5MV9: Human Myosin 7a C-terminal MyTH4-FERM domain

Structure of human Myosin 7a C-terminal MyTH4-FERM domain in complex with harmonin-a PDZ3 domain. Determined by X-ray diffraction at 2.6 Å resolution. Released 5 Jul 2017.

Method
X-ray diffraction
Resolution
2.6 Å
Organism
Homo sapiens
Chains
2
Atoms
5,073
Mol. weight
75.43 kDa
Released
5 Jul 2017

Explore 5MV9 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

5MV9 contains 33 α-helices and 22 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 29 helices, 16 β-strands

ElementResiduesLengthSheet
α-helix1708-17125
α-helix1715-17217
β-strand172211
α-helix1723-17264
β-strand175711
α-helix1758-17603
α-helix1764-178017
α-helix1794-180512
α-helix1808-182114
α-helix1827-184115
α-helix1845-18473
α-helix1851-18599
α-helix1867-188014
α-helix1886-18883
α-helix1889-18968
β-strand1902-190872
β-strand1912-191872
β-strand192313
α-helix1924-193411
β-strand1943-194972
β-strand1953-195532
α-helix1956-19572
β-strand196113
α-helix1962-197514
β-strand1989-199572
α-helix2007-20082
α-helix2009-20146
α-helix2015-202410
α-helix2031-204616
α-helix2053-20553
α-helix2057-20593
α-helix2060-20634
α-helix2069-20713
α-helix2074-208512
α-helix2086-20883
α-helix2093-210412
β-strand2113-211974
β-strand2128-213474
β-strand2137-214154
β-strand2148-215254
α-helix2154-21563
β-strand2157-216264
β-strand2166-217164
β-strand2179-218354
α-helix2187-220418
Chain B: 4 helices, 6 β-strands
ElementResiduesLengthSheet
β-strand453-45865
β-strand466-47165
β-strand478-48475
α-helix490-4934
α-helix5001
β-strand501-50555
β-strand508-50925
α-helix515-52713
β-strand533-53865
α-helix539-5424

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Unconventional myosin-VIIaAprotein527Homo sapiensQ13402 (AlphaFold model)
cDNA FLJ51329, highly similar to HarmoninBprotein130Homo sapiensQ9Y6N9 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>5MV9_1 Unconventional myosin-VIIa (chains A)
MGSSHHHHHHSSGTAEPEVRAKPYTLEEFSYDYFRPPPKHTLSRVMVSKARGKDRLWSHT
REPLKQALLKKLLGSEELSQEACLAFIAVLKYMGDYPSKRTRSVNELTDQIFEGPLKAEP
LKDEAYVQILKQLTDNHIRYSEERGWELLWLCTGLFPPSNILLPHVQRFLQSRKHCPLAI
DCLQRLQKALRNGSRKYPPHLVEVEAIQHKTTQIFHKVYFPDDTDEAFEVESSTKAKDFC
QNIATRLLLKSSEGFSLFVKIADKVLSVPENDFFFDFVRHLTDWIKKARPIKDGIVPSLT
YQVFFMKKLWTTTVPGKDPMADSIFHYYQELPKYLRGYHKCTREEVLQLGALIYRVKFEE
DKSYFPSIPKLLRELVPQDLIRQVSPDDWKRSIVAYFNKHAGKSKEEAKLAFLKLIFKWP
TFGSAFFEVKQTTEPNFPEILLIAINKYGVSLIDPKTKDILTTHPFTKISNWSSGNTYFH
ITIGNLVRGSKLLCETSLGYKMDDLLTSYISQMLTAMSKQRGSRSGK
Sequence of entity 2 (B), FASTA
>5MV9_2 cDNA FLJ51329, highly similar to Harmonin (chains B)
GAMGSQDFRKYEEGFDPYSMFTPEQIMGKDVRLLRIKKEGSLDLALEGGVDSPIGKVVVS
AVYERGAAERHGGIVKGDEIMAINGKIVTDYTLAEADAALQKAWNQGGDWIDLVVAVCPP
KEYDDELTFF

Primary citation

Myosin 7 and its adaptors link cadherins to actin. Yu, I.M., Planelles-Herrero, V.J., Sourigues, Y. et al. Nat Commun (2017) 8:15864-15864. DOI 10.1038/ncomms15864 · PubMed

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