6HTS: Human INO80 complex
Cryo-EM structure of the human INO80 complex bound to nucleosome. Determined by electron microscopy at 4.8 Å resolution. Released 7 Nov 2018.
- Method
- Electron microscopy
- Resolution
- 4.8 Å
- Organisms
- Homo sapiens, synthetic construct
- Chains
- 19
- Atoms
- 38,744
- Mol. weight
- 811.32 kDa
- Ligands
- ZN, ADP
- Released
- 7 Nov 2018
Explore 6HTS in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
6HTS contains 239 α-helices and 208 β-strands across 17 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain A: 27 helices, 27 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 13-14 | 2 | |
| β-strand | 15 | 1 | 1 |
| β-strand | 26 | 1 | 2 |
| α-helix | 31 | 1 | |
| β-strand | 32 | 1 | 2 |
| α-helix | 33 | 1 | |
| β-strand | 35-36 | 2 | 3 |
| β-strand | 39-40 | 2 | 3 |
| α-helix | 43-58 | 16 | |
| β-strand | 61 | 1 | 4 |
| β-strand | 65-69 | 5 | 5 |
| α-helix | 76-87 | 12 | |
| β-strand | 93-97 | 5 | 5 |
| α-helix | 108-119 | 12 | |
| β-strand | 121-134 | 14 | 6 |
| β-strand | 138-140 | 3 | 6 |
| β-strand | 157-163 | 7 | 6 |
| β-strand | 166-172 | 7 | 6 |
| α-helix | 174-182 | 9 | |
| β-strand | 189-194 | 6 | 6 |
| β-strand | 200-206 | 7 | 6 |
| α-helix | 207-211 | 5 | |
| β-strand | 215 | 1 | 7 |
| β-strand | 220-221 | 2 | 6 |
| α-helix | 222-225 | 4 | |
| β-strand | 229-239 | 11 | 6 |
| α-helix | 240-248 | 9 | |
| α-helix | 260-262 | 3 | |
| α-helix | 265-266 | 2 | |
| α-helix | 270-272 | 3 | |
| α-helix | 273-289 | 17 | |
| β-strand | 292-295 | 4 | 6 |
| β-strand | 298-302 | 5 | 5 |
| α-helix | 304-306 | 3 | |
| α-helix | 309-320 | 12 | |
| α-helix | 324-325 | 2 | |
| β-strand | 326-331 | 6 | 5 |
| β-strand | 333 | 1 | 8 |
| β-strand | 336-337 | 2 | 9 |
| α-helix | 338 | 1 | |
| β-strand | 345-346 | 2 | 9 |
| α-helix | 347-349 | 3 | |
| α-helix | 352-357 | 6 | |
| β-strand | 359-362 | 4 | 5 |
| α-helix | 365-367 | 3 | |
| α-helix | 368-382 | 15 | |
| β-strand | 386 | 1 | 10 |
| α-helix | 388-400 | 13 | |
| α-helix | 403-408 | 6 | |
| α-helix | 410-420 | 11 | |
| β-strand | 425 | 1 | 10 |
| α-helix | 427-436 | 10 | |
| β-strand | 438 | 1 | 11 |
| α-helix | 440-450 | 11 | |
Chain B: 18 helices, 22 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 22 | 1 | 12 |
| β-strand | 42-43 | 2 | 13 |
| β-strand | 46-47 | 2 | 13 |
| α-helix | 50-65 | 16 | |
| β-strand | 68 | 1 | 1 |
| β-strand | 72-77 | 6 | 11 |
| α-helix | 83-94 | 12 | |
| β-strand | 100-104 | 5 | 11 |
