7OLC: Putative guanine nucleotide-binding protein

Name: PDB 7OLC: Thermophilic eukaryotic 80S ribosome at idle POST state
Published: 2022-01-26
License: https://creativecommons.org/publicdomain/zero/1.0/
Keywords: ribosome

Thermophilic eukaryotic 80S ribosome at idle POST state. Determined by electron microscopy at 2.9 Å resolution. Released 26 Jan 2022.

Method: Electron microscopy
Resolution: 2.9 Å
Organism: Chaetomium thermophilum var. thermophilum DSM 1495
Chains: 84
Atoms: 207,344
Mol. weight: 3315.12 kDa
Ligands: MG, ZN
Released: 26 Jan 2022

Explore 7OLC in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

7OLC contains 517 α-helices and 543 β-strands across 79 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 0 helices, 28 β-strands

Element	Residues	Length	Sheet
β-strand	5-11	7	31
β-strand	18-22	5	32
β-strand	30-35	6	32
β-strand	40-45	6	32
β-strand	53-58	6	32
β-strand	66-71	6	33
β-strand	77-82	6	33
β-strand	86-91	6	33
β-strand	99-102	4	33
β-strand	108-113	6	34
β-strand	120-124	5	34
β-strand	129-132	4	34
β-strand	138-142	5	34
β-strand	154-156	3	35
β-strand	164-167	4	35
β-strand	174-178	5	35
β-strand	184-188	5	35
β-strand	195-200	6	36
β-strand	206-211	6	36
β-strand	215-220	6	36
β-strand	226-231	6	36
β-strand	236-241	6	37
β-strand	247-252	6	37
β-strand	256-260	5	37
β-strand	265-270	6	37
β-strand	289-291	3	31
β-strand	297-300	4	31
β-strand	307-312	6	31

Chain C: 4 helices, 0 β-strands

Element	Residues	Length
α-helix	537-559	23
α-helix	561-565	5
α-helix	569-587	19
α-helix	593-612	20

Chain La: 6 helices, 6 β-strands

Element	Residues	Length	Sheet
α-helix	42-47	6
α-helix	65-68	4
β-strand	72-73	2	65
α-helix	78-81	4
α-helix	84-92	9
β-strand	98-103	6	66
α-helix	104-107	4
β-strand	111-112	2	65
β-strand	124-127	4	66
β-strand	129-130	2	65
α-helix	132-140	9
β-strand	144-147	4	66

Chain LA: 6 helices, 17 β-strands

Element	Residues	Length	Sheet
α-helix	6-9	4
α-helix	30-32	3
α-helix	34-38	5
β-strand	40-49	10	60
β-strand	58-64	7	60
β-strand	71-77	7	60
α-helix	78	1
β-strand	79	1	61
β-strand	83	1	62
β-strand	87-91	5	60
β-strand	101-103	3	60
β-strand	112-114	3	60
β-strand	116	1	63
β-strand	126	1	63
β-strand	134-140	7	60
β-strand	145-149	5	60
β-strand	155-159	5	60
β-strand	163-166	4	60
β-strand	169	1	61
α-helix	182-189	8
α-helix	201-203	3
β-strand	224-225	2	64
β-strand	237-238	2	64

Chain Lb: 5 helices, 1 β-strand

Element	Residues	Length	Sheet
α-helix	12-16	5
α-helix	17-19	3
β-strand	22	1	1
α-helix	23-26	4
α-helix	37-55	19
α-helix	56-58	3

Chain LB: 17 helices, 17 β-strands

Element	Residues	Length	Sheet
α-helix	9-10	2
α-helix	33-35	3
α-helix	40-41	2
β-strand	42-43	2	70
β-strand	45-59	15	71
β-strand	71-81	11	71
α-helix	82-83	2
β-strand	84-95	12	72
β-strand	98-106	9	72
α-helix	112-115	4
α-helix	116-118	3
α-helix	131-134	4
α-helix	143-155	13
β-strand	158-165	8	72
α-helix	167-169	3
β-strand	179-183	5	72
β-strand	184-185	2	70
α-helix	189-197	9
β-strand	200	1	72
β-strand	203-204	2	72
α-helix	206-209	4
β-strand	215-221	7	71
α-helix	222-223	2
β-strand	224-228	5	73
α-helix	230-233	4
α-helix	236-240	5
β-strand	269-272	4	73
β-strand	275-287	13	71
α-helix	308	1
β-strand	321-326	6	71
β-strand	336-341	6	71
β-strand	357-360	4	71
α-helix	374-381	8
α-helix	385-387	3

