7NVM: T-complex protein 1 subunit alpha
Human TRiC complex in closed state with nanobody Nb18, actin and PhLP2A bound. Determined by electron microscopy at 3.1 Å resolution. Released 2 Mar 2022.
- Method
- Electron microscopy
- Resolution
- 3.1 Å
- Organisms
- Homo sapiens, Lama glama
- Chains
- 20
- Atoms
- 71,008
- Mol. weight
- 1054.06 kDa
- Ligands
- AF3, MG, ADP
- Released
- 2 Mar 2022
Explore 7NVM in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
7NVM contains 394 α-helices and 441 β-strands across 20 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain a: 22 helices, 27 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 9-13 | 5 | 65 |
| α-helix | 15-33 | 19 | |
| β-strand | 42-46 | 5 | 66 |
| β-strand | 52-55 | 4 | 66 |
| α-helix | 58-64 | 7 | |
| β-strand | 67 | 1 | 67 |
| α-helix | 70-85 | 16 | |
| α-helix | 90-109 | 20 | |
| α-helix | 114-135 | 22 | |
| β-strand | 138-139 | 2 | 68 |
| α-helix | 146-156 | 11 | |
| α-helix | 165-178 | 14 | |
| β-strand | 181-182 | 2 | 69 |
| α-helix | 184-186 | 3 | |
| β-strand | 188-189 | 2 | 69 |
| β-strand | 196-199 | 4 | 70 |
| α-helix | 205-207 | 3 | |
| β-strand | 209-212 | 4 | 70 |
| β-strand | 213-216 | 4 | 71 |
| β-strand | 228-229 | 2 | 71 |
| β-strand | 232-237 | 6 | 71 |
| β-strand | 241 | 1 | 72 |
| β-strand | 250-252 | 3 | 73 |
| β-strand | 254 | 1 | 74 |
| α-helix | 257-281 | 25 | |
| β-strand | 285-288 | 4 | 71 |
| β-strand | 292 | 1 | 72 |
| α-helix | 294-303 | 10 | |
| β-strand | 306-308 | 3 | 71 |
| α-helix | 313-323 | 11 | |
| β-strand | 328 | 1 | 71 |
| α-helix | 342-344 | 3 | |
| β-strand | 346-355 | 10 | 71 |
| β-strand | 360-367 | 8 | 71 |
| β-strand | 373-377 | 5 | 70 |
| α-helix | 382-404 | 23 | |
| β-strand | 407-410 | 4 | 68 |
| α-helix | 414-426 | 13 | |
| α-helix | 427-429 | 3 | |
| α-helix | 433-445 | 13 | |
| α-helix | 447-455 | 9 | |
| α-helix | 460-476 | 17 | |
| α-helix | 478-485 | 8 | |
| β-strand | 486-489 | 4 | 75 |
| β-strand | 494-497 | 4 | 75 |
| α-helix | 498-501 | 4 | |
| β-strand | 504-506 | 3 | 68 |
| α-helix | 507-525 | 19 | |
| β-strand | 527-533 | 7 | 65 |
Chain A: 25 helices, 27 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 9-13 | 5 | 1 |
| α-helix | 15-32 | 18 | |
| α-helix | 33-35 | 3 | |
| β-strand | 42-46 | 5 | 2 |
| β-strand | 52-55 | 4 | 2 |
| α-helix | 58-64 | 7 | |
| β-strand | 67 | 1 | 3 |
| α-helix | 70-85 | 16 | |
| α-helix | 90-109 | 20 | |
| α-helix | 114-135 | 22 | |
| β-strand | 138-139 | 2 | 4 |
| α-helix | 140-142 | 3 | |
| α-helix | 146-156 | 11 | |
| α-helix | 165-179 | 15 | |
