5HES: PDB entry 5HES

Human leucine zipper- and sterile alpha motif-containing kinase (ZAK, MLT, HCCS-4, MRK, AZK, MLTK) in complex with vemurafenib. Determined by X-ray diffraction at 2.14 Å resolution. Released 30 Mar 2016.

Method
X-ray diffraction
Resolution
2.14 Å
Organism
Homo sapiens
Chains
2
Atoms
4,782
Mol. weight
71.57 kDa
Ligands
032
Released
30 Mar 2016

Explore 5HES in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

5HES contains 39 α-helices and 20 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 20 helices, 10 β-strands

ElementResiduesLengthSheet
β-strand1011
α-helix13-153
β-strand16-2161
α-helix22-254
β-strand30-3561
α-helix36-383
β-strand40-4781
α-helix53-575
β-strand6512
α-helix66-672
β-strand68-7471
β-strand77-8371
β-strand88-8922
α-helix90-945
α-helix97-1015
α-helix104-11916
α-helix120-1245
α-helix136-1383
β-strand139-14132
β-strand147-14932
α-helix170-1723
α-helix175-1784
α-helix186-20116
α-helix211-22010
α-helix233-24210
α-helix247-2493
α-helix251-2522
α-helix253-26513
α-helix269-27810
α-helix280-29819
Chain B: 19 helices, 10 β-strands
ElementResiduesLengthSheet
β-strand10-1123
α-helix13-153
β-strand16-2163
α-helix22-254
β-strand30-3563
β-strand40-4783
α-helix53-597
β-strand6514
α-helix66-672
β-strand68-7473
β-strand77-8373
β-strand8914
α-helix90-945
α-helix97-1015
α-helix104-11916
α-helix120-1245
α-helix136-1383
β-strand139-14134
β-strand147-14934
α-helix170-1723
α-helix175-1784
α-helix186-20116
α-helix211-22111
α-helix233-24311
α-helix247-2493
α-helix251-2522
α-helix253-26311
α-helix269-2779
α-helix280-29617

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Mitogen-activated protein kinase kinase kinase MLTA, Bprotein307Homo sapiensQ9NYL2 (AlphaFold model)
Sequence of entity 1 (A, B), FASTA
>5HES_1 Mitogen-activated protein kinase kinase kinase MLT (chains A, B)
SMGASFVQIKFDDLQFFENCGGGSFGSVYRAKWISQDKEVAVKKLLKIEKEAEILSVLSH
RNIIQFYGVILEPPNYGIVTEYASLGSLYDYINSNRSEEMDMDHIMTWATDVAKGMHYLH
MEAPVKVIHRDLKSRNVVIAADGVLKICDFGASRFHNHTTHMSLVGTFPWMAPEVIQSLP
VSETCDTYSYGVVLWEMLTREVPFKGLEGLQVAWLVVEKNERLTIPSSCPRSFAELLHQC
WEADAKKRPSFKQIISILESMSNDTSLPDKCNSFLHNKAEWRCEIEATLERLKKLERDLS
FKEQELK

Ligands and cofactors

IDNameFormulaCopies
032N-(3-{[5-(4-chlorophenyl)-1H-pyrrolo[2,3-b]pyridin-3-yl]carbonyl}-2,4-difluorop…C23 H18 Cl F2 N3 O3 S2

Water and common crystallization additives (EDO) are not listed.

Primary citation

Structure of the Human Protein Kinase ZAK in Complex with Vemurafenib. Mathea, S., Abdul Azeez, K.R., Salah, E. et al. ACS Chem Biol (2016) 11:1595-1602. DOI 10.1021/acschembio.6b00043 · PubMed

Other PDB entries of the same protein (UniProt Q9NYL2 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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