Chain Lc: 5 helices, 4 β-strands

Element	Residues	Length	Sheet
α-helix	12-23	12
β-strand	25-28	4	81
α-helix	31-39	9
β-strand	44-47	4	81
α-helix	53-66	14
β-strand	70-72	3	81
α-helix	77-82	6
β-strand	92-97	6	81
α-helix	103-105	3

Chain LC: 23 helices, 11 β-strands

Element	Residues	Length	Sheet
β-strand	6-11	6	78
β-strand	14-22	9	78
α-helix	23-24	2
α-helix	25-28	4
α-helix	33-43	11
β-strand	64-65	2	79
β-strand	76-77	2	79
β-strand	89	1	79
α-helix	116-129	14
α-helix	133-138	6
β-strand	151-153	3	78
α-helix	166-175	10
α-helix	179-187	9
β-strand	189-191	3	80
α-helix	195-199	5
β-strand	203-205	3	80
β-strand	210-213	4	78
α-helix	222-227	6
β-strand	233-236	4	78
α-helix	237-239	3
α-helix	242-245	4
α-helix	247-249	3
β-strand	255-258	4	78
α-helix	259-270	12
α-helix	287-291	5
α-helix	294-298	5
α-helix	300-302	3
α-helix	309-311	3
α-helix	323-329	7
α-helix	333-338	6
α-helix	341-343	3
α-helix	344-347	4
α-helix	350-354	5
α-helix	358-362	5

70 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.

Molecules and chains

Molecule	Chains	Type	Length	Organism	UniProt
26S rRNA	1	RNA	3337	Chaetomium thermophilum var. thermophilum DSM 1495
18S rRNA	2	RNA	1796	Chaetomium thermophilum var. thermophilum DSM 1495
5S rRNA	3	RNA	120	Chaetomium thermophilum var. thermophilum DSM 1495
5.8S rRNA	4	RNA	156	Chaetomium thermophilum var. thermophilum DSM 1495
Putative guanine nucleotide-binding protein	A	protein	316	Chaetomium thermophilum var. thermophilum DSM 1495	G0S9U0 (AlphaFold model)
HABP4_PAI-RBP1 domain-containing protein	B	protein	302	Chaetomium thermophilum var. thermophilum DSM 1495	G0S428 (AlphaFold model)
Ribosome-associated molecular chaperone SSB1	C	protein	614	Chaetomium thermophilum var. thermophilum DSM 1495	G0SCU5 (AlphaFold model)
60S ribosomal protein L2-like protein	LA	protein	254	Chaetomium thermophilum var. thermophilum DSM 1495	G0S4P8 (AlphaFold model)
60S ribosomal protein L3-like protein	LB	protein	392	Chaetomium thermophilum var. thermophilum DSM 1495	G0RXW1
60S ribosomal protein L4-like protein	LC	protein	365	Chaetomium thermophilum var. thermophilum DSM 1495	G0SFC3
60S ribosomal protein l5-like protein	LD	protein	304	Chaetomium thermophilum var. thermophilum DSM 1495	G0SEG2
60S ribosomal protein L6	LE	protein	200	Chaetomium thermophilum var. thermophilum DSM 1495	G0S0D6

71 more molecules are not listed.

