3QOR: Human nuclear migration protein NudC

Crystal structure of human nuclear migration protein NudC. Determined by X-ray diffraction at 1.75 Å resolution. Released 27 Apr 2011.

Method
X-ray diffraction
Resolution
1.75 Å
Organism
Homo sapiens
Chains
5
Atoms
5,753
Mol. weight
68.52 kDa
Released
27 Apr 2011

Explore 3QOR in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

3QOR contains 26 α-helices and 70 β-strands across 5 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chains A and B: 4 helices, 14 β-strands

ElementResiduesLengthSheet
β-strand15911
β-strand16812
β-strand173-17642
β-strand180-18672
α-helix195-1973
β-strand198-20363
β-strand206-21163
β-strand218-22143
β-strand22214
β-strand22615
α-helix228-2303
β-strand232-23652
β-strand240-24672
β-strand24715
β-strand25814
α-helix262-2632
β-strand26411
α-helix266-2683
Chains C and D: 6 helices, 14 β-strands
ElementResiduesLengthSheet
α-helix1581
β-strand159111
α-helix160-1612
β-strand168112
β-strand173-176412
β-strand180-186712
α-helix195-1973
β-strand198-203613
β-strand206-211613
β-strand218-221413
β-strand222114
β-strand226115
α-helix228-2303
β-strand232-236512
β-strand240-246712
β-strand247115
β-strand258114
α-helix262-2632
β-strand264111
α-helix266-2683
Chain E: 6 helices, 14 β-strands
ElementResiduesLengthSheet
β-strand159121
α-helix160-1612
β-strand167-168212
β-strand173-176412
β-strand180-186712
α-helix195-1973
β-strand198-203622
β-strand206-211622
β-strand218-221422
β-strand222123
β-strand226124
α-helix228-2303
β-strand232-236512
β-strand240-246712
β-strand247124
β-strand258123
α-helix262-2632
β-strand264121
α-helix266-2683
α-helix271-2733

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Nuclear migration protein nudCAprotein121Homo sapiensQ9Y266 (AlphaFold model)
Nuclear migration protein nudCBprotein121Homo sapiensQ9Y266 (AlphaFold model)
Nuclear migration protein nudCCprotein121Homo sapiensQ9Y266 (AlphaFold model)
Nuclear migration protein nudCD, Eprotein121Homo sapiensQ9Y266 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>3QOR_1 Nuclear migration protein nudC (chains A)
GSSSKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG
QPAIIDGELYNEVKVEESSWLIADGAVVTVHLEKINKMEWWSRLVSSDPEINTKKINPEN
S
Sequence of entity 2 (B), FASTA
>3QOR_2 Nuclear migration protein nudC (chains B)
GSSSKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG
QPAIIDGELYNEVKVEESSWLIADGAVVTVHLEKINKMEWWSRLVSSDPEINTKKINPEN
S
Sequence of entity 3 (C), FASTA
>3QOR_3 Nuclear migration protein nudC (chains C)
GSSSKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG
QPAIIDGELYNEVKVEESSWLIADGAVVTVHLEKINKMEWWSRLVSSDPEINTKKINPEN
S
Sequence of entity 4 (D, E), FASTA
>3QOR_4 Nuclear migration protein nudC (chains D, E)
GSSSKLKPNLGNGADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLKG
QPAIIDGELYNEVKVEESSWLIADGAVVTVHLEKINKMEWWSRLVSSDPEINTKKINPEN
S

Primary citation

Structural Features and Chaperone Activity of the NudC Protein Family. Zheng, M., Cierpicki, T., Burdette, A.J. et al. J Mol Biol (2011) 409:722-741. DOI 10.1016/j.jmb.2011.04.018 · PubMed

Other PDB entries of the same protein (UniProt Q9Y266 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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