHERGVSI
RRQLLSKKLSEPSSLQYLPYRDYNYSLVMGACCENVIGYMPIPVGVAGPLCLDEKEFQVP
MATTEGCLVASTNRGCRAIGLGGGASSRVLADGMTRGPVVRLPRACDSAEVKAWLETSEG
FAVIKEAFDSTSRFARLQKLHTSIAGRNLYIRFQSRSGDAMGMNMISKGTEKALSKLHEY
FPEMQILAVSGNYCTDKKPAAINWIEGRGKSVVCEAVIPAKVVREVLKTTTEAMIEVNIN
KNLVGSAMAGSIGGYNAHAANIVTAIYIACGQDAAQNVGSSNCITLMEASGPTNEDLYIS
CTMPSIEIGTVGGGTNLLPQQACLQMLGVQGACKDNPGENARQLARIVCGTVMAGELSLM
AALAAGHLVKSHMIHNRSKIN

Ligands and cofactors

IDNameFormulaCopies
5HI(3R,5R)-7-[2-(4-fluorophenyl)-4-{[(1S)-2-hydroxy-1-phenylethyl]carbamoyl}-5-(1-…C28 H34 F N3 O64

Water and common crystallization additives (SO4) are not listed.

Primary citation

Thermodynamic and structure guided design of statin based inhibitors of 3-hydroxy-3-methylglutaryl coenzyme a reductase. Sarver, R.W., Bills, E., Bolton, G. et al. J Med Chem (2008) 51:3804-3813. DOI 10.1021/jm7015057 · PubMed

Other PDB entries of the same protein (UniProt P04035 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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