Sequence of entity 1 (1), FASTA

>7OLC_1 26S rRNA (chains 1)
AGGUUGACCUCGGAUCAGGUAGGAGGACCCGCUGAACUUAAGCAUAUCAAUAAGCGGAGG
AAAAGAAACCAACAGGGAUUGCCCUAGUAACGGCGAGUGAAGCGGCAACAGCUCAAAUUU
GAAAGCUGGCUUCGGCCCGCGUUGUAAUUUGGAGAGGAUGCUUUGGGCGAGGCUCCUUCU
GAGUUCCCUGGAACGGGACGCCACAGAGGGUGAGAGCCCCGUAUAGUUGGAAGCCAAGCC
UGUGUAAAGCUCCUUCGACGAGUCGAGUAGUUUGGGAAUGCUGCUCAAAAUGGGAGGUAA
AUUUCUUCUAAAGCUAAAUACCGGCCAGAGACCGAUAGCGCACAAGUAGAGUGAUCGAAA
GAUGAAAAGCACUUUGAAAAGAGGGUUAAAUAGCACGUGAAAUUGUUGAAAGGGAAGCGC
UUGUGACCAGACUUGCGCCCGGCGGAUCAUCCGGUGUUCUCACCGGUGCACUCCGCCGGG
CUCAGGCCAGCAUCGGUUCUGGCGGGGGGAUAAAGGCCCAGGGAAUGUGGCUCCUCCGGG
AGUGUUAUAGCCCUGGGUGUAAUACCCUCGCCGGGACCGAGGACCGCGCUCUGCAAGGAU
GCUGGCGUAAUGGUCACCAGCGACCCGUCUUGAAACACGGACCAAGGAGUCAAGGUUUUG
CGCGAGUGUUUGGGUGUAAAACCCGCACGCGUAAUGAAAGUGAACGUAGGUGAGAGCUUC
GGCGCAUCAUCGACCGAUCCUGAUGUAUUCGGAUGGAUUUGAGUAGGAGCGUUAAGCCUU
GGACCCGAAAGAUGGUGAACUAUGCUUGGAUAGGGUGAAGCCAGAGGAAACUCUGGUGGA
GGCUCGCAGCGGUUCUGACGUGCAAAUCGAUCGUCAAAUCUGAGCAUGGGGGCGAAAGAC
UAAUCGAACCAUCUAGUAGCUGGUUACCGCCGAAGUUUCCCUCAGGAUAGCAGUGUCGAC
CUUCAGUUUUAUGAGGUAAAGCGAAUGAUUAGGGACUCGGGGGCGAUUUUUAGCCUUCAU
CCAUUCUCAAACUUUAAAUAUGUAAGAAGCCCUUGUUACUUAACUGAACGUGGGCAUUCG
AAUGUAUCGACACUAGUGGGCCAUUUUUGGUAAGCAGAACUGGCGAUGCGGGAUGAACCG
AACGCGGGGUUAAGGUGCCGGAGUGGACGCUCAUCAGACACCACAAAAGGCGUUAGUACA
UCUUGACAGCAGGACGGUGGCCAUGGAAGUCGGAAUCCGCUAAGGACUGUGUAACAACUC
ACCUGCCGAAUGUACUAGCCCUGAAAAUGGAUGGCGCUCAAGCGUCCCACCCAUACCCCG
CCCUCAGGGUAGAAACGAUGCCCUGAGGAGUAGGCGGCCGUGGAGGUCAGUGACGAAGCC
UAGGGCGUGAGCCCGGGUCGAACGGCCUCUAGUGCAGAUCUUGGUGGUAGUAGCAAAUAC
UUCAAUGAGAACUUGAAGGACCGAAGUGGGGAAAGGUUCCAUGUGAACAGCGGUUGGACA
UGGGUUAGUCGAUCCUAAGCCAUAGGGAAGUUCCGUUUCAAAGGGGCACUCGUGCCCCGU
GUGGCGAAAGGGAAGCCGGUUAAUAUUCCGGCACCUGGAUGUGGGUUUUGCGCGGCAACG