| α-helix | 115-126 | 12 | |
| β-strand | 128-148 | 21 | 7 |
| β-strand | 158-164 | 7 | 7 |
| β-strand | 169-174 | 6 | 7 |
| α-helix | 176-184 | 9 | |
| β-strand | 191-196 | 6 | 7 |
| β-strand | 202-207 | 6 | 7 |
| α-helix | 226-228 | 3 | |
| β-strand | 233-243 | 11 | 7 |
| α-helix | 244-252 | 9 | |
| α-helix | 256-262 | 7 | |
| α-helix | 270-286 | 17 | |
| β-strand | 290-292 | 3 | 7 |
| β-strand | 295-299 | 5 | 11 |
| β-strand | 305 | 1 | 14 |
| α-helix | 306-317 | 12 | |
| β-strand | 323-328 | 6 | 11 |
| β-strand | 333-334 | 2 | 15 |
| α-helix | 335 | 1 | |
| β-strand | 336 | 1 | 14 |
| β-strand | 341-342 | 2 | 15 |
| α-helix | 343-345 | 3 | |
| α-helix | 348-351 | 4 | |
| β-strand | 355-359 | 5 | 11 |
| α-helix | 360-363 | 4 | |
| α-helix | 364-378 | 15 | |
| α-helix | 384-396 | 13 | |
| α-helix | 399-416 | 18 | |
| α-helix | 423-432 | 10 | |
| β-strand | 434 | 1 | 16 |
| α-helix | 436-445 | 10 | |
| β-strand | 451 | 1 | 17 |
Chain C: 26 helices, 28 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 13-14 | 2 | |
| β-strand | 15 | 1 | 18 |
| β-strand | 26 | 1 | 19 |
| α-helix | 31 | 1 | |
| β-strand | 32 | 1 | 19 |
| α-helix | 33 | 1 | |
| β-strand | 35-36 | 2 | 20 |
| β-strand | 39-40 | 2 | 20 |
| α-helix | 43-58 | 16 | |
| β-strand | 61 | 1 | 12 |
| β-strand | 65-69 | 5 | 16 |
| α-helix | 76-87 | 12 | |
| β-strand | 93-97 | 5 | 16 |
| α-helix | 108-119 | 12 | |
| β-strand | 121-140 | 20 | 21 |
| β-strand | 143 | 1 | 22 |
| β-strand | 153 | 1 | 22 |
| β-strand | 157-162 | 6 | 21 |
| β-strand | 167-172 | 6 | 21 |
| α-helix | 174-182 | 9 | |
| β-strand | 189-194 | 6 | 21 |
| β-strand | 200-206 | 7 | 21 |
| α-helix | 207-211 | 5 | |
| β-strand | 215 | 1 | 23 |
| β-strand | 220-221 | 2 | 21 |
| α-helix | 222-224 | 3 | |
| β-strand | 229-239 | 11 | 21 |
| α-helix | 240-248 | 9 | |
| α-helix | 256-263 | 8 | |
| α-helix | 270-272 | 3 | |
| α-helix | 273-289 | 17 | |
| β-strand | 292-295 | 4 | 21 |
| β-strand | 298-302 | 5 | 16 |
| α-helix | 304-306 | 3 | |
| α-helix | 309-320 | 12 | |
| α-helix | 324-325 | 2 | |
| β-strand | 326-331 | 6 | 16 |
| β-strand | 333 | 1 | 17 |
| β-strand | 336-337 | 2 | 24 |
| α-helix | 338 | 1 | |
| β-strand | 345-346 | 2 | 24 |
| α-helix | 347-349 | 3 | |
| α-helix | 352-357 | 6 | |
| β-strand | 359-362 | 4 | 16 |
| α-helix | 365-367 | 3 | |
| α-helix | 368-381 | 14 | |
| β-strand | 386 | 1 | 25 |
| α-helix | 388-400 | 13 | |
| α-helix | 403-408 | 6 | |
| α-helix | 410-420 | 11 | |
