7OBA: Human RNA Polymerase I
Cryo-EM structure of human RNA Polymerase I in complex with RRN3. Determined by electron microscopy at 3.1 Å resolution. Released 8 Dec 2021.
- Method
- Electron microscopy
- Resolution
- 3.1 Å
- Organism
- Homo sapiens
- Chains
- 14
- Atoms
- 35,679
- Mol. weight
- 677.43 kDa
- Ligands
- ZN
- Released
- 8 Dec 2021
Explore 7OBA in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
7OBA contains 186 α-helices and 243 β-strands across 14 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain A: 72 helices, 64 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 14-19 | 6 | 1 |
| α-helix | 20-21 | 2 | |
| β-strand | 31-32 | 2 | 2 |
| β-strand | 39 | 1 | 3 |
| β-strand | 45 | 1 | 3 |
| α-helix | 46 | 1 | |
| β-strand | 79-80 | 2 | 2 |
| β-strand | 81-88 | 8 | 4 |
| α-helix | 93-98 | 6 | |
| β-strand | 103 | 1 | 5 |
| β-strand | 110 | 1 | 5 |
| α-helix | 114-123 | 10 | |
| α-helix | 137-148 | 12 | |
| α-helix | 159-170 | 12 | |
| α-helix | 182-198 | 17 | |
| β-strand | 215-218 | 4 | 6 |
| β-strand | 222-225 | 4 | 6 |
| β-strand | 255 | 1 | 6 |
| α-helix | 258-272 | 15 | |
| α-helix | 285-287 | 3 | |
| β-strand | 298-302 | 5 | 4 |
| α-helix | 303-306 | 4 | |
| α-helix | 307-309 | 3 | |
| α-helix | 325-345 | 21 | |
| α-helix | 388-402 | 15 | |
| α-helix | 417-421 | 5 | |
| β-strand | 436-437 | 2 | 7 |
| β-strand | 440-447 | 8 | 8 |
| β-strand | 455-458 | 4 | 8 |
| β-strand | 467-471 | 5 | 9 |
| α-helix | 482-485 | 4 | |
| β-strand | 498 | 1 | 9 |
| β-strand | 504 | 1 | 9 |
| α-helix | 513-520 | 8 | |
| β-strand | 537-541 | 5 | 9 |
| α-helix | 542 | 1 | |
| α-helix | 546 | 1 | |
| β-strand | 547-551 | 5 | 8 |
| α-helix | 558-560 | 3 | |
| β-strand | 561-568 | 8 | 8 |
| β-strand | 575-577 | 3 | 8 |
| α-helix | 581-583 | 3 | |
| β-strand | 593-597 | 5 | 8 |
| α-helix | 606-610 | 5 | |
| β-strand | 613 | 1 | 8 |
| β-strand | 619 | 1 | 10 |
| β-strand | 626 | 1 | 10 |
| α-helix | 634-641 | 8 | |
| β-strand | 647-648 | 2 | 11 |
| α-helix | 650-660 | 11 | |
| β-strand | 675-677 | 3 | 12 |
| β-strand | 681 | 1 | 12 |
| β-strand | 682-683 | 2 | 11 |
| α-helix | 684-693 | 10 | |
| α-helix | 701-704 | 4 | |
| β-strand | 705-706 | 2 | 13 |
| β-strand | 738-740 | 3 | 13 |
| β-strand | 743-746 | 4 | 13 |
| α-helix | 751-754 | 4 | |
| α-helix | 761-764 | 4 | |
| α-helix | 774-786 | 13 | |
| β-strand | 804 | 1 | 14 |
| α-helix | 818-820 | 3 | |
| α-helix | 825-828 | 4 | |
| α-helix | 839-849 | 11 | |
| α-helix | 862-868 | 7 | |