| β-strand | 181-182 | 2 | 5 |
| α-helix | 184-186 | 3 | |
| β-strand | 188-189 | 2 | 5 |
| β-strand | 196-199 | 4 | 6 |
| α-helix | 205-207 | 3 | |
| β-strand | 209-212 | 4 | 6 |
| β-strand | 213-216 | 4 | 7 |
| β-strand | 228-229 | 2 | 7 |
| β-strand | 232-237 | 6 | 7 |
| β-strand | 241 | 1 | 8 |
| β-strand | 250-252 | 3 | 9 |
| β-strand | 254 | 1 | 10 |
| α-helix | 257-281 | 25 | |
| β-strand | 285-288 | 4 | 7 |
| β-strand | 292 | 1 | 8 |
| α-helix | 294-303 | 10 | |
| β-strand | 306-308 | 3 | 7 |
| α-helix | 313-323 | 11 | |
| β-strand | 328 | 1 | 7 |
| α-helix | 342-344 | 3 | |
| β-strand | 346-355 | 10 | 7 |
| β-strand | 360-367 | 8 | 7 |
| β-strand | 373-377 | 5 | 6 |
| α-helix | 382-404 | 23 | |
| β-strand | 407-410 | 4 | 4 |
| α-helix | 414-426 | 13 | |
| α-helix | 427-429 | 3 | |
| α-helix | 433-445 | 13 | |
| α-helix | 447-455 | 9 | |
| α-helix | 460-476 | 17 | |
| α-helix | 478-485 | 8 | |
| β-strand | 486-489 | 4 | 11 |
| β-strand | 494-497 | 4 | 11 |
| α-helix | 498-501 | 4 | |
| β-strand | 504-506 | 3 | 4 |
| α-helix | 507-525 | 19 | |
| β-strand | 527-533 | 7 | 1 |
| α-helix | 534-535 | 2 | |
Chain b: 21 helices, 21 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 17-19 | 3 | 76 |
| α-helix | 21-39 | 19 | |
| β-strand | 49-53 | 5 | 77 |
| β-strand | 61-64 | 4 | 77 |
| α-helix | 67-72 | 6 | |
| α-helix | 79-94 | 16 | |
| α-helix | 99-118 | 20 | |
| α-helix | 123-144 | 22 | |
| β-strand | 146-147 | 2 | 78 |
| α-helix | 152-168 | 17 | |
| α-helix | 171-175 | 5 | |
| α-helix | 176-188 | 13 | |
| α-helix | 196-198 | 3 | |
| β-strand | 199-206 | 8 | 79 |
| α-helix | 209-211 | 3 | |
| β-strand | 213-214 | 2 | 79 |
| β-strand | 218-220 | 3 | 80 |
| β-strand | 224 | 1 | 80 |
| β-strand | 232-240 | 9 | 80 |
| β-strand | 254-258 | 5 | 73 |
| α-helix | 261-283 | 23 | |
| β-strand | 289-292 | 4 | 80 |
| α-helix | 298-307 | 10 | |
| β-strand | 310-312 | 3 | 80 |
| α-helix | 317-327 | 11 | |
| β-strand | 332 | 1 | 80 |
| α-helix | 338-340 | 3 | |
| α-helix | 341-343 | 3 | |
| β-strand | 344-354 | 11 | 80 |
| β-strand | 357-365 | 9 | 80 |
| β-strand | 371-377 | 7 | 79 |
| α-helix | 380-402 | 23 | |
| β-strand | 405-408 | 4 | 78 |
| α-helix | 412-427 | 16 | |
| α-helix | 431-452 | 22 | |
| α-helix | 458-471 | 14 | |
| β-strand | 476-479 | 4 | 81 |
| β-strand | 484-487 | 4 | 81 |
| α-helix | 488-491 | 4 | |
| β-strand | 494-496 | 3 | 78 |
| α-helix | 497-515 | 19 | |
| β-strand | 517-522 | 6 | 76 |
Chain B: 20 helices, 20 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 17-19 | 3 | 12 |
