6ELZ: 60S ribosomal protein L13-A
State E (TAP-Flag-Ytm1 E80A) - Visualizing the assembly pathway of nucleolar pre-60S ribosomes. Determined by electron microscopy at 3.3 Å resolution. Released 27 Dec 2017.
- Method
- Electron microscopy
- Resolution
- 3.3 Å
- Organism
- Saccharomyces cerevisiae S288c
- Chains
- 54
- Atoms
- 134,887
- Mol. weight
- 2788.71 kDa
- Ligands
- ZN
- Released
- 27 Dec 2017
Explore 6ELZ in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
6ELZ contains 427 α-helices and 444 β-strands across 51 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain a: 3 helices, 6 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 72-74 | 3 | 121 |
| α-helix | 87-91 | 5 | |
| β-strand | 101-103 | 3 | 122 |
| α-helix | 104-107 | 4 | |
| β-strand | 111-113 | 3 | 121 |
| β-strand | 124-127 | 4 | 122 |
| β-strand | 129-130 | 2 | 121 |
| α-helix | 132-141 | 10 | |
| β-strand | 145-147 | 3 | 122 |
Chain A: 4 helices, 17 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 33-37 | 5 | 26 |
| β-strand | 38 | 1 | 27 |
| α-helix | 43-55 | 13 | |
| β-strand | 59-61 | 3 | 26 |
| β-strand | 65 | 1 | 27 |
| α-helix | 74-81 | 8 | |
| β-strand | 85-90 | 6 | 26 |
| β-strand | 98-102 | 5 | 26 |
| β-strand | 110-113 | 4 | 26 |
| β-strand | 118 | 1 | 28 |
| β-strand | 130 | 1 | 29 |
| β-strand | 133 | 1 | 30 |
| β-strand | 136-138 | 3 | 31 |
| α-helix | 141-143 | 3 | |
| α-helix | 147-158 | 12 | |
| β-strand | 170 | 1 | 30 |
| β-strand | 175-182 | 8 | 31 |
| β-strand | 185-195 | 11 | 31 |
| β-strand | 210-221 | 12 | 31 |
| β-strand | 222-229 | 8 | 26 |
| β-strand | 232-237 | 6 | 26 |
Chain b: 22 helices, 8 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 16-27 | 12 | |
| α-helix | 39-67 | 29 | |
| α-helix | 71-73 | 3 | |
| α-helix | 76-85 | 10 | |
| α-helix | 88-116 | 29 | |
| α-helix | 122-141 | 20 | |
| α-helix | 146-157 | 12 | |
| β-strand | 168-174 | 7 | 71 |
| α-helix | 180-185 | 6 | |
| β-strand | 206-210 | 5 | 71 |
| β-strand | 215-220 | 6 | 71 |
| α-helix | 234-245 | 12 | |
| β-strand | 250-254 | 5 | 71 |
| α-helix | 259-261 | 3 | |
| α-helix | 264-274 | 11 | |
| β-strand | 284-287 | 4 | 71 |
| α-helix | 304-306 | 3 | |
| α-helix | 309-311 | 3 | |
| β-strand | 317-319 | 3 | 71 |
| α-helix | 327-341 | 15 | |
| α-helix | 380-383 | 4 | |
| α-helix | 385-387 | 3 | |
| α-helix | 396-398 | 3 | |
| α-helix | 399-405 | 7 | |
| α-helix | 412-414 | 3 | |
| α-helix | 425-427 | 3 | |
| β-strand | 435-436 | 2 | 72 |
