3CKZ: N1 Neuraminidase H274Y + Zanamivir

N1 Neuraminidase H274Y + Zanamivir. Determined by X-ray diffraction at 1.9 Å resolution. Released 20 May 2008.

Method
X-ray diffraction
Resolution
1.9 Å
Organism
Influenza A virus
Chains
1
Atoms
3,175
Mol. weight
42.58 kDa
Ligands
ZMR, CA
Released
20 May 2008

Explore 3CKZ in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

3CKZ contains 7 α-helices and 28 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 7 helices, 28 β-strands

ElementResiduesLengthSheet
α-helix901
β-strand9111
α-helix92-932
β-strand96-10272
α-helix105-1095
β-strand115-124103
β-strand129-139113
α-helix143-1453
β-strand157-16263
β-strand172-17653
β-strand179-18464
β-strand189-19574
β-strand202-20764
β-strand210-21674
β-strand22415
β-strand22914
β-strand231-23335
β-strand236-24385
β-strand251-25885
β-strand261-26775
β-strand279-28356
β-strand286-29056
α-helix3001
β-strand301-30666
β-strand312-31656
β-strand353-35647
β-strand359-36467
β-strand372-37987
β-strand392-403117
β-strand407-41262
α-helix412B-4134
β-strand41811
β-strand419-429112
β-strand439-449112
α-helix4661

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
NeuraminidaseAprotein385Influenza A virusQ6DPL2
Sequence of entity 1 (A), FASTA
>3CKZ_1 Neuraminidase (chains A)
VKLAGNSSLCPINGWAVYSKDNSIRIGSKGDVFVIREPFISCSHLECRTFFLTQGALLND
KHSNGTVKDRSPHRTLMSCPVGEAPSPYNSRFESVAWSASACHDGTSWLTIGISGPDNGA
VAVLKYNGIITDTIKSWRNNILRTQESECACVNGSCFTVMTDGPSNGQASYKIFKMEKGK
VVKSVELDAPNYYYEECSCYPNAGEITCVCRDNWHGSNRPWVSFNQNLEYQIGYICSGVF
GDNPRPNDGTGSCGPVSSNGAYGVKGFSFKYGNGVWIGRTKSTNSRSGFEMIWDPNGWTE
TDSSFSVKQDIVAITDWSGYSGSFVQHPELTGLDCIRPCFWVELIRGRPKESTIWTSGSS
ISFCGVNSDTVGWSWPDGAELPFTI

Ligands and cofactors

IDNameFormulaCopies
ZMRZanamivirC12 H20 N4 O71
CACalcium ionCa1

Primary citation

Crystal structures of oseltamivir-resistant influenza virus neuraminidase mutants. Collins, P.J., Haire, L.F., Lin, Y.P. et al. Nature (2008) 453:1258-1261. DOI 10.1038/nature06956 · PubMed

Other PDB entries of the same protein (UniProt Q6DPL2), best resolution first:

Browse structure collections

About this viewer

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