5NHQ: Agnoprotein

Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein. Determined by solution NMR. Released 26 Apr 2017.

Method
Solution NMR
Organism
JC polyomavirus
Chains
1
Atoms
568
Mol. weight
8.1 kDa
Released
26 Apr 2017

Explore 5NHQ in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

5NHQ contains 2 α-helices and 0 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 2 helices, 0 β-strands

ElementResiduesLengthSheet
α-helix6-105
α-helix25-4117

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
AgnoproteinAprotein71JC polyomavirusP03086 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>5NHQ_1 Agnoprotein (chains A)
MVLRQLSRKASVKVSKTWSGTKKRAQRILIFLLEFLLDFCTGEDSVDGKKRQRHSGLTEQ
TYSALPEPKAT

Primary citation

Nuclear Magnetic Resonance Structure of the Human Polyoma JC Virus Agnoprotein. Coric, P., Saribas, A.S., Abou-Gharbia, M. et al. J Cell Biochem (2017) 118:3268-3280. DOI 10.1002/jcb.25977 · PubMed

Other PDB entries of the same protein (UniProt P03086 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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