| α-helix | 873-880 | 8 | |
| β-strand | 885 | 1 | 14 |
| α-helix | 893-899 | 7 | |
| α-helix | 908-913 | 6 | |
| β-strand | 918 | 1 | 15 |
| β-strand | 921 | 1 | 16 |
| β-strand | 924 | 1 | 16 |
| α-helix | 926-928 | 3 | |
| α-helix | 939 | 1 | |
| α-helix | 945-948 | 4 | |
| β-strand | 950 | 1 | 15 |
| α-helix | 961-979 | 19 | |
| α-helix | 986-995 | 10 | |
| β-strand | 1001 | 1 | 17 |
| β-strand | 1007-1008 | 2 | 17 |
| β-strand | 1014-1016 | 3 | 17 |
| α-helix | 1019-1021 | 3 | |
| β-strand | 1024 | 1 | 18 |
| α-helix | 1027-1029 | 3 | |
| α-helix | 1034-1036 | 3 | |
| α-helix | 1038-1041 | 4 | |
| α-helix | 1044-1047 | 4 | |
| α-helix | 1062-1064 | 3 | |
| α-helix | 1068-1075 | 8 | |
| α-helix | 1088-1096 | 9 | |
| α-helix | 1117-1125 | 9 | |
| α-helix | 1134-1137 | 4 | |
| α-helix | 1142-1145 | 4 | |
| α-helix | 1161-1177 | 17 | |
| α-helix | 1189-1202 | 14 | |
| β-strand | 1204 | 1 | 18 |
| α-helix | 1205-1206 | 2 | |
| α-helix | 1211-1214 | 4 | |
| α-helix | 1245-1252 | 8 | |
| β-strand | 1264-1267 | 4 | 19 |
| β-strand | 1268 | 1 | 20 |
| α-helix | 1273-1283 | 11 | |
| β-strand | 1289 | 1 | 21 |
| α-helix | 1290-1293 | 4 | |
| β-strand | 1294-1301 | 8 | 22 |
| β-strand | 1304-1305 | 2 | 23 |
| β-strand | 1311-1312 | 2 | 23 |
| β-strand | 1313-1314 | 2 | 24 |
| β-strand | 1317-1321 | 5 | 22 |
| α-helix | 1322-1323 | 2 | |
| α-helix | 1324-1326 | 3 | |
| α-helix | 1337-1341 | 5 | |
| α-helix | 1342-1346 | 5 | |
| α-helix | 1347-1357 | 11 | |
| β-strand | 1371 | 1 | 25 |
| α-helix | 1502-1506 | 5 | |
| β-strand | 1512 | 1 | 26 |
| β-strand | 1526-1527 | 2 | 22 |
| β-strand | 1529 | 1 | 26 |
| β-strand | 1530-1531 | 2 | 24 |
| α-helix | 1543-1547 | 5 | |
| β-strand | 1551 | 1 | 21 |
| β-strand | 1566 | 1 | 19 |
| β-strand | 1577-1580 | 4 | 19 |
| α-helix | 1585-1588 | 4 | |
| β-strand | 1595 | 1 | 20 |
| α-helix | 1597-1599 | 3 | |
| β-strand | 1601-1602 | 2 | 19 |
| α-helix | 1621-1629 | 9 | |
| α-helix | 1638-1648 | 11 | |
| α-helix | 1668-1674 | 7 | |
| α-helix | 1679-1686 | 8 | |
| β-strand | 1690 | 1 | 1 |
| α-helix | 1698-1700 | 3 | |
| β-strand | 1713-1718 | 6 | 27 |
Chain B: 44 helices, 71 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 27-28 | 2 | |
| α-helix | 40-47 | 8 | |
| α-helix | 48-52 | 5 | |
| α-helix | 53-55 | 3 | |
| α-helix | 62-63 | 2 | |
| β-strand | 64-67 | 4 | 28 |
| β-strand | 72-75 | 4 | 28 |
| β-strand | 77-82 | 6 | 29 |
| α-helix | 83-85 | 3 | |
| β-strand | 86 | 1 | 30 |
| α-helix | 87-88 | 2 | |
| β-strand | 97 | 1 | 30 |
