4K96: Binary Complex of cGAS with Bound dsDNA

Structure of Binary Complex of cGAS with Bound dsDNA. Determined by X-ray diffraction at 2.08 Å resolution. Released 15 May 2013.

Method

X-ray diffraction

Resolution

2.08 Å

Organism

Mus musculus

Chains

6

Atoms

7,981

Mol. weight

105.98 kDa

Ligands

ZN

Released

15 May 2013

Explore 4K96 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

4K96 contains 39 α-helices and 28 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 20 helices, 14 β-strands

Molecules and chains

>4K96_1 Cyclic GMP-AMP synthase (chains A, B)
SPDKLKKVLDKLRLKRKDISEAAETVNKVVERLLRRMQKRESEFKGVEQLNTGSYYEHVK
ISAPNEFDVMFKLEVPRIELQEYYETGAFYLVKFKRIPRGNPLSHFLEGEVLSATKMLSK
FRKIIKEEVKEIKDIDVSVEKEKPGSPAVTLLIRNPEEISVDIILALESKGSWPISTKEG
LPIQGWLGTKVRTNLRREPFYLVPKNAKDGNSFQGETWRLSFSHTEKYILNNHGIEKTCC
ESSGAKCCRKECLKLMKYLLEQLKKEFQELDAFCSYHVKTAIFHMWTQDPQDSQWDPRNL
SSCFDKLLAFFLECLRTEKLDHYFIPKFNLFSQELIDRKSKEFLSKKIEYERNNGFPIFD
KL

>4K96_2 DNA-F (chains E, G)
AAATTGCCGAAGACGAA

>4K96_3 DNA-R (chains F, H)
TTTCGTCTTCGGCAATT

Ligands and cofactors

Primary citation

Cyclic [G(2',5')pA(3',5')p] is the metazoan second messenger produced by DNA-activated cyclic GMP-AMP synthase. Gao, P., Ascano, M., Wu, Y. et al. Cell (2013) 153:1094-1107. DOI 10.1016/j.cell.2013.04.046 · PubMed

Related structures

Other PDB entries of the same protein (UniProt Q8C6L5 (AlphaFold model), which also has an AlphaFold model), best resolution first:

• 8SHK 1.71 Å, Structure of binary complex of mouse cGAS and bound ATP
• 8SHU 1.71 Å, Structure of mouse cGAS
• 8SHY 1.77 Å, Structure of binary complex of mouse cGAS QN and bound ATP
• 5XZG 1.83 Å, Mouse cGAS bound to the inhibitor RU521
• 4O6A 1.86 Å, Mouse cyclic GMP-AMP synthase (cGAS) in complex with DNA
• 4K98 1.94 Å, Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppG(2 ,5 )pG
• 4K99 1.95 Å, Structure of Ternary Complex of cGAS with dsDNA and Bound 5 -pppdG(2 ,5 )pdG
• 4K8V 2.0 Å, Structure of cyclic GMP-AMP Synthase (cGAS)
• 7UTT 2.04 Å, Structure of Non-hydrolyzable ATP (ApCpp) binds to Cyclic GMP AMP synthase (cGAS)…
• 5XZB 2.13 Å, Mouse cGAS bound to the inhibitor RU365
• 7BUJ 2.13 Å, mcGAS bound with pppGpG
• 5XZE 2.18 Å, Mouse cGAS bound to the inhibitor RU332

Browse structure collections

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