| β-strand | 425 | 1 | 25 |
| α-helix | 427-436 | 10 | |
| β-strand | 438 | 1 | 26 |
| α-helix | 440-449 | 10 | |
Chain D: 22 helices, 22 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 22 | 1 | 27 |
| β-strand | 33 | 1 | 28 |
| α-helix | 38 | 1 | |
| β-strand | 39 | 1 | 28 |
| α-helix | 40 | 1 | |
| β-strand | 42-43 | 2 | 29 |
| β-strand | 46-47 | 2 | 29 |
| α-helix | 50-65 | 16 | |
| β-strand | 68 | 1 | 18 |
| β-strand | 72-77 | 6 | 26 |
| α-helix | 83-93 | 11 | |
| β-strand | 100-104 | 5 | 26 |
| α-helix | 115-126 | 12 | |
| β-strand | 128-149 | 22 | 23 |
| β-strand | 158-164 | 7 | 23 |
| β-strand | 169-174 | 6 | 23 |
| α-helix | 176-184 | 9 | |
| β-strand | 191-196 | 6 | 23 |
| β-strand | 202-207 | 6 | 23 |
| α-helix | 226-228 | 3 | |
| β-strand | 233-243 | 11 | 23 |
| α-helix | 244-252 | 9 | |
| α-helix | 257-262 | 6 | |
| α-helix | 270-286 | 17 | |
| β-strand | 289-292 | 4 | 23 |
| β-strand | 295-299 | 5 | 26 |
| α-helix | 301-303 | 3 | |
| α-helix | 306-315 | 10 | |
| α-helix | 321-323 | 3 | |
| β-strand | 324-328 | 5 | 26 |
| β-strand | 333-334 | 2 | 30 |
| α-helix | 335 | 1 | |
| β-strand | 341-342 | 2 | 30 |
| α-helix | 343-345 | 3 | |
| α-helix | 348-353 | 6 | |
| β-strand | 355-359 | 5 | 26 |
| α-helix | 360-362 | 3 | |
| α-helix | 364-377 | 14 | |
| α-helix | 386-396 | 11 | |
| α-helix | 399-415 | 17 | |
| α-helix | 423-432 | 10 | |
| β-strand | 434 | 1 | 31 |
| α-helix | 436-445 | 10 | |
| β-strand | 451 | 1 | 32 |
Chain E: 28 helices, 29 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 13-14 | 2 | |
| β-strand | 15 | 1 | 33 |
| β-strand | 26 | 1 | 34 |
| α-helix | 31 | 1 | |
| β-strand | 32 | 1 | 34 |
| α-helix | 33 | 1 | |
| β-strand | 35-36 | 2 | 35 |
| β-strand | 39-40 | 2 | 35 |
| α-helix | 43-58 | 16 | |
| β-strand | 61 | 1 | 27 |
| β-strand | 65-69 | 5 | 31 |
| α-helix | 76-87 | 12 | |
| β-strand | 93-97 | 5 | 31 |
| α-helix | 98-101 | 4 | |
| α-helix | 108-119 | 12 | |
| β-strand | 121-133 | 13 | 36 |
| β-strand | 134 | 1 | 37 |
| β-strand | 137-139 | 3 | 37 |
| β-strand | 152-154 | 3 | 23 |
| β-strand | 157-162 | 6 | 37 |
| β-strand | 167-172 | 6 | 37 |
| α-helix | 175-182 | 8 | |
| β-strand | 189-194 | 6 | 36 |
| β-strand | 200-206 | 7 | 36 |
| α-helix | 207-211 | 5 | |
| β-strand | 215 | 1 | 38 |
| β-strand | 220-221 | 2 | 36 |
| α-helix | 222-225 | 4 | |
| β-strand | 229-239 | 11 | 36 |
| α-helix | 240-248 | 9 | |
| α-helix | 256-263 | 8 | |
| α-helix | 265-266 | 2 | |