| β-strand | 439-440 | 2 | 72 |
| α-helix | 441-444 | 4 | |
| α-helix | 449-464 | 16 | |
Chain B: 11 helices, 22 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 27-29 | 3 | |
| β-strand | 36 | 1 | 6 |
| α-helix | 40-41 | 2 | |
| β-strand | 43 | 1 | 7 |
| β-strand | 45-47 | 3 | 8 |
| β-strand | 49-50 | 2 | 9 |
| β-strand | 54-60 | 7 | 9 |
| β-strand | 70-80 | 11 | 9 |
| β-strand | 84-95 | 12 | 10 |
| β-strand | 98-106 | 9 | 10 |
| α-helix | 112-117 | 6 | |
| α-helix | 131-137 | 7 | |
| α-helix | 144-153 | 10 | |
| β-strand | 157-163 | 7 | 10 |
| α-helix | 176-177 | 2 | |
| β-strand | 178-182 | 5 | 10 |
| β-strand | 183 | 1 | 7 |
| β-strand | 185 | 1 | 6 |
| α-helix | 188-196 | 9 | |
| β-strand | 202-203 | 2 | 10 |
| β-strand | 214-221 | 8 | 8 |
| β-strand | 226-227 | 2 | 11 |
| β-strand | 268-269 | 2 | 11 |
| β-strand | 273-281 | 9 | 8 |
| β-strand | 282-285 | 4 | 9 |
| α-helix | 307 | 1 | |
| β-strand | 321-325 | 5 | 9 |
| β-strand | 334 | 1 | 9 |
| β-strand | 337-339 | 3 | 8 |
| α-helix | 348-351 | 4 | |
| α-helix | 353-354 | 2 | |
| β-strand | 356-359 | 4 | 9 |
| α-helix | 373-380 | 8 | |
Chain c: 4 helices, 4 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 10-20 | 11 | |
| β-strand | 23-25 | 3 | 73 |
| α-helix | 27-36 | 10 | |
| β-strand | 41-44 | 4 | 73 |
| α-helix | 50-63 | 14 | |
| β-strand | 66-69 | 4 | 73 |
| α-helix | 74-81 | 8 | |
| β-strand | 89-92 | 4 | 73 |
Chain C: 19 helices, 11 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 6-9 | 4 | 13 |
| β-strand | 15-20 | 6 | 13 |
| α-helix | 32-43 | 12 | |
| β-strand | 62-63 | 2 | 14 |
| β-strand | 76-77 | 2 | 14 |
| β-strand | 88 | 1 | 14 |
| α-helix | 97-99 | 3 | |
| α-helix | 115-127 | 13 | |
| α-helix | 134-138 | 5 | |
| β-strand | 150-152 | 3 | 13 |
| α-helix | 154-156 | 3 | |
| α-helix | 162-172 | 11 | |
| α-helix | 175-180 | 6 | |
| β-strand | 186-187 | 2 | 15 |
| β-strand | 199-200 | 2 | 15 |
| β-strand | 206-209 | 4 | 13 |
| α-helix | 215-218 | 4 | |
| β-strand | 226-229 | 4 | 13 |
| α-helix | 235-238 | 4 | |
| α-helix | 240-242 | 3 | |
| β-strand | 248-251 | 4 | 13 |
| α-helix | 254-262 | 9 | |
| α-helix | 276-279 | 4 | |
| α-helix | 287-290 | 4 | |
| α-helix | 293-298 | 6 | |
| α-helix | 300-302 | 3 | |
| α-helix | 321-326 | 6 | |
| α-helix | 331-336 | 6 | |
| α-helix | 350-352 | 3 | |
| α-helix | 353-359 | 7 | |
Chain d: 6 helices, 7 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 9 | 1 | 76 |
| β-strand | 10 | 1 | 77 |
| β-strand | 12-15 | 4 | 76 |