CAACUGAACGCGGAGACGACGGCGGGGGCCCCGGGCAGAGUUCUCUUUUCUUCUUAACGG
UCUAUCACCCUGGAAACAGUUUGUCUGGAGAUAGGGUUUAAUGGCCGGAAGAGCCCGACA
CUUCUGUCGGGUCCGGUGCGCUCUCGACGUCCCUUGAAAAUCCGCGGGAGGGAAUAAUUC
UCACGCCAGGUCGUACUCAUAACCGCAGCAGGUCCCCAAGGUGAACAGCCUCUGGUUGAU
AGAACAAUGUAGAUAAGGGAAGUCGGCAAAAUAGAUCCGUAACUUCGGGAAAAGGAUUGG
CUCUAAGGGUUGGGCACGUUGGGCUUUGGGCGGACGCCCUGGGAGCAGAGGGCCUCUAGC
CGGGCAACCGGCCGGCGGCCCUCAGCACCCGGGGUUGAAGCCCUUAGCAGGCUUCGGCCG
UCCGGCGUGCGGUUAACAACCAACUUAGAACUGGUACGGACAGGGGGAAUCUGACUGUCU
AAUUAAAACAUAGCAUUGCGAUGGCCAGAAAGUGGUGUUGACGCAAUGUGAUUUCUGCCC
AGUGCUCUGAAUGUCAAAGUGAAGAAAUUCAACCAAGCGCGGGUAAACGGCGGGAGUAAC
UAUGACUCUCUUAAGGUAGCCAAAUGCCUCGUCAUCUAAUUAGUGACGCGCAUGAAUGGA
UUAACGAGAUUCCCACUGUCCCUAUCUACUAUCUAGCGAAACCACAGCCAAGGGAACGGG
CUUGGCAAAAUCAGCGGGGAAAGAAGACCCUGUUGAGCUUGACUCUAGUUUGACAUUGUG
AAAAGACAUAGGAGGUGUAGAAUAGGUGGGAGCUUCGGCGCCAGUGAAAUACCACUACUC
CUAUUGUUUUUUUACUUAUUCAAUGAAGCGGGGCUGGACUUGCGUCCAACUUCUGGAGUU
AAGGUCCUUCGCGGGCCGACCCGGGUUGAAGACAUUGUCAGGUGGGGAGUUUGGCUGGGG
CGGCACAUCUGUUAAACCAUAACGCAGGUGUCCUAAGGGGGGCUCAUGGAGAACAGAAAU
CUCCAGUAGAACAAAAGGGUAAAAGUCCCCUUGAUUUUGAUUUUCAGUGUGAAUACAAAC
CAUGAAAGUGUGGCCUAUCGAUCCUUUAGUCCCUCGAAAUUUGAGGCUAGAGGUGCCAGA
AAAGUUACCACAGGGAUAACUGGCUUGUGGCGGCCAAGCGUUCAUAGCGACGUCGCUUUU
UGAUCCUUCGAUGUCGGCUCUUCCUAUCAUACCGAAGCAGAAUUCGGUAAGCGUUGGAUU
GUUCACCCACUAAUAGGGAACGUGAGCUGGGUUUAGACCGUCGUGAGACAGGUUAGUUUU
ACCCUACUGAUGAACUCGUCGCAAUGGUAAUUCAGCUUAGUACGAGAGGAACCGCUGAUU
CAGAUAAUUGGUUUUUGCGGUUGUCCGACCGGGCAGUGCCGCGAAGCUACCAUCUGCUGG
AUAAUGGCUGAACGCCUCUAAGUCAGAAUCCAUGCCAGAACGCGACGAUACUACCCGCAC
GUUGUAGACGUAUAAGAAUAGGCUCCGGCCUCGUAUCCUAGCAGGCGAUUCCUCCGCCGG
CCUCGAAGUGGCCGUCGGUAAUUCGCGUAUUGCAAUUUAGACACGCGCGGGAUCAAAUCC
UUUGCAGACGACUUAGAUGUGCGAAAGGGUCCUGUAAGCAGUAGAGUAGCCUUGUUGUUA
CGAUCUGCUGAGGGUAAGCCCUCCUUCGCCUAGAUUU

