3ZUE: Capsid structural protein VP60

Rabbit Hemorrhagic Disease Virus (RHDV)capsid protein. Determined by electron microscopy at 10.3 Å resolution. Released 23 May 2012.

Method

Electron microscopy

Resolution

10.3 Å

Organism

RABBIT HEMORRHAGIC DISEASE VIRUS

Chains

3

Atoms

1,637

Mol. weight

180.79 kDa

Released

23 May 2012

Explore 3ZUE in 3D Show helices and sheets RCSB PDB PDBe

Molecules and chains

>3ZUE_1 CAPSID STRUCTURAL PROTEIN VP60 (chains A, B, C)
MEGKARTAPQGEAAGTATTASVPGTTTDGLDPGVVATTSVVTAENSSASIATAGIGGPPQ
QVDQQETWRTNFYYNDVFTWSVADAPGSILYTVQHSPQNNPFTAVLSQMYAGWAGGMQFR
FIVAGSGVFGGRLVAAVIPPGIEIGPGLEVRQFPHVVIDARSLEPVTNTMPDLRPNMYHP
TGDPGLVPTLVLSVYNNLINPFGGSTSAIQVTVETRPSEDFEFVMIRAPSSKTVDSISPA
GLLTTPVLTGVGNDNRWNGQIVGLQPVPGGFSTCNRHWNLNGSTYGWSSPRFADIDHRRG
SASYPGNNATNVLQFWYANAGSAVDNPISQVAPDGFPDMSFVPFNGPGIPAAGWVGFGAI
WNSNSGAPNVTTVQAYELGFATGAPGNLQPTTNTSGAQTVAKSIYAVVTGTAQNPAGLFV
MASGVISTPNANAITYTPQPDRIVTTPGTPAAAPVGKNTPIMFASVVRRTGDVNATAGSA
SGTQYGTGSQPLPVTIGLSLNNYSSSLMPGQFFVWQLTFASGFMEIGLSVDGYFYAGTGA
LTTLIDLTELIDVRPVGPRPSKSTLVFNLGGTANGFSYV

Primary citation

Epitope Insertion at the N-Terminal Molecular Switch of the Rabbit Hemorrhagic Disease Virus T=3 Capsid Protein Leads to Larger T=4 Capsids. Luque, D., Gonzalez, J.M., Gomez-Blanco, J. et al. J Virol (2012) 86:6470. DOI 10.1128/JVI.07050-11 · PubMed

Related structures

Other PDB entries of the same protein (UniProt Q86119), best resolution first:

• 8CYL 1.89 Å, Ast89 P domain
• 9I3H 2.5 Å, CP of RHDV mutant - N15
• 9I8J 2.9 Å, AB Spike of RHDV mutant N15
• 9I3E 3.0 Å, CP of RHDV mutant - 29N
• 9I90 3.2 Å, CP of empty RHDV virion
• 9I8R 3.3 Å, CP of RHDV VLP (VP1)
• 9I9D 3.3 Å, CP of RHDV virion (full particle)

Browse structure collections

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