| α-helix | 270-272 | 3 | |
| α-helix | 273-289 | 17 | |
| β-strand | 292-295 | 4 | 36 |
| β-strand | 298-302 | 5 | 31 |
| α-helix | 304-306 | 3 | |
| α-helix | 309-319 | 11 | |
| α-helix | 324-325 | 2 | |
| β-strand | 326-331 | 6 | 31 |
| β-strand | 333 | 1 | 32 |
| β-strand | 336-337 | 2 | 39 |
| α-helix | 338 | 1 | |
| β-strand | 345-346 | 2 | 39 |
| α-helix | 347-349 | 3 | |
| α-helix | 352-357 | 6 | |
| β-strand | 359-362 | 4 | 31 |
| α-helix | 365-367 | 3 | |
| α-helix | 368-382 | 15 | |
| β-strand | 386 | 1 | 40 |
| α-helix | 388-400 | 13 | |
| α-helix | 403-408 | 6 | |
| α-helix | 410-420 | 11 | |
| β-strand | 425 | 1 | 40 |
| α-helix | 427-436 | 10 | |
| β-strand | 438 | 1 | 41 |
| α-helix | 440-449 | 10 | |
Chain F: 18 helices, 21 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 22 | 1 | 4 |
| β-strand | 42-43 | 2 | 42 |
| β-strand | 46-47 | 2 | 42 |
| α-helix | 50-65 | 16 | |
| β-strand | 68 | 1 | 33 |
| β-strand | 72-76 | 5 | 41 |
| α-helix | 83-94 | 12 | |
| β-strand | 100-104 | 5 | 41 |
| α-helix | 115-125 | 11 | |
| β-strand | 128-148 | 21 | 38 |
| β-strand | 158-164 | 7 | 38 |
| β-strand | 169-174 | 6 | 38 |
| α-helix | 176-184 | 9 | |
| β-strand | 191-195 | 5 | 38 |
| β-strand | 202-207 | 6 | 38 |
| α-helix | 209-212 | 4 | |
| β-strand | 224 | 1 | 38 |
| α-helix | 226-228 | 3 | |
| β-strand | 233-243 | 11 | 38 |
| α-helix | 244-252 | 9 | |
| α-helix | 256-262 | 7 | |
| α-helix | 270-286 | 17 | |
| β-strand | 290-292 | 3 | 38 |
| β-strand | 295-299 | 5 | 41 |
| α-helix | 306-317 | 12 | |
| β-strand | 323-327 | 5 | 41 |
| β-strand | 332 | 1 | 43 |
| α-helix | 334-335 | 2 | |
| β-strand | 343 | 1 | 43 |
| α-helix | 348-351 | 4 | |
| β-strand | 354-358 | 5 | 41 |
| α-helix | 361-363 | 3 | |
| α-helix | 364-378 | 15 | |
| α-helix | 386-396 | 11 | |
| α-helix | 399-415 | 17 | |
| α-helix | 423-432 | 10 | |
| β-strand | 434 | 1 | 5 |
| α-helix | 436-445 | 10 | |
| β-strand | 451 | 1 | 8 |
Chain G: 35 helices, 24 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 520-534 | 15 | |
| β-strand | 539-541 | 3 | 44 |
| α-helix | 545-547 | 3 | |
| α-helix | 549-557 | 9 | |
| β-strand | 570-573 | 4 | 44 |
| α-helix | 579-589 | 11 | |
| β-strand | 595 | 1 | 44 |
| β-strand | 598 | 1 | 44 |
| α-helix | 602-612 | 11 | |
| β-strand | 626-629 | 4 | 44 |
| α-helix | 631-636 | 6 | |
| α-helix | 638-641 | 4 | |
| β-strand | 648-652 | 5 | 44 |
| α-helix | 654-657 | 4 | |
| α-helix | 663-670 | 8 | |
| β-strand | 675-679 | 5 | 44 |