| α-helix | 100-105 | 6 | |
| β-strand | 111-118 | 8 | 29 |
| β-strand | 121-122 | 2 | 28 |
| β-strand | 125-126 | 2 | 28 |
| β-strand | 130-138 | 9 | 29 |
| α-helix | 153-157 | 5 | |
| α-helix | 161-162 | 2 | |
| β-strand | 170-172 | 3 | 31 |
| β-strand | 175-179 | 5 | 31 |
| β-strand | 181-185 | 5 | 32 |
| α-helix | 186 | 1 | |
| β-strand | 187 | 1 | 25 |
| β-strand | 191-194 | 4 | 25 |
| α-helix | 196-200 | 5 | |
| β-strand | 205-216 | 12 | 25 |
| β-strand | 220-229 | 10 | 25 |
| β-strand | 234-239 | 6 | 25 |
| β-strand | 244-245 | 2 | 25 |
| β-strand | 248 | 1 | 25 |
| α-helix | 249-256 | 8 | |
| α-helix | 261-267 | 7 | |
| α-helix | 277-291 | 15 | |
| α-helix | 297-307 | 11 | |
| α-helix | 327-330 | 4 | |
| α-helix | 339-357 | 19 | |
| α-helix | 369-371 | 3 | |
| β-strand | 372-375 | 4 | 32 |
| α-helix | 379-404 | 26 | |
| α-helix | 428-436 | 9 | |
| β-strand | 454-456 | 3 | 31 |
| α-helix | 462-466 | 5 | |
| β-strand | 471-473 | 3 | 32 |
| α-helix | 485-487 | 3 | |
| α-helix | 491-493 | 3 | |
| β-strand | 497 | 1 | 33 |
| β-strand | 511-513 | 3 | 32 |
| β-strand | 514 | 1 | 33 |
| β-strand | 519-520 | 2 | 34 |
| α-helix | 529-536 | 8 | |
| β-strand | 539-541 | 3 | 35 |
| α-helix | 549 | 1 | |
| β-strand | 553-558 | 6 | 35 |
| β-strand | 561-567 | 7 | 35 |
| α-helix | 572-575 | 4 | |
| β-strand | 594-598 | 5 | 35 |
| α-helix | 607-608 | 2 | |
| β-strand | 609-613 | 5 | 35 |
| β-strand | 619-625 | 7 | 34 |
| β-strand | 630-635 | 6 | 34 |
| α-helix | 638-640 | 3 | |
| β-strand | 658-660 | 3 | 34 |
| α-helix | 669-672 | 4 | |
| α-helix | 682-688 | 7 | |
| β-strand | 695 | 1 | 36 |
| β-strand | 710-714 | 5 | 37 |
| β-strand | 718 | 1 | 38 |
| β-strand | 722-723 | 2 | 39 |
| α-helix | 726-729 | 4 | |
| β-strand | 739-745 | 7 | 40 |
| β-strand | 756-760 | 5 | 40 |
| α-helix | 761-766 | 6 | |
| β-strand | 771-780 | 10 | 37 |
| β-strand | 792-794 | 3 | 41 |
| α-helix | 801-803 | 3 | |
| β-strand | 807 | 1 | 42 |
| β-strand | 813 | 1 | 42 |
| α-helix | 814 | 1 | |
| β-strand | 818-819 | 2 | 37 |
| β-strand | 824-826 | 3 | 43 |
| β-strand | 828-830 | 3 | 41 |
| β-strand | 836 | 1 | 41 |
| β-strand | 839-840 | 2 | 43 |
| β-strand | 847-854 | 8 | 37 |
| β-strand | 863 | 1 | 44 |
| β-strand | 866-873 | 8 | 37 |
| β-strand | 882-884 | 3 | 40 |
| β-strand | 891-897 | 7 | 40 |
| α-helix | 899-901 | 3 | |
| β-strand | 905 | 1 | 45 |
| β-strand | 913-915 | 3 | 40 |
| α-helix | 927-939 | 13 | |
| β-strand | 945-946 | 2 | 39 |
| α-helix | 962-968 | 7 | |
