3RNJ: SH3 domain from IRSp53

Crystal structure of the SH3 domain from IRSp53 (BAIAP2). Determined by X-ray diffraction at 1.5 Å resolution. Released 4 May 2011.

Method
X-ray diffraction
Resolution
1.5 Å
Organism
Homo sapiens
Chains
1
Atoms
676
Mol. weight
8.05 kDa
Ligands
IPA, EDT
Released
4 May 2011

Explore 3RNJ in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

3RNJ contains 2 α-helices and 9 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 2 helices, 9 β-strands

ElementResiduesLengthSheet
β-strand378-38141
β-strand38512
β-strand39311
α-helix394-3952
β-strand39612
β-strand401-40441
β-strand41011
β-strand413-41861
β-strand424-42851
α-helix429-4313
β-strand432-43431

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Brain-specific angiogenesis inhibitor 1-associated protein 2Aprotein67Homo sapiensQ9UQB8 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>3RNJ_1 Brain-specific angiogenesis inhibitor 1-associated protein 2 (chains A)
GPLGSGRMRVKAIFSHAAGDNSTLLSFKEGDLITLLVPEARDGWHYGESEKTKMRGWFPF
SYTRVLD

Ligands and cofactors

IDNameFormulaCopies
IPAIsopropyl alcoholC3 H8 O1
EDT{[-(bis-carboxymethyl-amino)-ethyl]-carboxymethyl-amino}-acetic acidC10 H16 N2 O81

Water and common crystallization additives (EDO) are not listed.

Primary citation

Crystal structure of the SH3 domain from IRSp53 (BAIAP2). Simister, P.C., Barilari, M., Muniz, J.R.C. et al. To be published.

Other PDB entries of the same protein (UniProt Q9UQB8 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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