Sequence of entity 2 (2), FASTA

>7OLC_2 18S rRNA (chains 2)
UACCUGGUUGAUUCUGCCAGUAGUCAUAUGCUUGUCUCAAAGAUUAAGCCAUGCAUGUCU
AAGUAUAAGCAAUUAUACAGCGAAACUGCGAAUGGCUCAUUAAAUCAGUUAUCGUUUAUU
UGAUAGUACCUUACUACAUGGAUAACCGUGGUAAUUCUAGAGCUAAUACAUGCUGAAAAU
CCCGACUUCGGAAGGGAUGUAUUUAUUAGAUUAAAAACCAAUGCCCUUCGGGGCUUUCUG
GUGAUUCAUAAUAACUUCUCGAAUCGCACGGCCUUGCGCCGGCGAUGGUUCAUUCAAAUU
UCUGCCCUAUCAACUUUCGACGGCUGGGUAUUGGCCAGCCGUGGUGACAACGGGUAACGG
AGGGUUAGGGCUCGACCCCGGAGAAGGAGCCUGAGAAACGGCUACUACAUCCAAGGAAGG
CAGCAGGCGCGCAAAUUACCCAAUCCCGACACGGGGAGGUAGUGACAAUAAAUACUGAUA
CAGGGCUCUUUCGGGUCUUGUAAUUGGAAUGAGUACAAUUUAAAUCCCUUAACGAGGAAC
AAUUGGAGGGCAAGUCUGGUGCCAGCAGCCGCGGUAAUUCCAGCUCCAAUAGCGUAUAUU
AAAGUUGUUGAGGUUAAAAAGCUCGUAGUUGAACCUUGGGCCUAGCCCGCCGGUCCGCCU
CACCGCGUGCACUGGCUGGGCUGGGCCUUUCCUUCUGGAGAACCGCAUGCCCUUCACUGG
GUGUGUCGGGGAACCAGGACUUUUACUCUGAACAAAUUAGAUCGCUUAAAGAAGGCCUAU
GCUUGAAUACAUUAGCAUGGAAUAAUAGAAUAGGACGUGUGGUUCUAUUUUGUUGGUUUC
UAGGACCGCCGUAAUGAUUAAUAGGGACAGUCGGGGGCGUCAGUAUUCAAUUGUCAGAGG
UGAAAUUCUUGGAUUUAUUGAAGACUAACAACUGCGAAAGCAUUCGCCAAGGAUGUUUUC
AUUAAUCAGGAACGAAAGUUAGGGGAUCGAAGACGAUCAGAUACCGUCGUAGUCUUAACC
AUAAACUAUGCCGAUUAGGGAUCGGACGGCGUUUAUUUUUGACCCGUUCGGCACCUUACG
AUAAAUCAAAAUGUUUGGGCUCCUGGGGGAGUAUGGUCGCAAGGCUGAAACUUAAAGAAA
UUGACGGAAGGGCACCACCAGGGGUGGAGCCUGCGGCUUAAUUUGACXCAACACGGGGAA
ACUCACCAGGUCCAGACACGAUGAGGAUUGACAGAUUGAGAGCUCUUUCUUGAUUUCGUG
GGUGGUGGUGCAUGGCCGUUCUUAGUUGGUGGAGUGAUUUGUCUGCUUAAUUGCGAUAAC
GAACGAGACCUUAACCUGCUAAAUAGCCCGUAUUGCCUUGGCAGUACGCCGGCUUCUUAG
AGGGACUAUCGGCUCAAGCCGAUGGAAGUUUGAGGCAAUAACAGGUCUGUGAUGCCCUUA
GAUGUUCUGGGCCGCACGCGCGCUACACUGACAGAGCCAGCGAGUACUCCCUUGGCCGAG
AGGCCCGGGUAAUCUUGUUAAACUCUGUCGUGCUGGGGAUAGAGCAUUGCAAUUAUUGCU
CUUCAACGAGGAAUCCCUAGUAAGCGCAAGUCAUCAGCUUGCGUUGAUUACGUCCCUGCC
CUUUGUACACACCGCCCGUCGCUACUACCGAUUGAACGGCUCAGUGAGGCUUUCGGACUG
GCCCAGAGAGGUCGGCAACGACCACUCAGGGCCGGAAAGUUAUCCAAACUCGGUCGUUUA
GAGGAAGUAAAAGUCGUAACAAGGUCUCCGUAGGUGAACCUGCGGAGGGAUCAUUU

Sequence of entity 3 (3), FASTA

>7OLC_3 5S rRNA (chains 3)
ACAUACGACCAUACCUAGUGGAAAACUCGGGAUCCCGUCCGCUCUCCCAUAGAUAAGCCA
CUAAGGGCGGGGUUAGUACUCAGGUCGGUGACGACUGGGGAAUCCCCCGUGUUGUAUGUU

Sequence of entity 4 (4), FASTA

>7OLC_4 5.8S rRNA (chains 4)
AAACUUUCAACAACGGAUCUCUUGGUUCUGGCAUCGAUGAAGAACGCAGCGAAAUGCGAU
AAGUAAUGUGAAUUGCAGAAUUCCGUGAAUCAUCGAAUCUUUGAACGCACAUUGCGCCCG
CCGGUAUUCCGGCGGGCAUGCCUGUUCGAGCGUCAU