| α-helix | 16-19 | 4 | |
| α-helix | 25-27 | 3 | |
| α-helix | 28-44 | 17 | |
| β-strand | 48-51 | 4 | 76 |
| α-helix | 53-59 | 7 | |
| α-helix | 60-62 | 3 | |
| β-strand | 70-77 | 8 | 76 |
| β-strand | 90-95 | 6 | 76 |
| β-strand | 108 | 1 | 77 |
| α-helix | 109-111 | 3 | |
Chain D: 8 helices, 9 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 268 | 1 | 55 |
| β-strand | 269 | 1 | 56 |
| α-helix | 275-286 | 12 | |
| β-strand | 292-296 | 5 | 57 |
| α-helix | 302-311 | 10 | |
| β-strand | 317-318 | 2 | 57 |
| α-helix | 325-336 | 12 | |
| β-strand | 343-346 | 4 | 57 |
| β-strand | 360-363 | 4 | 57 |
| α-helix | 366-367 | 2 | |
| α-helix | 372-377 | 6 | |
| β-strand | 389-391 | 3 | 57 |
| β-strand | 393 | 1 | 56 |
| β-strand | 414 | 1 | 55 |
| α-helix | 427-433 | 7 | |
| α-helix | 438-455 | 18 | |
| α-helix | 468-474 | 7 | |
43 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| 25S ribosomal RNA | 1 | RNA | 3396 | Saccharomyces cerevisiae S288c | |
| 5.8S ribosomal RNA | 2 | RNA | 158 | Saccharomyces cerevisiae S288c | |
| Internal transcribed spacer 2 | 6 | RNA | 232 | Saccharomyces cerevisiae S288c | |
| 60S ribosomal protein L13-A | L | protein | 199 | Saccharomyces cerevisiae S288c | Q12690 (AlphaFold model) |
| 60S ribosomal protein L15-A | N | protein | 204 | Saccharomyces cerevisiae S288c | P05748 (AlphaFold model) |
| 60S ribosomal protein L18-A | Q | protein | 186 | Saccharomyces cerevisiae S288c | P0CX49 (AlphaFold model) |
| 60S ribosomal protein L19-A | R | protein | 189 | Saccharomyces cerevisiae S288c | P0CX82 (AlphaFold model) |
| 60S ribosomal protein L20-A | S | protein | 172 | Saccharomyces cerevisiae S288c | P0CX23 |
| 60S ribosomal protein L21-A | T | protein | 160 | Saccharomyces cerevisiae S288c | Q02753 |
| 60S ribosomal protein L22-A | U | protein | 121 | Saccharomyces cerevisiae S288c | P05749 |
| 60S ribosomal protein L27-A | Z | protein | 136 | Saccharomyces cerevisiae S288c | P0C2H6 |
| 60S ribosomal protein L30 | c | protein | 105 | Saccharomyces cerevisiae S288c | P14120 |
42 more molecules are not listed.
Sequence of entity 1 (1), FASTA
>6ELZ_1 25S ribosomal RNA (chains 1)
GUUUGACCUCAAAUCAGGUAGGAGUACCCGCUGAACUUAAGCAUAUCAAUAAGCGGAGGA
AAAGAAACCAACCGGGAUUGCCUUAGUAACGGCGAGUGAAGCGGCAAAAGCUCAAAUUUG
AAAUCUGGUACCUUCGGUGCCCGAGUUGUAAUUUGGAGAGGGCAACUUUGGGGCCGUUCC
UUGUCUAUGUUCCUUGGAACAGGACGUCAUAGAGGGUGAGAAUCCCGUGUGGCGAGGAGU
GCGGUUCUUUGUAAAGUGCCUUCGAAGAGUCGAGUUGUUUGGGAAUGCAGCUCUAAGUGG