| β-strand | 976-977 | 2 | 40 |
| β-strand | 979 | 1 | 45 |
| β-strand | 992-1001 | 10 | 40 |
| β-strand | 1002 | 1 | 36 |
| β-strand | 1013 | 1 | 8 |
| α-helix | 1016-1017 | 2 | |
| β-strand | 1018 | 1 | 46 |
| β-strand | 1025 | 1 | 46 |
| β-strand | 1035-1036 | 2 | 7 |
| α-helix | 1039-1048 | 10 | |
| α-helix | 1051-1055 | 5 | |
| α-helix | 1056-1061 | 6 | |
| β-strand | 1064-1070 | 7 | 47 |
| β-strand | 1079 | 1 | 48 |
| α-helix | 1081-1085 | 5 | |
| β-strand | 1098 | 1 | 48 |
| β-strand | 1103 | 1 | 48 |
| β-strand | 1107-1113 | 7 | 47 |
| α-helix | 1116-1123 | 8 | |
| β-strand | 1128-1133 | 6 | 1 |
Chain C: 15 helices, 18 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 42-45 | 4 | |
| β-strand | 50 | 1 | 49 |
| β-strand | 53-57 | 5 | 49 |
| β-strand | 60-66 | 7 | 49 |
| α-helix | 70-82 | 13 | |
| β-strand | 86-95 | 10 | 50 |
| α-helix | 105-111 | 7 | |
| α-helix | 114 | 1 | |
| β-strand | 115 | 1 | 51 |
| α-helix | 119-121 | 3 | |
| α-helix | 123-126 | 4 | |
| β-strand | 138 | 1 | 50 |
| β-strand | 140-144 | 5 | 50 |
| β-strand | 147-148 | 2 | 52 |
| α-helix | 159-162 | 4 | |
| β-strand | 163-164 | 2 | 52 |
| β-strand | 169 | 1 | 53 |
| α-helix | 170-172 | 3 | |
| β-strand | 173-175 | 3 | 50 |
| α-helix | 181-184 | 4 | |
| β-strand | 192 | 1 | 51 |
| β-strand | 198 | 1 | 53 |
| β-strand | 208-217 | 10 | 50 |
| α-helix | 223-225 | 3 | |
| β-strand | 228-240 | 13 | 49 |
| α-helix | 247-249 | 3 | |
| α-helix | 250-256 | 7 | |
| β-strand | 262-267 | 6 | 54 |
| β-strand | 270-275 | 6 | 54 |
| α-helix | 278-280 | 3 | |
| α-helix | 286-289 | 4 | |
| β-strand | 298-312 | 15 | 49 |
| α-helix | 318-343 | 26 | |
Chain E: 9 helices, 10 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 5-21 | 17 | |
| α-helix | 22-24 | 3 | |
| α-helix | 30-32 | 3 | |
| α-helix | 39-42 | 4 | |
| β-strand | 60-63 | 4 | 55 |
| β-strand | 71-75 | 5 | 55 |
| β-strand | 82 | 1 | 56 |
| α-helix | 90-95 | 6 | |
| β-strand | 101-106 | 6 | 55 |
| β-strand | 110 | 1 | 56 |
| α-helix | 114-119 | 6 | |
| β-strand | 126-131 | 6 | 55 |
| α-helix | 133-135 | 3 | |
| α-helix | 139-141 | 3 | |
| β-strand | 147-149 | 3 | 57 |
| α-helix | 153-162 | 10 | |
| β-strand | 172-173 | 2 | 57 |
| β-strand | 190-195 | 6 | 57 |
| β-strand | 203-209 | 7 | 57 |
Chain F: 3 helices, 4 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 56 | 1 | 58 |
| α-helix | 59-71 | 13 | |
| α-helix | 77-79 | 3 | |
| α-helix | 89-98 | 10 | |
| β-strand | 105-109 | 5 | 27 |
| β-strand | 115-119 | 5 | 27 |
