Crystal structure of Nurf55 in complex with Su(z)12. Determined by X-ray diffraction at 2.3 Å resolution. Released 18 May 2011.
Explore 2YB8 in 3D Show helices and sheets RCSB PDB PDBe
2YB8 contains 8 α-helices and 30 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 84-86 | 3 | |
| α-helix | 88-90 | 3 |
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 17-35 | 19 | |
| β-strand | 36-43 | 8 | 1 |
| β-strand | 51-59 | 9 | 2 |
| β-strand | 65-73 | 9 | 2 |
| β-strand | 81-91 | 11 | 2 |
| β-strand | 119-127 | 9 | 2 |
| β-strand | 133-137 | 5 | 3 |
| β-strand | 140-147 | 8 | 3 |
| β-strand | 153-157 | 5 | 3 |
| α-helix | 158-160 | 3 | |
| β-strand | 175-178 | 4 | 3 |
| β-strand | 187-189 | 3 | 4 |
| β-strand | 196-200 | 5 | 4 |
| β-strand | 206-210 | 5 | 4 |
| α-helix | 214-215 | 2 | |
| β-strand | 216 | 1 | 3 |
| β-strand | 220-222 | 3 | 3 |
| β-strand | 225-227 | 3 | 4 |
| β-strand | 234-239 | 6 | 5 |
| β-strand | 246-251 | 6 | 5 |
| β-strand | 256-260 | 5 | 5 |
| β-strand | 271-273 | 3 | 5 |
| β-strand | 280-285 | 6 | 6 |
| β-strand | 292-297 | 6 | 6 |
| β-strand | 301-306 | 6 | 6 |
| β-strand | 315-318 | 4 | 6 |
| β-strand | 326-329 | 4 | 7 |
| β-strand | 336-340 | 5 | 7 |
| β-strand | 346-350 | 5 | 7 |
| α-helix | 351-353 | 3 | |
| α-helix | 362-364 | 3 | |
| β-strand | 370-374 | 5 | 7 |
| β-strand | 381-386 | 6 | 1 |
| β-strand | 393-398 | 6 | 1 |
| β-strand | 402-408 | 7 | 1 |
| α-helix | 410-413 | 4 |
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|---|---|---|---|---|
| Polycomb protein SU(Z)12 | A | protein | 13 | DROSOPHILA MELANOGASTER | Q9NJG9 (AlphaFold model) |
| Probable histone-binding protein CAF1 | B | protein | 422 | DROSOPHILA MELANOGASTER | Q24572 (AlphaFold model) |
>2YB8_1 POLYCOMB PROTEIN SU(Z)12 (chains A) NPIFLNRTLSYMK
>2YB8_2 PROBABLE HISTONE-BINDING PROTEIN CAF1 (chains B) GGGRMVDRSDNAAESFDDAVEERVINEEYKIWKKNTPFLYDLVMTHALEWPSLTAQWLPD VTKQDGKDYSVHRLILGTHTSDEQNHLLIASVQLPSEDAQFDGSHYDNEKGEFGGFGSVC GKIEIEIKINHEGEVNRARYMPQNACVIATKTPSSDVLVFDYTKHPSKPEPSGECQPDLR LRGHQKEGYGLSWNPNLNGYLLSASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVED VAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVDAHTAEVNCLSFNPYSEFILATG SADKTVALWDLRNLKLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIGE EQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAENVYNDE EP
Histone Methylation by Prc2 is Inhibited by Active Chromatin Marks. Schmitges, F.W., Prusty, A.B., Faty, M. et al. Mol Cell (2011) 42:330. DOI 10.1016/J.MOLCEL.2011.03.025 · PubMed
MolViewer shows 2YB8 directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.