GUGGUAAAUUCCAUCUAAAGCUAAAUAUUGGCGAGAGACCGAUAGCGAACAAGUACAGUG
AUGGAAAGAUGAAAAGAACUUUGAAAAGAGAGUGAAAAAGUACGUGAAAUUGUUGAAAGG
GAAGGGCAUUUGAUCAGACAUGGUGUUUUGUGCCCUCUGCUCCUUGUGGGUAGGGGAAUC
UCGCAUUUCACUGGGCCAGCAUCAGUUUUGGUGGCAGGAUAAAUCCAUAGGAAUGUAGCU
UGCCUCGGUAAGUAUUAUAGCCUGUGGGAAUACUGCCAGCUGGGACUGAGGACUGCGACG
UAAGUCAAGGAUGCUGGCAUAAUGGUUAUAUGCCGCCCGUCUUGAAACACGGACCAAGGA
GUCUAACGUCUAUGCGAGUGUUUGGGUGUAAAACCCAUACGCGUAAUGAAAGUGAACGUA
GGUUGGGGCCUCGCAAGAGGUGCACAAUCGACCGAUCCUGAUGUCUUCGGAUGGAUUUGA
GUAAGAGCAUAGCUGUUGGGACCCGAAAGAUGGUGAACUAUGCCUGAAUAGGGUGAAGCC
AGAGGAAACUCUGGUGGAGGCUCGUAGCGGUUCUGACGUGCAAAUCGAUCGUCGAAUUUG
GGUAUAGGGGCGAAAGACUAAUCGAACCAUCUAGUAGCUGGUUCCUGCCGAAGUUUCCCU
CAGGAUAGCAGAAGCUCGUAUCAGUUUUAUGAGGUAAAGCGAAUGAUUAGAGGUUCCGGG
GUCGAAAUGACCUUGACCUAUUCUCAAACUUUAAAUAUGUAAGAAGUCCUUGUUACUUAA
UUGAACGUGGACAUUUGAAUGAAGAGCUUUUAGUGGGCCAUUUUUGGUAAGCAGAACUGG
CGAUGCGGGAUGAACCGAACGUAGAGUUAAGGUGCCGGAAUACACGCUCAUCAGACACCA
CAAAAGGUGUUAGUUCAUCUAGACAGCCGGACGGUGGCCAUGGAAGUCGGAAUCCGCUAA
GGAGUGUGUAACAACUCACCGGCCGAAUGAACUAGCCCUGAAAAUGGAUGGCGCUCAAGC
GUGUUACCUAUACUCUACCGUCAGGGUUGAUAUGAUGCCCUGACGAGUAGGCAGGCGUGG
AGGUCAGUGACGAAGCCUAGACCGUAAGGUCGGGUCGAACGGCCUCUAGUGCAGAUCUUG
GUGGUAGUAGCAAAUAUUCAAAUGAGAACUUUGAAGACUGAAGUGGGGAAAGGUUCCACG
UCAACAGCAGUUGGACGUGGGUUAGUCGAUCCUAAGAGAUGGGGAAGCUCCGUUUCAAAG
GCCUGAUUUUAUGCAGGCCACCAUCGAAAGGGAAUCCGGUUAAGAUUCCGGAACCUGGAU
AUGGAUUCUUCACGGUAACGUAACUGAAUGUGGAGACGUCGGCGCGAGCCCUGGGAGGAG
UUAUCUUUUCUUCUUAACAGCUUAUCACCCCGGAAUUGGUUUAUCCGGAGAUGGGGUCUU
AUGGCUGGAAGAGGCCAGCACCUUUGCUGGCUCCGGUGCGCUUGUGACGGCCCGUGAAAA
UCCACAGGAAGGAAUAGUUUUCAUGCCAGGUCGUACUGAUAACCGCAGCAGGUCUCCAAG
GUGAACAGCCUCUAGUUGAUAGAAUAAUGUAGAUAAGGGAAGUCGGCAAAAUAGAUCCGU
AACUUCGGGAUAAGGAUUGGCUCUAAGGGUCGGGUAGUGAGGGCCUUGGUCAGACGCAGC
GGGCGUGCUUGUGGACUGCUUGGUGGGGCUUGCUCUGCUAGGCGGACUACUUGCGUGCCU
UGUUGUAGACGGCCUUGGUAGGUCUCUUGUAGACCGUCGCUUGCUACAAUUAACGAUCAA
CUUAGAACUGGUACGGACAAGGGGAAUCUGACUGUCUAAUUAAAACAUAGCAUUGCGAUG
GUCAGAAAGUGAUGUUGACGCAAUGUGAUUUCUGCCCAGUGCUCUGAAUGUCAAAGUGAA
GAAAUUCAACCAAGCGCGGGUAAACGGCGGGAGUAACUAUGACUCUCUUAAGGUAGCCAA
AUGCCUCGUCAUCUAAUUAGUGACGCGCAUGAAUGGAUUAACGAGAUUCCCACUGUCCCU
AUCUACUAUCUAGCGAAACCACAGCCAAGGGAACGGGCUUGGCAGAAUCAGCGGGGAAAG
AAGACCCUGUUGAGCUUGACUCUAGUUUGACAUUGUGAAGAGACAUAGAGGGUGUAGAAU
AAGUGGGAGCUUCGGCGCCAGUGAAAUACCACUACCUUUAUAGUUUCUUUACUUAUUCAA
UGAAGCGGAGCUGGAAUUCAUUUUCCACGUUCUAGCAUUCAAGGUCCCAUUCGGGGCUGA
UCCGGGUUGAAGACAUUGUCAGGUGGGGAGUUUGGCUGGGGCGGCACAUCUGUUAAACGA
UAACGCAGAUGUCCUAAGGGGGGCUCAUGGAGAACAGAAAUCUCCAGUAGAACAAAAGGG
UAAAAGCCCCCUUGAUUUUGAUUUUCAGUGUGAAUACAAACCAUGAAAGUGUGGCCUAUC
