5NBF: ENAH EVH1

ENAH EVH1 in complex with Ac-[2-Cl-F]-[ProM-2]-[ProM-3]-OH. Determined by X-ray diffraction at 1.15 Å resolution. Released 24 May 2017.

Method
X-ray diffraction
Resolution
1.15 Å
Organism
Homo sapiens
Chains
1
Atoms
1,197
Mol. weight
13.45 kDa
Ligands
8S8
Released
24 May 2017

Explore 5NBF in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

5NBF contains 2 α-helices and 8 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 2 helices, 8 β-strands

ElementResiduesLengthSheet
β-strand3-17151
β-strand22-2541
α-helix26-283
β-strand32-4091
β-strand45-5281
β-strand58-6361
β-strand7111
β-strand77-8151
β-strand86-9161
α-helix94-11017

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Protein enabled homologAprotein113Homo sapiensQ8N8S7 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>5NBF_1 Protein enabled homolog (chains A)
GSMSEQSICQARAAVMVYDDANKKWVPAGGSTGFSRVHIYHHTGNNTFRVVGRKIQDHQV
VINCAIPKGLKYNQATQTFHQWRDARQVYGLNFGSKEDANVFASAMMHALEVL

Ligands and cofactors

IDNameFormulaCopies
8S8(3~{S},6~{S},7~{R},9~{a}~{R})-6-[[(3~{S},6~{R},8~{a}~{S})-1'-[(2~{S})-2-acetami…C34 H40 Cl N5 O71

Water and common crystallization additives (SO4, NO3) are not listed.

Primary citation

Designed nanomolar small-molecule inhibitors of Ena/VASP EVH1 interaction impair invasion and extravasation of breast cancer cells. Barone, M., Muller, M., Chiha, S. et al. Proc Natl Acad Sci U S A (2020) 117:29684-29690. DOI 10.1073/pnas.2007213117 · PubMed

Other PDB entries of the same protein (UniProt Q8N8S7 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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