| α-helix | 21-39 | 19 | |
| β-strand | 49-52 | 4 | 13 |
| β-strand | 63-64 | 2 | 13 |
| α-helix | 67-72 | 6 | |
| α-helix | 79-94 | 16 | |
| α-helix | 99-118 | 20 | |
| α-helix | 125-144 | 20 | |
| β-strand | 146-147 | 2 | 14 |
| α-helix | 152-168 | 17 | |
| α-helix | 171-175 | 5 | |
| α-helix | 176-188 | 13 | |
| β-strand | 199-206 | 8 | 15 |
| α-helix | 209-211 | 3 | |
| β-strand | 213-214 | 2 | 15 |
| β-strand | 218-220 | 3 | 16 |
| β-strand | 232-240 | 9 | 16 |
| β-strand | 254-258 | 5 | 9 |
| α-helix | 261-283 | 23 | |
| β-strand | 289-292 | 4 | 16 |
| α-helix | 298-307 | 10 | |
| β-strand | 310-312 | 3 | 16 |
| α-helix | 317-327 | 11 | |
| β-strand | 332 | 1 | 16 |
| α-helix | 338-340 | 3 | |
| α-helix | 342-343 | 2 | |
| β-strand | 344-354 | 11 | 16 |
| β-strand | 357-365 | 9 | 16 |
| β-strand | 371-377 | 7 | 15 |
| α-helix | 380-402 | 23 | |
| β-strand | 405-408 | 4 | 14 |
| α-helix | 412-426 | 15 | |
| α-helix | 431-452 | 22 | |
| α-helix | 458-471 | 14 | |
| β-strand | 476-479 | 4 | 17 |
| β-strand | 484-487 | 4 | 17 |
| α-helix | 488-491 | 4 | |
| β-strand | 494-496 | 3 | 14 |
| α-helix | 497-515 | 19 | |
| β-strand | 517-522 | 6 | 12 |
Chain d: 23 helices, 23 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 29-47 | 19 | |
| β-strand | 58-62 | 5 | 65 |
| β-strand | 68-71 | 4 | 65 |
| α-helix | 74-80 | 7 | |
| α-helix | 86-101 | 16 | |
| α-helix | 106-126 | 21 | |
| α-helix | 132-151 | 20 | |
| β-strand | 153-154 | 2 | 82 |
| α-helix | 160-172 | 13 | |
| α-helix | 175-177 | 3 | |
| α-helix | 180-193 | 14 | |
| α-helix | 205-207 | 3 | |
| β-strand | 208-212 | 5 | 83 |
| β-strand | 215 | 1 | 84 |
| α-helix | 218-220 | 3 | |
| β-strand | 222 | 1 | 83 |
| β-strand | 227-229 | 3 | 85 |
| α-helix | 232-233 | 2 | |
| β-strand | 241-249 | 9 | 85 |
| β-strand | 253 | 1 | 86 |
| β-strand | 262-266 | 5 | 73 |
| α-helix | 269-291 | 23 | |
| β-strand | 297-301 | 5 | 85 |
| β-strand | 309 | 1 | 86 |
| α-helix | 311-319 | 9 | |
| β-strand | 323-328 | 6 | 85 |
| α-helix | 333-340 | 8 | |
| β-strand | 345 | 1 | 85 |
| α-helix | 348-350 | 3 | |
| α-helix | 353-355 | 3 | |
| β-strand | 357-366 | 10 | 85 |
| β-strand | 372-377 | 6 | 85 |
| β-strand | 386-390 | 5 | 83 |
| β-strand | 392 | 1 | 84 |
| α-helix | 395-416 | 22 | |
| β-strand | 420-423 | 4 | 82 |
| α-helix | 427-441 | 15 | |
| α-helix | 446-458 | 13 | |
| α-helix | 460-466 | 7 | |
| α-helix | 473-486 | 14 | |
| β-strand | 491-494 | 4 | 87 |
| β-strand | 499-502 | 4 | 87 |
| α-helix | 503-505 | 3 | |
| β-strand | 509-511 | 3 | 82 |