GAUCCUUUAGUCCCUCGGAAUUUGAGGCUAGAGGUGCCAGAAAAGUUACCACAGGGAUAA
CUGGCUUGUGGCAGUCAAGCGUUCAUAGCGACAUUGCUUUUUGAUUCUUCGAUGUCGGCU
CUUCCUAUCAUACCGAAGCAGAAUUCGGUAAGCGUUGGAUUGUUCACCCACUAAUAGGGA
ACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUUACCCUACUGAUGAAUGUUA
CCGCAAUAGUAAUUGAACUUAGUACGAGAGGAACAGUUCAUUCGGAUAAUUGGUUUUUGC
GGCUGUCUGAUCAGGCAUUGCCGCGAAGCUACCAUCCGCUGGAUUAUGGCUGAACGCCUC
UAAGUCAGAAUCCAUGCUAGAACGCGGUGAUUUCUUUGCUCCACACAAUAUAGAUGGAUA
CGAAUAAGGCGUCCUUGUGGCGUCGCUGAACCAUAGCAGGCUAGCAACGGUGCACUUGGC
GGAAAGGCCUUGGGUGCUUGCUGGCGAAUUGCAAUGUCAUUUUGCGUGGGGAUAAAUCAU
UUGUAUACGACUUAGAUGUACAACGGGGUAUUGUAAGCAGUAGAGUAGCCUUGUUGUUAC
GAUCUGCUGAGAUUAAGCCUUUGUUGUCUGAUUUGU
Sequence of entity 2 (2), FASTA
>6ELZ_2 5.8S ribosomal RNA (chains 2)
AAACUUUCAACAACGGAUCUCUUGGUUCUCGCAUCGAUGAAGAACGCAGCGAAAUGCGAU
ACGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCC
UUGGUAUUCCAGGGGGCAUGCCUGUUUGAGCGUCAUUU
Sequence of entity 3 (6), FASTA
>6ELZ_3 Internal transcribed spacer 2 (chains 6)
CCUUCUCAAACAUUCUGUUUGGUAGUGAGUGAUACUCUUUGGAGUUAACUUGAAAUUGCU
GGCCUUUUCAUUGGAUGUUUUUUUUCCAAAGAGAGGUUUCUCUGCGUGCUUGAGGUAUAA
UGCAAGUACGGUCGUUUUAGGUUUUACCAACUGCGGCUAAUCUUUUUUUAUACUGAGCGU
AUUGGAACGUUAUCGAUAAGAAGAGAGCGUCUAGGCGAACAAUGUUCUUAAA
Sequence of entity 4 (L), FASTA
>6ELZ_4 60S ribosomal protein L13-A (chains L)
MAISKNLPILKNHFRKHWQERVKVHFDQAGKKVSRRNARATRAAKIAPRPLDLLRPVVRA
PTVKYNRKVRAGRGFTLAEVKAAGLTAAYARTIGIAVDHRRQNRNQEIFDANVQRLKEYQ
SKIIVFPRNGKAPEAEQVLSAAATFPIAQPATDVEARAVQDNGESAFRTLRLARSEKKFR
GIREKRAREKAEAEAEKKK
Sequence of entity 5 (N), FASTA
>6ELZ_5 60S ribosomal protein L15-A (chains N)
MGAYKYLEELQRKKQSDVLRFLQRVRVWEYRQKNVIHRAARPTRPDKARRLGYKAKQGFV
IYRVRVRRGNRKRPVPKGATYGKPTNQGVNELKYQRSLRATAEERVGRRAANLRVLNSYW
VNQDSTYKYFEVILVDPQHKAIRRDARYNWICDPVHKHREARGLTATGKKSRGINKGHKF
NNTKAGRRKTWKRQNTLSLWRYRK
Sequence of entity 6 (Q), FASTA
>6ELZ_6 60S ribosomal protein L18-A (chains Q)
MGIDHTSKQHKRSGHRTAPKSDNVYLKLLVKLYTFLARRTDAPFNKVVLKALFLSKINRP
PVSVSRIARALKQEGAANKTVVVVGTVTDDARIFEFPKTTVAALRFTAGARAKIVKAGGE
CITLDQLAVRAPKGQNTLILRGPRNSREAVRHFGMGPHKGKAPRILSTGRKFERARGRRR
SKGFKV
Sequence of entity 7 (R), FASTA
>6ELZ_7 60S ribosomal protein L19-A (chains R)
MANLRTQKRLAASVVGVGKRKVWLDPNETSEIAQANSRNAIRKLVKNGTIVKKAVTVHSK
SRTRAHAQSKREGRHSGYGKRKGTREARLPSQVVWIRRLRVLRRLLAKYRDAGKIDKHLY
HVLYKESKGNAFKHKRALVEHIIQAKADAQREKALNEEAEARRLKNRAARDRRAQRVAEK
RDALLKEDA
Sequence of entity 8 (S), FASTA
>6ELZ_8 60S ribosomal protein L20-A (chains S)
MAHFKEYQVIGRRLPTESVPEPKLFRMRIFASNEVIAKSRYWYFLQKLHKVKKASGEIVS