Sequence of entity 5 (A), FASTA

>7OLC_5 Putative guanine nucleotide-binding protein (chains A)
MAEQLILKGTLEGHNGWVTSLATSMENPNMLLSGSRDKTLIIWNLTRDETQYGYPKRRLH
GHSHIVSDCVISSDGAYALSASWDKTLRLWELSTGTTTRRFVGHTGDVLSVSFSADNRQI
VSGSRDKTIKLWNTLGDCKYTITDKGHTEWVSCVRFSPNPQNPVIVSCGWDKLVKVWDLQ
SCKLQTDHIGHTGYINTVTISPDGSLCASGGKDGTTMLWDLNESKHLYSLNANDEIHALV
FSPNRYWLCAATASSIIIFDLEKKSKVDELKPEFQNVGKKSREPECVSLAWSADGQTLFA
GYTDGIIRAWGVMSRA

Sequence of entity 6 (B), FASTA

>7OLC_6 HABP4_PAI-RBP1 domain-containing protein (chains B)
MSVASKNPFDILGNTEDETPVVPVKAVEKTSTHTAKRNTDGLPPKGHAAGNRRGGANVSG
NEAAFRDRNAGRDANRGKPTDEAAPRGGRRGGFRGRGKREEGDRHPTRSAPRSNSEKQAS
QGWGATEGEAELKDEQAAEEIAQTEKKEAAEGEAAPEAEAKEEEPQEKVLTYDQYLAKLA
EKKLALEQENALKVRKPNEGAEDKFKGLKPLTKNEDEALFAPTVQKKERQRERKTKQIIE
IENRYVEERPRGGRGGRGARDGARGGRGRGGAPRGGRGGAKENAAPAINTNDETAFPSLG
SR

Sequence of entity 7 (C), FASTA

>7OLC_7 Ribosome-associated molecular chaperone SSB1 (chains C)
MAEEVYDGAIGIDLGTTYSCVAVYEGTNVEIIANEQGNFTTPSFVSFTENERLIGEAAKN
QAAMNPANTIFDVKRLIGRRFDDPTVKKDMESWPFKVVDDNGNPKVEVQYLGQTHTFSPQ
EISAMVLTKMKEIAETKLGKKVEKAVITVPAYFNDNQRQATKDAGAIAGLNVLRIINEPT
AAAIAYGLGSGKSDKERNVLIYDLGGGTFDVSLLNIQGGVFTVKATAGDTHLGGQDFDTN
LLEYCKKEFTRKTKKDLSGDARALRRLRTACERAKRTLSSGAQTTIEIDSLFDGEDFNIQ
ITRARFEDLNAKAFAGTLEPVAQVLKDAGIEKHQVDEIVLVGGSTRIPRIQKLLSEFFDG
KKLEKSINPDEAVAYGAAVQAGILSGKATSADTSDLLLLDVVPLSLGVAMEGNIFAPVVP
RGQTVPTIKKRTFTTVADNQQTVQFPVYQGERVNCEDNTLLGEFTLAPIPPMKAGEPVLE
VVFEVDVNGILKVTATEKTSGRSANITIANSVGKLSTDEIEKMISDAEKFKSKDEAFSKR
FEAKQQLESYISRVEEIISDPTLSLKLKRGQKDKIEQALSEAMAQLEIEDSTADELKKKE
LALKRLVTKAMASR

Sequence of entity 8 (LA), FASTA

>7OLC_8 60S ribosomal protein L2-like protein (chains LA)
MGRVIRNQRKGRGSVFTAHTRLRKAPAKFRPLDYAERHGYIRGIVKEIIHDPGRGAPLAR
VVFRSPYKYKQITETFIANEGMYTGQFIYAGKNAALTVGNILPLSSVPEGTVVSNVEEKP
GDRGALGRTSGNYVTVVGHNPDEGKTRIKLPSGAKKVVPSSSRGMIGIVAGGGRTDKPLL
KASRAKHKFAVKRNRWPKTRGVAMNPVDHPHGGGNHQHIGKASTISRYAAQGQKAGLIAA
RRTGLLRGTQKTKE