| α-helix | 512-530 | 19 | |
| β-strand | 532-537 | 6 | 77 |
Chain D: 23 helices, 23 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 29-48 | 20 | |
| α-helix | 49-51 | 3 | |
| β-strand | 58-62 | 5 | 1 |
| β-strand | 68-71 | 4 | 1 |
| α-helix | 74-80 | 7 | |
| α-helix | 86-101 | 16 | |
| α-helix | 106-126 | 21 | |
| α-helix | 130-151 | 22 | |
| β-strand | 153-154 | 2 | 18 |
| α-helix | 160-172 | 13 | |
| α-helix | 180-193 | 14 | |
| α-helix | 205-207 | 3 | |
| β-strand | 208-212 | 5 | 19 |
| β-strand | 215 | 1 | 20 |
| α-helix | 218-220 | 3 | |
| β-strand | 222-224 | 3 | 19 |
| β-strand | 227-229 | 3 | 21 |
| α-helix | 232-233 | 2 | |
| β-strand | 240-249 | 10 | 21 |
| β-strand | 253 | 1 | 22 |
| β-strand | 262-266 | 5 | 9 |
| α-helix | 269-291 | 23 | |
| β-strand | 297-301 | 5 | 21 |
| β-strand | 309 | 1 | 22 |
| α-helix | 311-319 | 9 | |
| β-strand | 323-328 | 6 | 21 |
| α-helix | 333-340 | 8 | |
| β-strand | 344-345 | 2 | 21 |
| α-helix | 348-350 | 3 | |
| α-helix | 353-355 | 3 | |
| β-strand | 357-366 | 10 | 21 |
| β-strand | 372-377 | 6 | 21 |
| β-strand | 386-390 | 5 | 19 |
| β-strand | 392 | 1 | 20 |
| α-helix | 395-417 | 23 | |
| β-strand | 420-423 | 4 | 18 |
| α-helix | 427-442 | 16 | |
| α-helix | 447-458 | 12 | |
| α-helix | 460-469 | 10 | |
| α-helix | 473-486 | 14 | |
| β-strand | 491-494 | 4 | 23 |
| β-strand | 499-502 | 4 | 23 |
| α-helix | 503-505 | 3 | |
| β-strand | 509-511 | 3 | 18 |
| α-helix | 512-530 | 19 | |
| β-strand | 532-536 | 5 | 13 |
Chain e: 23 helices, 21 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 19 | 1 | 88 |
| β-strand | 28-29 | 2 | 89 |
| α-helix | 31-48 | 18 | |
| α-helix | 49-51 | 3 | |
| α-helix | 56-57 | 2 | |
| β-strand | 58-62 | 5 | 76 |
| β-strand | 68-71 | 4 | 76 |
| α-helix | 74-80 | 7 | |
| α-helix | 86-101 | 16 | |
| α-helix | 108-125 | 18 | |
| α-helix | 130-151 | 22 | |
| β-strand | 153-154 | 2 | 90 |
| α-helix | 163-173 | 11 | |
| α-helix | 177-181 | 5 | |
| α-helix | 182-195 | 14 | |
| α-helix | 206-208 | 3 | |
| β-strand | 209-216 | 8 | 91 |
| α-helix | 219-221 | 3 | |
| β-strand | 223-225 | 3 | 91 |
| β-strand | 228-230 | 3 | 92 |
| β-strand | 242-251 | 10 | 92 |
| β-strand | 263-268 | 6 | 73 |
| α-helix | 271-294 | 24 | |
| β-strand | 299-302 | 4 | 92 |
| α-helix | 308-316 | 9 | |
| β-strand | 321-322 | 2 | 92 |
| α-helix | 327-337 | 11 | |
| β-strand | 342 | 1 | 92 |
| α-helix | 345-347 | 3 | |
| β-strand | 354-363 | 10 | 92 |
| β-strand | 370-375 | 6 | 92 |
| β-strand | 383-389 | 7 | 91 |
| α-helix | 392-414 | 23 | |