| α-helix | 688-698 | 11 | |
| α-helix | 728-739 | 12 | |
| β-strand | 743-744 | 2 | 44 |
| α-helix | 756-757 | 2 | |
| β-strand | 760-765 | 6 | 45 |
| α-helix | 769-778 | 10 | |
| α-helix | 810-815 | 6 | |
| β-strand | 828 | 1 | 46 |
| β-strand | 831-833 | 3 | 47 |
| α-helix | 835-837 | 3 | |
| β-strand | 838-839 | 2 | 48 |
| α-helix | 842-846 | 5 | |
| α-helix | 855-863 | 9 | |
| α-helix | 869-877 | 9 | |
| α-helix | 889-893 | 5 | |
| α-helix | 898-907 | 10 | |
| α-helix | 909-930 | 22 | |
| α-helix | 936-937 | 2 | |
| α-helix | 938-941 | 4 | |
| α-helix | 959-964 | 6 | |
| α-helix | 966-971 | 6 | |
| β-strand | 989-990 | 2 | 49 |
| β-strand | 996-997 | 2 | 49 |
| β-strand | 1017-1019 | 3 | 47 |
| α-helix | 1020-1022 | 3 | |
| β-strand | 1024-1025 | 2 | 48 |
| α-helix | 1030-1039 | 10 | |
| α-helix | 1044-1051 | 8 | |
| α-helix | 1055-1064 | 10 | |
| β-strand | 1089 | 1 | 46 |
| α-helix | 1101-1116 | 16 | |
| β-strand | 1120-1123 | 4 | 45 |
| α-helix | 1127-1138 | 12 | |
| β-strand | 1143 | 1 | 50 |
| β-strand | 1146 | 1 | 45 |
| α-helix | 1153-1161 | 9 | |
| β-strand | 1169 | 1 | 50 |
| β-strand | 1171-1174 | 4 | 45 |
| α-helix | 1176-1179 | 4 | |
| β-strand | 1190-1193 | 4 | 45 |
| α-helix | 1202-1208 | 7 | |
| β-strand | 1220-1226 | 7 | 45 |
| α-helix | 1231-1247 | 17 | |
Chain H: 20 helices, 16 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 33-37 | 5 | 51 |
| β-strand | 41-45 | 5 | 51 |
| β-strand | 59-62 | 4 | 51 |
| β-strand | 98-99 | 2 | 52 |
| β-strand | 102-103 | 2 | 52 |
| α-helix | 106-120 | 15 | |
| β-strand | 132-135 | 4 | 51 |
| α-helix | 142-151 | 10 | |
| α-helix | 152-156 | 5 | |
| β-strand | 161-164 | 4 | 51 |
| α-helix | 166-174 | 9 | |
| β-strand | 183-188 | 6 | 53 |
| β-strand | 193-199 | 7 | 53 |
| β-strand | 202-203 | 2 | 53 |
| β-strand | 209-211 | 3 | 53 |
| α-helix | 215-229 | 15 | |
| α-helix | 231-236 | 6 | |
| α-helix | 239-249 | 11 | |
| α-helix | 256-263 | 8 | |
| β-strand | 271 | 1 | 54 |
| β-strand | 444 | 1 | 54 |
| α-helix | 447-450 | 4 | |
| α-helix | 452-454 | 3 | |
| α-helix | 458-460 | 3 | |
| α-helix | 468-478 | 11 | |
| α-helix | 483-489 | 7 | |
| β-strand | 491-494 | 4 | 53 |
| α-helix | 496-499 | 4 | |
| α-helix | 503-514 | 12 | |
| α-helix | 520-521 | 2 | |
| β-strand | 524 | 1 | 53 |
| α-helix | 532-542 | 11 | |
| α-helix | 544-550 | 7 | |
| β-strand | 552 | 1 | 51 |
| α-helix | 554-560 | 7 | |
| α-helix | 563-566 | 4 | |