| β-strand | 124 | 1 | 58 |
Chain G: 2 helices, 16 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 35-40 | 6 | |
| β-strand | 43 | 1 | 59 |
| β-strand | 46 | 1 | 59 |
| β-strand | 49 | 1 | 60 |
| β-strand | 52-54 | 3 | 61 |
| β-strand | 57-59 | 3 | 62 |
| α-helix | 68-76 | 9 | |
| β-strand | 90 | 1 | 60 |
| β-strand | 97-98 | 2 | 61 |
| β-strand | 102-105 | 4 | 27 |
| β-strand | 112-114 | 3 | 62 |
| β-strand | 116-119 | 4 | 61 |
| β-strand | 122 | 1 | 60 |
| β-strand | 135-138 | 4 | 63 |
| β-strand | 143-147 | 5 | 63 |
| β-strand | 151-155 | 5 | 63 |
| β-strand | 183-185 | 3 | 63 |
| β-strand | 193-195 | 3 | 63 |
Chain H: 0 helices, 15 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 4-15 | 12 | 12 |
| β-strand | 25-32 | 8 | 12 |
| β-strand | 38-44 | 7 | 12 |
| β-strand | 55-61 | 7 | 12 |
| β-strand | 65 | 1 | 64 |
| β-strand | 84 | 1 | 64 |
| β-strand | 90-98 | 9 | 12 |
| β-strand | 101 | 1 | 65 |
| β-strand | 112 | 1 | 65 |
| β-strand | 115-117 | 3 | 12 |
| β-strand | 118-119 | 2 | 66 |
| β-strand | 121 | 1 | 66 |
| β-strand | 123-124 | 2 | 12 |
| β-strand | 127 | 1 | 65 |
| β-strand | 140-147 | 8 | 12 |
Chain I: 3 helices, 10 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 14 | 1 | 67 |
| β-strand | 19 | 1 | 68 |
| α-helix | 25 | 1 | |
| β-strand | 26 | 1 | 68 |
| α-helix | 27 | 1 | |
| β-strand | 35-37 | 3 | 69 |
| β-strand | 44-46 | 3 | 69 |
| α-helix | 48-52 | 5 | |
| β-strand | 55-60 | 6 | 22 |
| β-strand | 82-83 | 2 | 70 |
| β-strand | 95-99 | 5 | 70 |
| β-strand | 111-115 | 5 | 70 |
| β-strand | 121-124 | 4 | 70 |
6 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| DNA-directed RNA polymerase I subunit RPA1 | A | protein | 1720 | Homo sapiens | O95602 (AlphaFold model) |
| DNA-directed RNA polymerase I subunit RPA2 | B | protein | 1135 | Homo sapiens | Q9H9Y6 (AlphaFold model) |
| DNA-directed RNA polymerases I and III subunit RPAC1 | C | protein | 346 | Homo sapiens | O15160 (AlphaFold model) |
| DNA-directed RNA polymerases I, II, and III subunit RPABC1 | E | protein | 210 | Homo sapiens | P19388 (AlphaFold model) |
| DNA-directed RNA polymerases I, II, and III subunit RPABC2 | F | protein | 127 | Homo sapiens | P61218 |
| DNA-directed RNA polymerase I subunit RPA43 | G | protein | 338 | Homo sapiens | Q3B726 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC3 | H | protein | 150 | Homo sapiens | P52434 |
| DNA-directed RNA polymerase I subunit RPA12 | I | protein | 126 | Homo sapiens | Q9P1U0 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC5 | J | protein | 67 | Homo sapiens | P62875 |