| β-strand | 417-420 | 4 | 90 |
| α-helix | 424-437 | 14 | |
| α-helix | 443-455 | 13 | |
| α-helix | 457-465 | 9 | |
| α-helix | 470-483 | 14 | |
| β-strand | 489 | 1 | 93 |
| β-strand | 500 | 1 | 93 |
| α-helix | 501-504 | 4 | |
| β-strand | 507-509 | 3 | 90 |
| α-helix | 510-528 | 19 | |
| β-strand | 530-534 | 5 | 89 |
Chain E: 24 helices, 24 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 19 | 1 | 24 |
| β-strand | 28-29 | 2 | 25 |
| α-helix | 31-48 | 18 | |
| α-helix | 49-51 | 3 | |
| α-helix | 56-57 | 2 | |
| β-strand | 58-62 | 5 | 12 |
| β-strand | 68-71 | 4 | 12 |
| α-helix | 74-80 | 7 | |
| α-helix | 86-101 | 16 | |
| α-helix | 108-125 | 18 | |
| α-helix | 130-151 | 22 | |
| β-strand | 153-154 | 2 | 26 |
| α-helix | 163-173 | 11 | |
| α-helix | 177-181 | 5 | |
| α-helix | 182-195 | 14 | |
| α-helix | 206-208 | 3 | |
| β-strand | 209-216 | 8 | 27 |
| α-helix | 219-221 | 3 | |
| β-strand | 223-225 | 3 | 27 |
| β-strand | 228-230 | 3 | 28 |
| β-strand | 234 | 1 | 28 |
| β-strand | 242-251 | 10 | 28 |
| β-strand | 255 | 1 | 29 |
| β-strand | 263-268 | 6 | 9 |
| α-helix | 271-294 | 24 | |
| β-strand | 299-302 | 4 | 28 |
| β-strand | 306 | 1 | 29 |
| α-helix | 308-316 | 9 | |
| β-strand | 321-322 | 2 | 28 |
| α-helix | 327-337 | 11 | |
| β-strand | 342 | 1 | 28 |
| α-helix | 345-347 | 3 | |
| β-strand | 354-363 | 10 | 28 |
| β-strand | 370-375 | 6 | 28 |
| β-strand | 383-389 | 7 | 27 |
| α-helix | 392-414 | 23 | |
| β-strand | 417-420 | 4 | 26 |
| α-helix | 424-437 | 14 | |
| α-helix | 442-444 | 3 | |
| α-helix | 445-455 | 11 | |
| α-helix | 457-465 | 9 | |
| α-helix | 470-483 | 14 | |
| β-strand | 489 | 1 | 30 |
| β-strand | 500 | 1 | 30 |
| α-helix | 501-504 | 4 | |
| β-strand | 507-509 | 3 | 26 |
| α-helix | 510-528 | 19 | |
| β-strand | 530-534 | 5 | 25 |
10 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| T-complex protein 1 subunit alpha | A, a | protein | 556 | Homo sapiens | P17987 (AlphaFold model) |
| T-complex protein 1 subunit beta | B, b | protein | 535 | Homo sapiens | P78371 (AlphaFold model) |
| T-complex protein 1 subunit delta | D, d | protein | 539 | Homo sapiens | P50991 (AlphaFold model) |
| T-complex protein 1 subunit epsilon | E, e | protein | 541 | Homo sapiens | P48643 (AlphaFold model) |
| T-complex protein 1 subunit gamma | G, g | protein | 545 | Homo sapiens | P49368 |
| T-complex protein 1 subunit eta | H, h | protein | 543 | Homo sapiens | Q99832 |
| Nanobody Nb18 | N, n | protein | 129 | Lama glama | |
| T-complex protein 1 subunit theta | Q, q | protein | 548 | Homo sapiens | P50990 |