9 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| RuvB-like 1 | A, C, E | protein | 456 | Homo sapiens | Q9Y265 (AlphaFold model) |
| RuvB-like 2 | B, D, F | protein | 463 | Homo sapiens | Q9Y230 (AlphaFold model) |
| Chromatin-remodeling ATPase INO80 | G | protein | 1290 | Homo sapiens | Q9ULG1 (AlphaFold model) |
| Actin-related protein 5 | H | protein | 607 | Homo sapiens | Q9H9F9 (AlphaFold model) |
| Histone H3.1 | I, M | protein | 136 | Homo sapiens | P68431 |
| Histone H4 | J, N | protein | 103 | Homo sapiens | P62805 |
| Histone H2A type 1-B/E | K, O | protein | 130 | Homo sapiens | P04908 |
| Histone H2B type 1-J | L, P | protein | 126 | Homo sapiens | P06899 |
| INO80 complex subunit B | R | protein | 356 | Homo sapiens | Q9C086 |
| DNA (150-mer) | X | DNA | 228 | synthetic construct | |
| DNA (150-mer) | Y | DNA | 228 | synthetic construct | |
Sequence of entity 1 (A, C, E), FASTA
>6HTS_1 RuvB-like 1 (chains A, C, E)
MKIEEVKSTTKTQRIASHSHVKGLGLDESGLAKQAASGLVGQENAREACGVIVELIKSKK
MAGRAVLLAGPPGTGKTALALAIAQELGSKVPFCPMVGSEVYSTEIKKTEVLMENFRRAI
GLRIKETKEVYEGEVTELTPCETENPMGGYGKTISHVIIGLKTAKGTKQLKLDPSIFESL
QKERVEAGDVIYIEANSGAVKRQGRCDTYATEFDLEAEEYVPLPKGDVHKKKEIIQDVTL
HDLDVANARPQGGQDILSMMGQLMKPKKTEITDKLRGEINKVVNKYIDQGIAELVPGVLF
VDEVHMLDIECFTYLHRALESSIAPIVIFASNRGNCVIRGTEDITSPHGIPLDLLDRVMI
IRTMLYTPQEMKQIIKIRAQTEGINISEEALNHLGEIGTKTTLRYSVQLLTPANLLAKIN
GKDSIEKEHVEEISELFYDAKSSAKILADQQDKYMK
Sequence of entity 2 (B, D, F), FASTA
>6HTS_2 RuvB-like 2 (chains B, D, F)
MATVTATTKVPEIRDVTRIERIGAHSHIRGLGLDDALEPRQASQGMVGQLAARRAAGVVL
EMIREGKIAGRAVLIAGQPGTGKTAIAMGMAQALGPDTPFTAIAGSEIFSLEMSKTEALT
QAFRRSIGVRIKEETEIIEGEVVEIQIDRPATGTGSKVGKLTLKTTEMETIYDLGTKMIE
SLTKDKVQAGDVITIDKATGKISKLGRSFTRARDYDAMGSQTKFVQCPDGELQKRKEVVH
TVSLHEIDVINSRTQGFLALFSGDTGEIKSEVREQINAKVAEWREEGKAEIIPGVLFIDE
VHMLDIESFSFLNRALESDMAPVLIMATNRGITRIRGTSYQSPHGIPIDLLDRLLIVSTT
PYSEKDTKQILRIRCEEEDVEMSEDAYTVLTRIGLETSLRYAIQLITAASLVCRKRKGTE
VQVDDIKRVYSLFLDESRSTQYMKEYQDAFLFNELKGETMDTS
Sequence of entity 3 (G), FASTA
>6HTS_3 Chromatin-remodeling ATPase INO80 (chains G)
HLSIEQLNARRRKVWLSIVKKELPKANKQKASARNLFLTNSRKLAHQCMKEVRRAALQAQ
KNCKETLPRARRLTKEMLLYWKKYEKVEKEHRKRAEKEALEQRKLDEEMREAKRQQRKLN
FLITQTELYAHFMSRKRDMGHDGIQEEILRKLEDSSTQRQIDIGGGVVVNITQEDYDSNH
FKAQALKNAENAYHIHQARTRSFDEDAKESRAAALRAANKSGTGFGESYSLANPSIRAGE
DIPQPTIFNGKLKGYQLKGMNWLANLYEQGINGILADEMGLGKTVQSIALLAHLAERENI
WGPFLIISPASTLNNWHQEFTRFVPKFKVLPYWGNPHDRKVIRRFWSQKTLYTQDAPFHV
VITSYQLVVQDVKYFQRVKWQYMVLDEAQALKSSSSVRWKILLQFQCRNRLLLTGTPIQN