| DNA-directed RNA polymerases I and III subunit RPAC2 | K | protein | 133 | Homo sapiens | P0DPB6 |
| DNA-directed RNA polymerases I, II, and III subunit RPABC4 | L | protein | 58 | Homo sapiens | P53803 |
| DNA-directed RNA polymerase I subunit RPA49 | M | protein | 419 | Homo sapiens | Q9GZS1 |
2 more molecules are not listed.
Sequence of entity 1 (A), FASTA
>7OBA_1 DNA-directed RNA polymerase I subunit RPA1 (chains A)
MLISKNMPWRRLQGISFGMYSAEELKKLSVKSITNPRYLDSLGNPSANGLYDLALGPADS
KEVCSTCVQDFSNCSGHLGHIELPLTVYNPLLFDKLYLLLRGSCLNCHMLTCPRAVIHLL
LCQLRVLEVGALQAVYELERILNRFLEENPDPSASEIREELEQYTTEIVQNNLLGSQGAH
VKNVCESKSKLIALFWKAHMNAKRCPHCKTGRSVVRKEHNSKLTITFPAMVHRTAGQKDS
EPLGIEEAQIGKRGYLTPTSAREHLSALWKNEGFFLNYLFSGMDDDGMESRFNPSVFFLD
FLVVPPSRYRPVSRLGDQMFTNGQTVNLQAVMKDVVLIRKLLALMAQEQKLPEEVATPTT
DEEKDSLIAIDRSFLSTLPGQSLIDKLYNIWIRLQSHVNIVFDSEMDKLMMDKYPGIRQI
LEKKEGLFRKHMMGKRVDYAARSVICPDMYINTNEIGIPMVFATKLTYPQPVTPWNVQEL
RQAVINGPNVHPGASMVINEDGSRTALSAVDMTQREAVAKQLLTPATGAPKPQGTKIVCR
HVKNGDILLLNRQPTLHRPSIQAHRARILPEEKVLRLHYANCKAYNADFDGDEMNAHFPQ
SELGRAEAYVLACTDQQYLVPKDGQPLAGLIQDHMVSGASMTTRGCFFTREHYMELVYRG
LTDKVGRVKLLSPSILKPFPLWTGKQVVSTLLINIIPEDHIPLNLSGKAKITGKAWVKET
PRSVPGFNPDSMCESQVIIREGELLCGVLDKAHYGSSAYGLVHCCYEIYGGETSGKVLTC
LARLFTAYLQLYRGFTLGVEDILVKPKADVKRQRIIEESTHCGPQAVRAALNLPEAASYD
EVRGKWQDAHLGKDQRDFNMIDLKFKEEVNHYSNEINKACMPFGLHRQFPENSLQMMVQS
GAKGSTVNTMQISCLLGQIELEGRRPPLMASGKSLPCFEPYEFTPRAGGFVTGRFLTGIK
PPEFFFHCMAGREGLVDTAVKTSRSGYLQRCIIKHLEGLVVQYDLTVRDSDGSVVQFLYG
EDGLDIPKTQFLQPKQFPFLASNYEVIMKSQHLHEVLSRADPKKALHHFRAIKKWQSKHP
NTLLRRGAFLSYSQKIQEAVKALKLESENRNGRSPGTQEMLRMWYELDEESRRKYQKKAA
ACPDPSLSVWRPDIYFASVSETFETKVDDYSQEWAAQTEKSYEKSELSLDRLRTLLQLKW
QRSLCEPGEAVGLLAAQSIGEPSTQMTLNTFHFAGRGEMNVTLGIPRLREILMVASANIK
TPMMSVPVLNTKKALKRVKSLKKQLTRVCLGEVLQKIDVQESFCMEEKQNKFQVYQLRFQ
FLPHAYYQQEKCLRPEDILRFMETRFFKLLMESIKKKNNKASAFRNVNTRRATQRDLDNA
GELGRSRGEQEGDEEEEGHIVDAEAEEGDADASDAKRKEKQEEEVDYESEEEEEREGEEN
DDEDMQEERNPHREGARKTQEQDEEVGLGTEEDPSLPALLTQPRKPTHSQEPQGPEAMER
RVQAVREIHPFIDDYQYDTEESLWCQVTVKLPLMKINFDMSSLVVSLAHGAVIYATKGIT
RCLLNETTNNKNEKELVLNTEGINLPELFKYAEVLDLRRLYSNDIHAIANTYGIEAALRV
IEKEIKDVFAVYGIAVDPRHLSLVADYMCFEGVYKPLNRFGIRSNSSPLQQMTFETSFQF
LKQATMLGSHDELRSPSACLVVGKVVRGGTGLFELKQPLR
Sequence of entity 2 (B), FASTA
>7OBA_2 DNA-directed RNA polymerase I subunit RPA2 (chains B)
MDPGSRWRNLPSGPSLKHLTDPSYGIPREQQKAALQELTRAHVESFNYAVHEGLGLAVQA
IPPFEFAFKDERISFTILDAVISPPTVPKGTICKEANVYPAECRGRRSTYRGKLTADINW