| T-complex protein 1 subunit zeta | Z, z | protein | 531 | Homo sapiens | P40227 |
| Actin, cytoplasmic 2 | K | protein | 375 | Homo sapiens | P63261 |
| Phosducin-like protein 3 | P | protein | 239 | Homo sapiens | Q9H2J4 |
Sequence of entity 1 (A, a), FASTA
>7NVM_1 T-complex protein 1 subunit alpha (chains A, a)
MEGPLSVFGDRSTGETIRSQNVMAAASIANIVKSSLGPVGLDKMLVDDIGDVTITNDGAT
ILKLLEVEHPAAKVLCELADLQDKEVGDGTTSVVIIAAELLKNADELVKQKIHPTSVISG
YRLACKEAVRYINENLIVNTDELGRDCLINAAKTSMSSKIIGINGDFFANMVVDAVLAIK
YTDIRGQPRYPVNSVNILKAHGRSQMESMLISGYALNCVVGSQGMPKRIVNAKIACLDFS
LQKTKMKLGVQVVITDPEKLDQIRQRESDITKERIQKILATGANVILTTGGIDDMCLKYF
VEAGAMAVRRVLKRDLKRIAKASGATILSTLANLEGEETFEAAMLGQAEEVVQERICDDE
LILIKNTKARTSASIILRGANDFMCDEMERSLHDALCVVKRVLESKSVVPGGGAVEAALS
IYLENYATSMGSREQLAIAEFARSLLVIPNTLAVNAAQDSTDLVAKLRAFHNEAQVNPER
KNLKWIGLDLSNGKPRDNKQAGVFEPTIVKVKSLKFATEAAITILRIDDLIKLHPESKDD
KHGSYEDAVHSGALND
Sequence of entity 2 (B, b), FASTA
>7NVM_2 T-complex protein 1 subunit beta (chains B, b)
MASLSLAPVNIFKAGADEERAETARLTSFIGAIAIGDLVKSTLGPKGMDKILLSSGRDAS
LMVTNDGATILKNIGVDNPAAKVLVDMSRVQDDEVGDGTTSVTVLAAELLREAESLIAKK
IHPQTIIAGWREATKAAREALLSSAVDHGSDEVKFRQDLMNIAGTTLSSKLLTHHKDHFT
KLAVEAVLRLKGSGNLEAIHIIKKLGGSLADSYLDEGFLLDKKIGVNQPKRIENAKILIA
NTGMDTDKIKIFGSRVRVDSTAKVAEIEHAEKEKMKEKVERILKHGINCFINRQLIYNYP
EQLFGAAGVMAIEHADFAGVERLALVTGGEIASTFDHPELVKLGSCKLIEEVMIGEDKLI
HFSGVALGEACTIVLRGATQQILDEAERSLHDALCVLAQTVKDSRTVYGGGCSEMLMAHA
VTQLANRTPGKEAVAMESYAKALRMLPTIIADNAGYDSADLVAQLRAAHSEGNTTAGLDM
REGTIGDMAILGITESFQVKRQVLLSAAEAAEVILRVDNIIKAAPRKRVPDHHPC
Sequence of entity 3 (D, d), FASTA
>7NVM_3 T-complex protein 1 subunit delta (chains D, d)
MPENVAPRSGATAGAAGGRGKGAYQDRDKPAQIRFSNISAAKAVADAIRTSLGPKGMDKM
IQDGKGDVTITNDGATILKQMQVLHPAARMLVELSKAQDIEAGDGTTSVVIIAGSLLDSC
TKLLQKGIHPTIISESFQKALEKGIEILTDMSRPVELSDRETLLNSATTSLNSKVVSQYS
SLLSPMSVNAVMKVIDPATATSVDLRDIKIVKKLGGTIDDCELVEGLVLTQKVSNSGITR
VEKAKIGLIQFCLSAPKTDMDNQIVVSDYAQMDRVLREERAYILNLVKQIKKTGCNVLLI
QKSILRDALSDLALHFLNKMKIMVIKDIEREDIEFICKTIGTKPVAHIDQFTADMLGSAE
LAEEVNLNGSGKLLKITGCASPGKTVTIVVRGSNKLVIEEAERSIHDALCVIRCLVKKRA
LIAGGGAPEIELALRLTEYSRTLSGMESYCVRAFADAMEVIPSTLAENAGLNPISTVTEL
RNRHAQGEKTAGINVRKGGISNILEELVVQPLLVSVSALTLATETVRSILKIDDVVNTR
Sequence of entity 4 (E, e), FASTA
>7NVM_4 T-complex protein 1 subunit epsilon (chains E, e)
MASMGTLAFDEYGRPFLIIKDQDRKSRLMGLEALKSHIMAAKAVANTMRTSLGPNGLDKM
MVDKDGDVTVTNDGATILSMMDVDHQIAKLMVELSKSQDDEIGDGTTGVVVLAGALLEEA
EQLLDRGIHPIRIADGYEQAARVAIEHLDKISDSVLVDIKDTEPLIQTAKTTLGSKVVNS
CHRQMAEIAVNAVLTVADMERRDVDFELIKVEGKVGGRLEDTKLIKGVIVDKDFSHPQMP