TMAELWALLHFIMPTLFDSHEEFNEWFSKDIESHAENKSAIDENQLSRLHMILKPFMLRR
IKKDVENELSDKIEILMYCQLTSRQKLLYQALKNKISIEDLLQSSMGSTQQAQNTTSSLM
NLVMQFRKVCNHPELFERQETWSPFHISLKPYHISKFIYRHGQIRVFNHSRDRWLRVLSP
FAPDYIQRSLFHRKGINEESCFSFLRFIDISPAEMANLMLQGLLARWLALFLSLKASYRL
HQLRSWGAPEGESHQRYLRNKDFLLGVNFPLSFPNLCSCPLLKSLVFSSHCKAVSGYSDQ
VVHQRRSATSSLRRCLLTELPSFLCVASPRVTAVPLDSYCNDRSAEYERRVLKEGGSLAA
KQCLLNGAPELAADWLNRRSQFFPEPAGGLWSIRPQNGWSFIRIPGKESLITDSGKLYAL
DVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLDGSSKISERRDMVADFQNR
NDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRAHRLGQTKQVTVYRLIC
KGTIEERILQRAKEKSEIQRMVISGGNFKPDTLKPKEVVSLLLDDEELEKKLRLRQEEKR
QQEETNRVKERKRKREKYAEKKKKEDELDGKRRKEGVNLVIPFVPSADNSNLSADGDDSF
ISVDSAMPSPFSEISISSELHTGSIPLDESSSDMLVIVDDPASSAPQSRATNSPASITGS
VSDTVNGISIQEMPAAGRGHSARSRGRPKGSGSTAKGAGKGRSRKSTAGSAAAMAGAKAG
AAAASAAAYAAYGYNVSKGISASSPLQTSLVRPAGLADFGPSSASSPLSSPLSKGNNVPG
NPKNLHMTSSLAPDSLVRKQGKGTNPSGGR
Sequence of entity 4 (H), FASTA
>6HTS_4 Actin-related protein 5 (chains H)
MAANVFPFRDARAAPDPVLEAGPVAHGPLPVPLVLDNGSFQVRAGWACPGQDPGPEPRLQ
FRAVCARGRGGARGASGPQVGNALGSLEPLRWMLRSPFDRNVPVNLELQELLLDYSFQHL
GVSSQGCVDHPIVLTEAVCNPLYSRQMMSELLFECYGIPKVAYGIDSLFSFYHNKPKNSM
CSGLIISSGYQCTHVLPILEGRLDAKNCKRINLGGSQAAGYLQRLLQLKYPGHLAAITLS
RMEEILHEHSYIAEDYVEELHKWRCPDYYENNVHKMQLPFSSKLLGSTLTSEEKQERRQQ
QLRRLQELNARRREEKLQLDQERLDRLLYVQELLEDGQMDQFHKALIELNMDSPEELQSY
IQKLSIAVEQAKQKILQAEVNLEVDVVDSKPETPDLEQLEPSLEDVESMNDFDPLFSEET
PGVEKPVTTVQPVFNLAAYHQLFVGTERIRAPEIIFQPSLIGEEQAGIAETLQYILDRYP
KDIQEMLVQNVFLTGGNTMYPGMKARMEKELLEMRPFRSSFQVQLASNPVLDAWYGARDW
ALNHLDDNEVWITRKEYEEKGGEYLKEHCASNIYVPIRLPKQASRSSDAQASSKGSAAGG
GGAGEQA
Sequence of entity 5 (I, M), FASTA
>6HTS_5 Histone H3.1 (chains I, M)
MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRYRPGTVALREIRRYQKSTE
LLIRKLPFQRLVREIAQDFKTDLRFQSSAVMALQEACEAYLVGLFEDTNLCAIHAKRVTI
MPKDIQLARRIRGERA
Sequence of entity 6 (J, N), FASTA
>6HTS_6 Histone H4 (chains J, N)
MSGRGKGGKGLGKGGAKRHRKVLRDNIQGITKPAIRRLARRGGVKRISGLIYEETRGVLK
VFLENVIRDAVTYTEHAKRKTVTAMDVVYALKRQGRTLYGFGG
Sequence of entity 7 (K, O), FASTA
>6HTS_7 Histone H2A type 1-B/E (chains K, O)
MSGRGKQGGKARAKAKTRSSRAGLQFPVGRVHRLLRKGNYSERVGAGAPVYLAAVLEYLT
AEILELAGNAARDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAVLLPKK
TESHHKAKGK
Sequence of entity 8 (L, P), FASTA
>6HTS_8 Histone H2B type 1-J (chains L, P)
MPEPAKSAPAPKKGSKKAVTKAQKKDGKKRKRSRKESYSIYVYKVLKQVHPDTGISSKAM
GIMNSFVNDIFERIAGEASRLAHYNKRSTITSREIQTAVRLLLPGELAKHAVSEGTKAVT
KYTSAK
Sequence of entity 9 (R), FASTA