AVNGISKGIIKQFLGYVPIMVKSKLCNLRNLPPQALIEHHEEAEEMGGYFIINGIEKVIR
MLIMPRRNFPIAMIRPKWKTRGPGYTQYGVSMHCVREEHSAVNMNLHYLENGTVMLNFIY
RKELFFLPLGFALKALVSFSDYQIFQELIKGKEDDSFLRNSVSQMLRIVMEEGCSTQKQV
LNYLGECFRVKLNVPDWYPNEQAAEFLFNQCICIHLKSNTEKFYMLCLMTRKLFALAKGE
CMEDNPDSLVNQEVLTPGQLFLMFLKEKLEGWLVSIKIAFDKKAQKTSVSMNTDNLMRIF
TMGIDLTKPFEYLFATGNLRSKTGLGLLQDSGLCVVADKLNFIRYLSHFRCVHRGADFAK
MRTTTVRRLLPESWGFLCPVHTPDGEPCGLMNHLTAVCEVVTQFVYTASIPALLCNLGVT
PIDGAPHRSYSECYPVLLDGVMVGWVDKDLAPGIADSLRHFKVLREKRIPPWMEVVLIPM
TGKPSLYPGLFLFTTPCRLVRPVQNLALGKEELIGTMEQIFMNVAIFEDEVFAGVTTHQE
LFPHSLLSVIANFIPFSDHNQSPRNMYQCQMGKQTMGFPLLTYQDRSDNKLYRLQTPQSP
LVRPSMYDYYDMDNYPIGTNAIVAVISYTGYDMEDAMIVNKASWERGFAHGSVYKSEFID
LSEKIKQGDSSLVFGIKPGDPRVLQKLDDDGLPFIGAKLQYGDPYYSYLNLNTGESFVMY
YKSKENCVVDNIKVCSNDTGSGKFKCVCITMRVPRNPTIGDKFASRHGQKGILSRLWPAE
DMPFTESGMVPDILFNPHGFPSRMTIGMLIESMAGKSAALHGLCHDATPFIFSEENSALE
YFGEMLKAAGYNFYGTERLYSGISGLELEADIFIGVVYYQRLRHMVSDKFQVRTTGARDR
VTNQPIGGRNVQGGIRFGEMERDALLAHGTSFLLHDRLFNCSDRSVAHVCVKCGSLLSPL
LEKPPPSWSAMRNRKYNCTLCSRSDTIDTVSVPYVFRYFVAELAAMNIKVKLDVV
Sequence of entity 3 (C), FASTA
>7OBA_3 DNA-directed RNA polymerases I and III subunit RPAC1 (chains C)
MAASQAVEEMRSRVVLGEFGVRNVHTTDFPGNYSGYDDAWDQDRFEKNFRVDVVHMDENS
LEFDMVGIDAAIANAFRRILLAEVPTMAVEKVLVYNNTSIVQDEILAHRLGLIPIHADPR
LFEYRNQGDEEGTEIDTLQFRLQVRCTRNPHAAKDSSDPNELYVNHKVYTRHMTWIPLGN
QADLFPEGTIRPVHDDILIAQLRPGQEIDLLMHCVKGIGKDHAKFSPVATASYRLLPDIT
LLEPVEGEAAEELSRCFSPGVIEVQEVQGKKVARVANPRLDTFSREIFRNEKLKKVVRLA
RVRDHYIFSVESTGVLPPDVLVSEAIKVLMGKCRRFLDELDAVQMD
Sequence of entity 4 (E), FASTA
>7OBA_4 DNA-directed RNA polymerases I, II, and III subunit RPABC1 (chains E)
MDDEEETYRLWKIRKTIMQLCHDRGYLVTQDELDQTLEEFKAQFGDKPSEGRPRRTDLTV
LVAHNDDPTDQMFVFFPEEPKVGIKTIKVYCQRMQEENITRALIVVQQGMTPSAKQSLVD
MAPKYILEQFLQQELLINITEHELVPEHVVMTKEEVTELLARYKLRENQLPRIQAGDPVA
RYFGIKRGQVVKIIRPSETAGRYITYRLVQ
Sequence of entity 5 (F), FASTA
>7OBA_5 DNA-directed RNA polymerases I, II, and III subunit RPABC2 (chains F)
MSDNEDNFDGDDFDDVEEDEGLDDLENAEEEGQENVEILPSGERPQANQKRITTPYMTKY
ERARVLGTRALQIAMCAPVMVELEGETDPLLIAMKELKARKIPIIIRRYLPDGSYEDWGV
DELIITD
Sequence of entity 6 (G), FASTA
>7OBA_6 DNA-directed RNA polymerase I subunit RPA43 (chains G)
MAAGCSEAPRPAAASDGSLVGQAGVLPCLELPTYAAACALVNSRYSCLVAGPHQRHIALS
PRYLNRKRTGIREQLDAELLRYSESLLGVPIAYDNIKVVGELGDIYDDQGHIHLNIEADF
VIFCPEPGQKLMGIVNKVSSSHIGCLVHGCFNASIPKPEQLSAEQWQTMEINMGDELEFE
VFRLDSDAAGVFCIRGKLNITSLQFKRSEVSEEVTENGTEEAAKKPKKKKKKKDPETYEV
DSGTTKLADDADDTPMEESALQNTNNANGIWEEEPKKKKKKKKHQEVQDQDPVFQGSDSS
GYQSDHKKKKKKRKHSEEAEFTPPLKCSPKRKGKSNFL