KKVEDAKIAILTCPFEPPKPKTKHKLDVTSVEDYKALQKYEKEKFEEMIQQIKETGANLA
ICQWGFDDEANHLLLQNNLPAVRWVGGPEIELIAIATGGRIVPRFSELTAEKLGFAGLVQ
EISFGTTKDKMLVIEQCKNSRAVTIFIRGGNKMIIEEAKRSLHDALCVIRNLIRDNRVVY
GGGAAEISCALAVSQEADKCPTLEQYAMRAFADALEVIPMALSENSGMNPIQTMTEVRAR
QVKEMNPALGIDCLHKGTNDMKQQHVIETLIGKKQQISLATQMVRMILKIDDIRKPGESE
E
Sequence of entity 5 (G, g), FASTA
>7NVM_5 T-complex protein 1 subunit gamma (chains G, g)
MMGHRPVLVLSQNTKRESGRKVQSGNINAAKTIADIIRTCLGPKSMMKMLLDPMGGIVMT
NDGNAILREIQVQHPAAKSMIEISRTQDEEVGDGTTSVIILAGEMLSVAEHFLEQQMHPT
VVISAYRKALDDMISTLKKISIPVDISDSDMMLNIINSSITTKAISRWSSLACNIALDAV
KMVQFEENGRKEIDIKKYARVEKIPGGIIEDSCVLRGVMINKDVTHPRMRRYIKNPRIVL
LDSSLEYKKGESQTDIEITREEDFTRILQMEEEYIQQLCEDIIQLKPDVVITEKGISDLA
QHYLMRANITAIRRVRKTDNNRIARACGARIVSRPEELREDDVGTGAGLLEIKKIGDEYF
TFITDCKDPKACTILLRGASKEILSEVERNLQDAMQVCRNVLLDPQLVPGGGASEMAVAH
ALTEKSKAMTGVEQWPYRAVAQALEVIPRTLIQNCGASTIRLLTSLRAKHTQENCETWGV
NGETGTLVDMKELGIWEPLAVKLQTYKTAVETAVLLLRIDDIVSGHKKKGDDQSRQGGAP
DAGQE
Sequence of entity 6 (H, h), FASTA
>7NVM_6 T-complex protein 1 subunit eta (chains H, h)
MMPTPVILLKEGTDSSQGIPQLVSNISACQVIAEAVRTTLGPRGMDKLIVDGRGKATISN
DGATILKLLDVVHPAAKTLVDIAKSQDAEVGDGTTSVTLLAAEFLKQVKPYVEEGLHPQI
IIRAFRTATQLAVNKIKEIAVTVKKADKVEQRKLLEKCAMTALSSKLISQQKAFFAKMVV
DAVMMLDDLLQLKMIGIKKVQGGALEDSQLVAGVAFKKTFSYAGFEMQPKKYHNPKIALL
NVELELKAEKDNAEIRVHTVEDYQAIVDAEWNILYDKLEKIHHSGAKVVLSKLPIGDVAT
QYFADRDMFCAGRVPEEDLKRTMMACGGSIQTSVNALSADVLGRCQVFEETQIGGERYNF
FTGCPKAKTCTFILRGGAEQFMEETERSLHDAIMIVRRAIKNDSVVAGGGAIEMELSKYL
RDYSRTIPGKQQLLIGAYAKALEIIPRQLCDNAGFDATNILNKLRARHAQGGTWYGVDIN
NEDIADNFEAFVWEPAMVRINALTAASEAACLIVSVDETIKNPRSTVDAPTAAGRGRGRG
RPH
Sequence of entity 7 (N, n), FASTA
>7NVM_7 Nanobody Nb18 (chains N, n)
QVQLVESGGGLVQAGGSLRLSCGASGTFFRINDMGWYRQASGKQRELVASITRGGTTDYA
DSVKGRFTISRDNAKNTVYLQMNSLKPEDTAVYYCKANRNWGREWDDYWGQGTQVTVSSH
HHHHHEPEA
Sequence of entity 8 (Q, q), FASTA
>7NVM_8 T-complex protein 1 subunit theta (chains Q, q)
MALHVPKAPGFAQMLKEGAKHFSGLEEAVYRNIQACKELAQTTRTAYGPNGMNKMVINHL
EKLFVTNDAATILRELEVQHPAAKMIVMASHMQEQEVGDGTNFVLVFAGALLELAEELLR
IGLSVSEVIEGYEIACRKAHEILPNLVCCSAKNLRDIDEVSSLLRTSIMSKQYGNEVFLA
KLIAQACVSIFPDSGHFNVDNIRVCKILGSGISSSSVLHGMVFKKETEGDVTSVKDAKIA
VYSCPFDGMITETKGTVLIKTAEELMNFSKGEENLMDAQVKAIADTGANVVVTGGKVADM
ALHYANKYNIMLVRLNSKWDLRRLCKTVGATALPRLTPPVLEEMGHCDSVYLSEVGDTQV
VVFKHEKEDGAISTIVLRGSTDNLMDDIERAVDDGVNTFKVLTRDKRLVPGGGATEIELA
KQITSYGETCPGLEQYAIKKFAEAFEAIPRALAENSGVKANEVISKLYAVHQEGNKNVGL
DIEAEVPAVKDMLEAGILDTYLGKYWAIKLATNAAVTVLRVDQIIMAKPAGGPKPPSGKK
DWDDDQND
Sequence of entity 9 (Z, z), FASTA
>7NVM_9 T-complex protein 1 subunit zeta (chains Z, z)
