3CHW: Major actin

Complex of Dictyostelium discoideum Actin with Profilin and the Last Poly-Pro of Human VASP. Determined by X-ray diffraction at 2.3 Å resolution. Released 19 Aug 2008.

Method
X-ray diffraction
Resolution
2.3 Å
Organisms
Dictyostelium discoideum, Homo sapiens
Chains
3
Atoms
4,369
Mol. weight
58.5 kDa
Ligands
CA, ATP
Released
19 Aug 2008

Explore 3CHW in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

3CHW contains 33 α-helices and 26 β-strands across 3 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 25 helices, 19 β-strands

ElementResiduesLengthSheet
α-helix6-72
β-strand8-1251
β-strand16-2161
β-strand29-3241
β-strand35-3842
β-strand53-5422
α-helix56-605
β-strand65-6842
β-strand71-7223
β-strand75-7623
α-helix79-8810
α-helix89-935
α-helix98-1003
β-strand103-10751
α-helix113-1219
α-helix122-1265
β-strand131-13661
α-helix137-1448
β-strand150-15564
β-strand160-16674
β-strand169-17024
α-helix172-1743
β-strand176-17834
α-helix182-19413
α-helix203-21614
α-helix223-23210
β-strand238-24145
β-strand247-25045
α-helix253-2597
α-helix264-2674
α-helix271-2733
α-helix274-28310
α-helix290-2945
β-strand297-30044
α-helix302-3043
α-helix309-31810
β-strand329-33024
α-helix335-3373
α-helix338-34710
α-helix350-3534
α-helix3561
β-strand357-35821
α-helix359-3657
α-helix369-3735
Chain P: 7 helices, 7 β-strands
ElementResiduesLengthSheet
α-helix4-118
β-strand16-2386
β-strand29-3356
α-helix39-413
α-helix44-518
α-helix57-615
β-strand63-6536
β-strand68-7696
β-strand84-8966
α-helix95-973
β-strand99-10466
β-strand108-11476
α-helix1151
α-helix120-13516
Chain V: 1 helix, 0 β-strands
ElementResiduesLengthSheet
α-helix203-2119

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Major actinAprotein375Dictyostelium discoideumP07830 (AlphaFold model)
Profilin-1Pprotein139Homo sapiensP07737 (AlphaFold model)
Vasodilator-stimulated phosphoprotein 16-residue peptideVprotein16P50552 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>3CHW_1 Major actin (chains A)
DGEDVQALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHTGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVSHTVPIYEGYALPHAILRLDL
AGRDLTDYMMKILTERGYSFTTTAEREIVRDIKEKLAYVALDFEAEMQTAASSSALEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESAGIHETTYNSIMKCDVDIRKDLYGNVVLS
GGTTMFPGIADRMNKELTALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKE
EYDESGPSIVHRKCF
Sequence of entity 2 (P), FASTA
>3CHW_2 Profilin-1 (chains P)
AGWNAYIDNLMADGTCQDAAIVGYKDSPSVWAAVPGKTFVNITPAEVGVLVGKDRSSFYV
NGLTLGGQKCSVIRDSLLQDGEFSMDLRTKSTGGAPTFNVTVTKTDKTLVLLMGKEGVHG
GLINKKCYEMASHLRRSQY
Sequence of entity 3 (V), FASTA
>3CHW_3 Vasodilator-stimulated phosphoprotein 16-residue peptide (chains V)
GAGGGPPPAPPLPAAQ

Ligands and cofactors

IDNameFormulaCopies
CACalcium ionCa1
ATPAdenosine-5'-triphosphateC10 H16 N5 O13 P31

Primary citation

Modulation of actin structure and function by phosphorylation of Tyr-53 and profilin binding. Baek, K., Liu, X., Ferron, F. et al. Proc Natl Acad Sci U S A (2008) 105:11748-11753. DOI 10.1073/pnas.0805852105 · PubMed

Other PDB entries of the same protein (UniProt P07830 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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