Sequence of entity 7 (H), FASTA
>7OBA_7 DNA-directed RNA polymerases I, II, and III subunit RPABC3 (chains H)
MAGILFEDIFDVKDIDPEGKKFDRVSRLHCESESFKMDLILDVNIQIYPVDLGDKFRLVI
ASTLYEDGTLDDGEYNPTDDRPSRADQFEYVMYGKVYRIEGDETSTEAATRLSAYVSYGG
LLMRLQGDANNLHGFEVDSRVYLLMKKLAF
Sequence of entity 8 (I), FASTA
>7OBA_8 DNA-directed RNA polymerase I subunit RPA12 (chains I)
MSVMDLANTCSSFQSDLDFCSDCGSVLPLPGAQDTVTCIRCGFNINVRDFEGKVVKTSVV
FHQLGTAMPMSVEEGPECQGPVVDRRCPRCGHEGMAYHTRQMRSADEGQTVFYTCTNCKF
QEKEDS
Sequence of entity 9 (J), FASTA
>7OBA_9 DNA-directed RNA polymerases I, II, and III subunit RPABC5 (chains J)
MIIPVRCFTCGKIVGNKWEAYLGLLQAEYTEGDALDALGLKRYCCRRMLLAHVDLIEKLL
NYAPLEK
Sequence of entity 10 (K), FASTA
>7OBA_10 DNA-directed RNA polymerases I and III subunit RPAC2 (chains K)
MEEDQELERKISGLKTSMAEGERKTALEMVQAAGTDRHCVTFVLHEEDHTLGNSLRYMIM
KNPEVEFCGYTTTHPSESKINLRIQTRGTLPAVEPFQRGLNELMNVCQHVLDKFEASIKD
YKDQKASRNESTF
Sequence of entity 11 (L), FASTA
>7OBA_11 DNA-directed RNA polymerases I, II, and III subunit RPABC4 (chains L)
MDTQKDVQPPKQQPMIYICGECHTENEIKSRDPIRCRECGYRIMYKKRTKRLVVFDAR
Sequence of entity 12 (M), FASTA
>7OBA_12 DNA-directed RNA polymerase I subunit RPA49 (chains M)
MAAEVLPSARWQYCGAPDGSQRAVLVQFSNGKLQSPGNMRFTLYENKDSTNPRKRNQRIL
AAETDRLSYVGNNFGTGALKCNTLCRHFVGILNKTSGQMEVYDAELFNMQPLFSDVSVES
ELALESQTKTYREKMDSCIEAFGTTKQKRALNTRRMNRVGNESLNRAVAKAAETIIDTKG
VTALVSDAIHNDLQDDSLYLPPCYDDAAKPEDVYKFEDLLSPAEYEALQSPSEAFRNVTS
EEILKMIEENSHCTFVIEALKSLPSDVESRDRQARCIWFLDTLIKFRAHRVVKRKSALGP
GVPHIINTKLLKHFTCLTYNNGRLRNLISDSMKAKITAYVIILALHIHDFQIDLTVLQRD
LKLSEKRMMEIAKAMRLKISKRRVSVAAGSEEDHKLGTLSLPLPPAQTSDRLAKRRKIT
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| ZN | Zinc ion | Zn | 7 |
Primary citation
Cryo-EM structures of human RNA polymerase I. Misiaszek, A.D., Girbig, M., Grotsch, H. et al. Nat Struct Mol Biol (2021) 28:997-1008. DOI 10.1038/s41594-021-00693-4 · PubMed
Other PDB entries of the same protein (UniProt O95602 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 7OB9 2.7 Å, Cryo-EM structure of human RNA Polymerase I in elongation state
- 7VBB 2.81 Å, Structure of the post state human RNA Polymerase I Elongation Complex
- 7VBA 2.89 Å, Structure of the pre state human RNA Polymerase I Elongation Complex
- 7VBC 3.01 Å, Back track state of human RNA Polymerase I Elongation Complex
- 7OBB 3.3 Å, Cryo-EM structure of human RNA Polymerase I Open Complex
- 8A43 4.09 Å, Human RNA polymerase I
Browse structure collections
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