INQINEAHPTKVKNFGVWVRYDSRSGTHNMYKEIRDVSRVAAVETLYQDMAARHRARFRS
IHILKVAEIEKTADVKRQYVKQFLTKDLKFPLPHRVQKSTKTFSYKRPSTFY
Sequence of entity 9 (T), FASTA
>6ELZ_9 60S ribosomal protein L21-A (chains T)
MGKSHGYRSRTRYMFQRDFRKHGAVHLSTYLKVYKVGDIVDIKANGSIQKGMPHKFYQGK
TGVVYNVTKSSVGVIINKMVGNRYLEKRLNLRVEHIKHSKCRQEFLERVKANAAKRAEAK
AQGVAVQLKRQPAQPRESRIVSTEGNVPQTLAPVPYETFI
Sequence of entity 10 (U), FASTA
>6ELZ_10 60S ribosomal protein L22-A (chains U)
MAPNTSRKQKIAKTFTVDVSSPTENGVFDPASYAKYLIDHIKVEGAVGNLGNAVTVTEDG
TVVTVVSTAKFSGKYLKYLTKKYLKKNQLRDWIRFVSTKTNEYRLAFYQVTPEEDEEEDE
E
Sequence of entity 11 (Z), FASTA
>6ELZ_11 60S ribosomal protein L27-A (chains Z)
MAKFLKAGKVAVVVRGRYAGKKVVIVKPHDEGSKSHPFGHALVAGIERYPLKVTKKHGAK
KVAKRTKIKPFIKVVNYNHLLPTRYTLDVEAFKSVVSTETFEQPSQREEAKKVVKKAFEE
RHQAGKNQWFFSKLRF
Sequence of entity 12 (c), FASTA
>6ELZ_12 60S ribosomal protein L30 (chains c)
MAPVKSQESINQKLALVIKSGKYTLGYKSTVKSLRQGKSKLIIIAANTPVLRKSELEYYA
MLSKTKVYYFQGGNNELGTAVGKLFRVGVVSILEAGDSDILTTLA
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| ZN | Zinc ion | Zn | 1 |
Primary citation
Visualizing the Assembly Pathway of Nucleolar Pre-60S Ribosomes. Kater, L., Thoms, M., Barrio-Garcia, C. et al. Cell (2017) 171:1599-1610.e14. DOI 10.1016/j.cell.2017.11.039 · PubMed
Other PDB entries of the same protein (UniProt Q12690 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 9PN5 1.75 Å, Composite map of hypomethylated 80S ribosome treated with hygromycin B
- 8CCS 1.97 Å, 80S S. cerevisiae ribosome with ligands in hybrid-1 pre-translocation (PRE-H1) complex
- 8CDR 2.04 Å, Translocation intermediate 2 (TI-2) of 80S S. cerevisiae ribosome with ligands and eEF2…
- 8CEH 2.05 Å, Translocation intermediate 4 (TI-4) of 80S S. cerevisiae ribosome with ligands and eEF2…
- 8P8N 2.15 Å, Mouse RPL39 integrated into the yeast 60S ribosomal subunit
- 8PFR 2.15 Å, Mouse RPL39L integrated into the yeast 60S ribosomal subunit
- 8EVT 2.2 Å, Hypopseudouridylated yeast 80S bound with Taura syndrome virus (TSV) internal ribosome…
- 8T2Y 2.2 Å, Hypomethylated yeast 80S bound with cycloheximide, P-site tRNA, and A-site tRNA,…
- 8P8U 2.23 Å, Yeast 60S ribosomal subunit
- 8CGN 2.28 Å, Non-rotated 80S S. cerevisiae ribosome with ligands
- 8ZHC 2.3 Å, pre-frameshift complex of yeast 80S ribosome with eRF1 and mRNA of WNV
- 7UOO 2.34 Å, Nucleoplasmic pre-60S intermediate of the Nog2 containing pre-rotation state
Browse structure collections
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