2XDF: Enzyme I Dimer

Solution Structure of the Enzyme I Dimer Complexed with HPr Using Residual Dipolar Couplings and Small Angle X-Ray Scattering. Determined by solution NMR. Released 22 Sept 2010.

Method
Solution NMR
Organism
ESCHERICHIA COLI
Chains
4
Atoms
10,164
Mol. weight
145.1 kDa
Released
22 Sept 2010

Explore 2XDF in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2XDF contains 66 α-helices and 42 β-strands across 4 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chains A and B: 30 helices, 17 β-strands

ElementResiduesLengthSheet
β-strand811
β-strand12-1871
α-helix22-254
α-helix33-6432
α-helix67-8014
α-helix83-919
α-helix92-965
α-helix100-11617
α-helix121-14222
β-strand156-16051
α-helix165-1695
β-strand176-18161
α-helix189-1979
β-strand201-20221
β-strand216-22051
β-strand227-22931
α-helix233-25523
β-strand261-26222
β-strand268-26922
β-strand270-27563
α-helix279-2879
β-strand292-29653
α-helix297-3015
α-helix310-32314
β-strand329-33243
α-helix333-3342
α-helix343-3453
α-helix347-3493
α-helix353-3553
α-helix360-3634
α-helix367-38014
β-strand386-39053
α-helix396-41520
β-strand425-43063
α-helix433-4375
α-helix439-4435
β-strand448-45143
α-helix453-4619
α-helix468-4736
α-helix479-49416
β-strand498-50143
α-helix512-5176
β-strand522-52543
α-helix527-5293
α-helix530-5389
α-helix542-55413
α-helix558-57215
Chains C and D: 3 helices, 4 β-strands
ElementResiduesLengthSheet
β-strand602-60767
α-helix616-62611
β-strand632-63767
β-strand640-64347
α-helix647-6504
β-strand660-66677
α-helix670-68314

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Phosphoenolpyruvate-protein phosphotransferaseA, Bprotein573ESCHERICHIA COLIP08839 (AlphaFold model)
Phosphocarrier protein hprC, Dprotein85ESCHERICHIA COLIP0AA04 (AlphaFold model)
Sequence of entity 1 (A, B), FASTA
>2XDF_1 PHOSPHOENOLPYRUVATE-PROTEIN PHOSPHOTRANSFERASE (chains A, B)
MISGILASPGIAFGKALLLKEDEIVIDRKKISADQVDQEVERFLSGRAKASAQLETIKTK
AGETFGEEKEAIFEGHIMLLEDEELEQEIIALIKDKHMTADAAAHEVIEGQASALEELDD
EYLKERAADVRDIGKRLLRNILGLKIIDLSAIQDEVILVAADLTPSETAQLNLKKVLGFI
TDAGGRTSHTSIMARSLELPAIVGTGSVTSQVKNDDYLILDAVNNQVYVNPTNEVIDKMR
AVQEQVASEKAELAKLKDLPAITLDGHQVEVCANIGTVRDVEGAERNGAEGVGLYRTEFL
FMDRDALPTEEEQFAAYKAVAEACGSQAVIVRTMDIGGDKELPYMNFPKEENPFLGWRAI
RIAMDRREILRDQLRAILRASAFGKLRIMFPMIISVEEVRALRKEIEIYKQELRDEGKAF
DESIEIGVMVETPAAATIARHLAKEVDFFSIGTNDLTQYTLAVDRGNDMISHLYQPMSPS
VLNLIKQVIDASHAEGKWTGMCGELAGDERATLLLLGMGLDEFSMSAISIPRIKKIIRNT
NFEDAKVLAEQALAQPTTDELMTLVNKFIEEKT
Sequence of entity 2 (C, D), FASTA
>2XDF_2 PHOSPHOCARRIER PROTEIN HPR (chains C, D)
MFQQEVTITAPNGLHTRPAAQFVKEAKGFTSEITVTSNGKSASAKSLFKLQTLGLTQGTV
VTISAEGEDEQKAVEHLVKLMAELE

Primary citation

Solution Structure of the 128 kDa Enzyme I Dimer from Escherichia Coli and its 146 kDa Complex with Hpr Using Residual Dipolar Couplings and Small- and Wide-Angle X-Ray Scattering. Schwieters, C.D., Suh, J.Y., Grishaev, A. et al. J Am Chem Soc (2010) 132:13026. DOI 10.1021/JA105485B · PubMed

Other PDB entries of the same protein (UniProt P08839 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

About this viewer

MolViewer shows 2XDF directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.