Sequence of entity 9 (LB), FASTA

>7OLC_9 60S ribosomal protein L3-like protein (chains LB)
MSHRKYEAPRHGSLAFLPRKRAARHRGRVKSFPKDDPKKPVHLTAAMGYKAGMTTIVRDL
DRPGAKAHKKEVVEAVTIIDCPPMVVVGLVGYIETPRGLRSLTTVWAEHLSDEVKRRFYK
NWYKSKKKAFTKYAKKYAENNGASITRELERIKKYCTVVRVLAHTQIRKTPLKQKKAHLM
EIQINGGSVADKVEFGRSLFEKPVTIDTIFEKDEMIDVIAVTKGHGFVGVTARWGTKKLP
RKTHKGLRKVACIGAWHPSHVQWTVARAGQMGYHHRTSVNHKIYRIGKGDDEANASTETD
LTKKKITPMGGFVRYGEVNNDYVMIKGSVPGVKKRIMTLRKSLFTHTSRKALEKVELKWI
DTSSEFGHGAFQTAAEKKQFMGTLKKDLQTSA

Sequence of entity 10 (LC), FASTA

>7OLC_10 60S ribosomal protein L4-like protein (chains LC)
MASRPTVTVFGADGKPTGATEVLPKVFSAPIRPDIVKHVHTGMAKNKRQPYAVSEKAGHQ
TSAESWGTGRAVARIPRVSGGGTHRAGQGAFGNMCRSGRMFAPTKIWRKWHVKINQGQKR
FATASALAASAVAPLLMARGHQVSTVPEVPLVVDSAAVAGDAVAKTAAAYKLLKAIGAGP
DVEKVKKSKKLRAGKGKMRGRRHRQRRGPLIVYSPEHDGKELVKGFRNIPGVETCPVDAL
NLLQLAPGGHLGRFIVWTSAAIKQLDAVYESKKGFFLPANIVSQADLSRLINSTEIQSVL
RAPKGEARTKRACVQKKNPLRNKQIMLRLNPYASTFAKEKLGEVKAEEGKPPKVPASFKE
LLHEA

Sequence of entity 11 (LD), FASTA

>7OLC_11 60S ribosomal protein l5-like protein (chains LD)
MAFHKLVKNSAYYSRFQTKFKRRRQGKTDYYARKRLITQAKNKYNAPKYRLVVRFTNRDI
ITQMVTSEINGDKIFAAAYSHELRAYGINHGLTNWAAAYATGLLLARRVLAKLGLDKTFT
GVEEPNGEYTLTEAAETEDGERRPFKAILDVGLARTSTGARVFGVMKGASDGGIFIPHSE
NRFPGYDIETEELDTEVLKKYIYGGHVAEYMETLADDDEERYKSQFVKYIEDDVEADSLE
ELYAEAHKQIRADPFRKYVSDAPKKSKEEWKAESLKYKKAKLSREERKARVEAKIKQLLA
EQDE

Sequence of entity 12 (LE), FASTA

>7OLC_12 60S ribosomal protein L6 (chains LE)
MSAAPTTKTFGKGTRTVPAPSEKAQKWYPAEDEAQPKKVRKAVRPWTPRKSLQPGTVLIL
LAGRFRGKRVVLLKCLDQGVLLVTGPFKINGVPLRRVNARYVIATSVKVDLTGVDQAKID
EVAQPKYFTAEKAKEKASEEAFFKQGEKPQKKPVSSTRAADQKAIDKALIANIKKVDMLA
SYLASSFSLRKGDKPHLMKF

Ligands and cofactors

ID	Name	Formula	Copies
MG	Magnesium ion	Mg	571
ZN	Zinc ion	Zn	8

Primary citation

High-resolution structures of a thermophilic eukaryotic 80S ribosome reveal atomistic details of translocation. Kisonaite, M., Wild, K., Lapouge, K. et al. Nat Commun (2022) 13:476-476. DOI 10.1038/s41467-022-27967-9 · PubMed

Other PDB entries of the same protein (UniProt G0S9U0 (AlphaFold model), which also has an AlphaFold model), best resolution first:

7OLD 3.0 Å, Thermophilic eukaryotic 80S ribosome at pe/E (TI)-POST state
8OO0 3.1 Å, Chaetomium thermophilum Methionine Aminopeptidase 2 autoproteolysis product at the 80S…
7Z3N 3.2 Å, Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-1…
7Z3O 3.3 Å, Cryo-EM structure of the ribosome-associated RAC complex on the 80S ribosome - RAC-2…

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