7LTU: PDB entry 7LTU

Aalall segment from the nucleoprotein of SARS-CoV-2, residues 217-222, crystal form 1. Determined by X-ray diffraction at 1.12 Å resolution. Released 17 Mar 2021.

Method: X-ray diffraction
Resolution: 1.12 Å
Organism: SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2
Chains: 2
Atoms: 102
Mol. weight: 1.48 kDa
Ligands: TFA
Released: 17 Mar 2021

Explore 7LTU in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

7LTU contains 0 α-helices and 2 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chains A and B: 0 helices, 1 β-strand

Element	Residues	Length	Sheet
β-strand	218-221	4	1

Molecules and chains

Molecule	Chains	Type	Length	Organism	UniProt
Aalall segment from the nucleoprotein of SARS-cov-2,RESIDUES 217-222	A, B	protein	6	SEVERE ACUTE RESPIRATORY SYNDROME CORONAVIRUS 2	P0DTC9 (AlphaFold model)

Sequence of entity 1 (A, B), FASTA

>7LTU_1 AALALL SEGMENT FROM THE NUCLEOPROTEIN OF SARS-COV-2,RESIDUES 217-222 (chains A, B)
AALALL

Ligands and cofactors

ID	Name	Formula	Copies
TFA	trifluoroacetic acid	C2 H F3 O2	3

Primary citation

Inhibition of amyloid formation of the Nucleoprotein of SARS-CoV-2. Tayeb-Fligelman, E., Cheng, X., Tai, C. et al. bioRxiv (2021). DOI 10.1101/2021.03.05.434000 · PubMed

Other PDB entries of the same protein (UniProt P0DTC9 (AlphaFold model), which also has an AlphaFold model), best resolution first:

7LUZ 1.1 Å, GQTVTK segment from the Nucleoprotein of SARS-CoV-2, residues 243-248
7VBF 1.3 Å, 1.3 Angstrom Resolution Crystal Structure of SARS-CoV-2 Nucleocapsid dimerization…
9F2H 1.3 Å, Crystal structure of SARS-CoV-2 N-protein C-terminal domain in complex with riluzole
7LV2 1.3 Å, GSQASS segment from the Nucleoprotein of SARS-CoV-2, residues 179-184
7LUX 1.3 Å, AALALL segment from the Nucleoprotein of SARS-CoV-2, residues 217-222, crystal form 2
7KGQ 1.34 Å, Crystal Structure of HLA-A*0201in complex with SARS-CoV-2 N222-230
6ZCO 1.36 Å, Crystal Structure of C-terminal Dimerization Domain of Nucleocapsid Phosphoprotein from…
7KGP 1.4 Å, Crystal Structure of HLA-A*0201 in complex with SARS-CoV-2 N316-324
9IN1 1.4 Å, Crystal Structure of C-terminal domain of nucleocapsid protein from SARS-CoV-2
6WZO 1.42 Å, Structure of SARS-CoV-2 Nucleocapsid dimerization domain, P1 form
7N0R 1.42 Å, Structure of the SARS-CoV-2 N protein RNA-binding domain bound to single-domain antibody…
6YUN 1.44 Å, 1.45 Angstrom Resolution Crystal Structure of C-terminal Dimerization Domain of…

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