>6HTS_9 INO80 complex subunit B (chains R)
MSKLWRRGSTSGAMEAPEPGEALELSLAGAHGHGVHKKKHKKHKKKHKKKHHQEEDAGPT
QPSPAKPQLKLKIKLGGQVLGTKSVPTFTVIPEGPRSPSPLMVVDNEEEPMEGVPLEQYR
AWLDEDSNLSPSPLRDLSGGLGGQEEEEEQRWLDALEKGELDDNGDLKKEINERLLTARQ
RALLQKARSQPSPMLPLPVAEGCPPPALTEEMLLKREERARKRRLQAARRAEEHKNQTIE
RLTKTAATSGRGGRGGARGERRGGRAAAPAPMVRYCSGAQGSTLSFPPGVPAPTAVSQRP
SPSGPPPRCSVPGCPHPRRYACSRTGQALCSLQCYRINLQMRLGGPEGPGSPLLAT
Sequence of entity 10 (X), FASTA
>6HTS_10 DNA (150-MER) (chains X)
GTCTTGAGTCCAACCCGGTAAGACACGACTTATCGCCACCCCGAGTACATGCACAGGATG
TATATATCTGACACGTGCCTGGAGACTAGGGAGTAATCCCCTTGGCGGTTAAAACGCGGG
GGACAGCGCGTACGTGCGTTTAAGCGGTGCTAGAGCTGTCTACGACCAATTGAGCGGCCT
CGGCACCGGGATTGTCCAGGGCGGCCGCGGATGCATTAATGCAGATTC
Sequence of entity 11 (Y), FASTA
>6HTS_11 DNA (150-MER) (chains Y)
GAATCTGCATTAATGCATCCGCGGCCGCCCTGGACAATCCCGGTGCCGAGGCCGCTCAAT
TGGTCGTAGACAGCTCTAGCACCGCTTAAACGCACGTACGCGCTGTCCCCCGCGTTTTAA
CCGCCAAGGGGATTACTCCCTAGTCTCCAGGCACGTGTCAGATATATACATCCTGTGCAT
GTACTCGGGGTGGCGATAAGTCGTGTCTTACCGGGTTGGACTCAAGAC
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| ZN | Zinc ion | Zn | 1 |
| ADP | Adenosine-5'-diphosphate | C10 H15 N5 O10 P2 | 6 |
Primary citation
Structure and regulation of the human INO80-nucleosome complex. Ayala, R., Willhoft, O., Aramayo, R.J. et al. Nature (2018) 556:391-395. DOI 10.1038/s41586-018-0021-6 · PubMed
Other PDB entries of the same protein (UniProt Q9Y265 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 2C9O 2.2 Å, 3D Structure of the human RuvB-like helicase RuvBL1
- 8QR1 2.4 Å, Cryo-EM structure of the human Tip60 complex
- 9EMA 2.4 Å, RUVBL1/2 in complex with ATP and CB-6644 inhibitor
- 6K0R 2.5 Å, Ruvbl1-Ruvbl2 with truncated domain II in complex with phosphorylated Cordycepin
- 9C57 2.75 Å, Reconstituted P400 Subcomplex of the human TIP60 complex
- 2XSZ 3.0 Å, The dodecameric human RuvBL1:RuvBL2 complex with truncated domains II
- 9CAE 3.07 Å, Cryo-EM structure of the reconstituted RuvBL lobe of the human TIP60 complex (composite…
- 7ZI4 3.2 Å, Cryo-EM structure of the human INO80 complex bound to a WT nucleosome
- 8X15 3.2 Å, Structure of nucleosome-bound SRCAP-C in the apo state
- 8X19 3.2 Å, Structure of nucleosome-bound SRCAP-C in the ADP-BeFx-bound state
- 8X1C 3.2 Å, Structure of nucleosome-bound SRCAP-C in the ADP-bound state
- 8XVT 3.2 Å, The core subcomplex of human NuA4/TIP60 complex
Browse structure collections
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