S. cerevisiae UBC13 - MMs2 complex. Determined by X-ray diffraction at 2.0 Å resolution. Released 2 Aug 2017.
Explore 5OJW in 3D Show helices and sheets RCSB PDB PDBe
5OJW contains 17 α-helices and 18 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 4-5 | 2 | |
| α-helix | 6-17 | 12 | |
| α-helix | 19-20 | 2 | |
| β-strand | 23-28 | 6 | 1 |
| β-strand | 31-40 | 10 | 1 |
| α-helix | 41-42 | 2 | |
| β-strand | 50-57 | 8 | 1 |
| β-strand | 68-71 | 4 | 1 |
| β-strand | 77 | 1 | 2 |
| β-strand | 80 | 1 | 2 |
| β-strand | 85 | 1 | 1 |
| β-strand | 86 | 1 | 2 |
| α-helix | 89-91 | 3 | |
| α-helix | 101-113 | 13 | |
| α-helix | 123-131 | 9 | |
| α-helix | 133-147 | 15 | |
| β-strand | 149-150 | 2 | 1 |
| α-helix | 151 | 1 |
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 6-18 | 13 | |
| β-strand | 26-30 | 5 | 3 |
| β-strand | 40-46 | 7 | 3 |
| α-helix | 47-48 | 2 | |
| β-strand | 57-63 | 7 | 3 |
| α-helix | 72-73 | 2 | |
| β-strand | 74-77 | 4 | 3 |
| β-strand | 79 | 1 | 4 |
| β-strand | 86 | 1 | 5 |
| β-strand | 92 | 1 | 3 |
| β-strand | 93 | 1 | 5 |
| α-helix | 94 | 1 | |
| α-helix | 98-101 | 4 | |
| α-helix | 109-120 | 12 | |
| α-helix | 123-126 | 4 | |
| α-helix | 131-132 | 2 | |
| β-strand | 136 | 1 | 4 |
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|---|---|---|---|---|
| Ubiquitin-conjugating enzyme E2 13 | A | protein | 152 | Saccharomyces cerevisiae | P52490 (AlphaFold model) |
| Ubiquitin-conjugating enzyme variant MMS2 | B | protein | 137 | Saccharomyces cerevisiae | P53152 (AlphaFold model) |
>5OJW_1 Ubiquitin-conjugating enzyme E2 13 (chains A) MASLPKRIIKETEKLVSDPVPGITAEPHDDNLRYFQVTIEGPEQSPYEDGIFELELYLPD DYPMEAPKVRFLTKIYHPNIDRLGRICLDVLKTNWSPALQIRTVLLSIQALLASPNPNDP LANDVAEDWIKNEQGAKAKAREWTKLYAKKKP
>5OJW_2 Ubiquitin-conjugating enzyme variant MMS2 (chains B) MSKVPRNFRLLEELEKGEKGFGPESCSYGLADSDDITMTKWNGTILGPPHSNHENRIYSL SIDCGPNYPDSPPKVTFISKINLPCVNPTTGEVQTDFHTLRDWKRAYTMETLLLDLRKEM ATPANKKLRQPKEGETF
S. cerevisiae UBC13 - MMs2 complex. Sharon, I., Rathi, R., Levin-Kravets, O. et al. To be published.
Other PDB entries of the same protein (UniProt P52490 (AlphaFold model), which also has an AlphaFold model), best resolution first:
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