MAAVKTLNPKAEVARAQAALAVNISAARGLQDVLRTNLGPKGTMKMLVSGAGDIKLTKDG
NVLLHEMQIQHPTASLIAKVATAQDDITGDGTTSNVLIIGELLKQADLYISEGLHPRIIT
EGFEAAKEKALQFLEEVKVSREMDRETLIDVARTSLRTKVHAELADVLTEAVVDSILAIK
KQDEPIDLFMIEIMEMKHKSETDTSLIRGLVLDHGARHPDMKKRVEDAYILTCNVSLEYE
KTEVNSGFFYKSAEEREKLVKAERKFIEDRVKKIIELKRKVCGDSDKGFVVINQKGIDPF
SLDALSKEGIVALRRAKRRNMERLTLACGGVALNSFDDLSPDCLGHAGLVYEYTLGEEKF
TFIEKCNNPRSVTLLIKGPNKHTLTQIKDAVRDGLRAVKNAIDDGCVVPGAGAVEVAMAE
ALIKHKPSVKGRAQLGVQAFADALLIIPKVLAQNSGFDLQETLVKIQAEHSESGQLVGVD
LNTGEPMVAAEVGVWDNYCVKKQLLHSCTVIATNILLVDEIMRAGMSSLKG
Sequence of entity 10 (K), FASTA
>7NVM_10 Actin, cytoplasmic 2 (chains K)
MEEEIAALVIDNGSGMCKAGFAGDDAPRAVFPSIVGRPRHQGVMVGMGQKDSYVGDEAQS
KRGILTLKYPIEHGIVTNWDDMEKIWHHTFYNELRVAPEEHPVLLTEAPLNPKANREKMT
QIMFETFNTPAMYVAIQAVLSLYASGRTTGIVMDSGDGVTHTVPIYEGYALPHAILRLDL
AGRDLTDYLMKILTERGYSFTTTAEREIVRDIKEKLCYVALDFEQEMATAASSSSLEKSY
ELPDGQVITIGNERFRCPEALFQPSFLGMESCGIHETTFNSIMKCDVDIRKDLYANTVLS
GGTTMYPGIADRMQKEITALAPSTMKIKIIAPPERKYSVWIGGSILASLSTFQQMWISKQ
EYDESGPSIVHRKCF
Sequence of entity 11 (P), FASTA
>7NVM_11 Phosducin-like protein 3 (chains P)
MQDPNADTEWNDILRKKGILPPKESLKELEEEAEEEQRILQQSVVKTYEDMTLEELEDHE
DEFNEEDERAIEMYRRRRLAEWKATKLKNKFGEVLEISGKDYVQEVTKAGEGLWVILHLY
KQGIPLCALINQHLSGLARKFPDVKFIKAISTTCIPNYPDRNLPTIFVYLEGDIKAQFIG
PLVFGGMNLTRDELEWKLSESGAIMTDLEENPKKPIEDVLLSSVRRSVLMKRDSDSEGD
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| AF3 | Aluminum fluoride | Al F3 | 16 |
| MG | Magnesium ion | Mg | 16 |
| ADP | Adenosine-5'-diphosphate | C10 H15 N5 O10 P2 | 16 |
Primary citation
Snapshots of actin and tubulin folding inside the TRiC chaperonin. Kelly, J.J., Tranter, D., Pardon, E. et al. Nat Struct Mol Biol (2022) 29:420-429. DOI 10.1038/s41594-022-00755-1 · PubMed
Other PDB entries of the same protein (UniProt P17987 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 7NVL 2.5 Å, Human TRiC complex in closed state with nanobody bound (Consensus Map)
- 8SH9 2.7 Å, CCT G beta 5 complex best PhLP1 class
- 9S72 2.71 Å, Human CCT in Closed Conformation
- 8SHE 2.8 Å, CCT-G beta 5 complex closed state 8
- 8SHG 2.8 Å, CCT G beta 5 complex closed state 9
- 8SHN 2.8 Å, CCT-G beta 5 complex closed state 6
- 7TTT 2.9 Å, The beta-tubulin folding intermediate III
- 8SG9 2.9 Å, CCT G beta 5 complex closed state 3
- 8SGC 2.9 Å, CCT G beta 5 complex closed state 2
- 8SGL 2.9 Å, CCT G beta 5 complex closed state 15
- 8SHD 2.9 Å, CCT G beta 5 complex closed state 10
- 8SHQ 2.9 Å, CCT G beta 5 complex closed state 12
Browse structure collections
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