8GW3: Human TAK1 kinase domain fused with TAB1

Crystal structure of human TAK1 kinase domain fused with TAB1. Determined by X-ray diffraction at 2.05 Å resolution. Released 20 Sept 2023.

Method
X-ray diffraction
Resolution
2.05 Å
Organism
Homo sapiens
Chains
4
Atoms
9,458
Mol. weight
146.96 kDa
Released
20 Sept 2023

Explore 8GW3 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

8GW3 contains 80 α-helices and 56 β-strands across 4 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 20 helices, 14 β-strands

ElementResiduesLengthSheet
β-strand29-3021
α-helix33-353
β-strand36-4051
β-strand50-5561
β-strand58-6471
α-helix68-769
α-helix78-825
β-strand8912
β-strand92-9761
β-strand100-10561
β-strand110-11122
α-helix112-1176
β-strand12313
α-helix127-14620
α-helix151-1533
α-helix159-1613
β-strand162-16542
β-strand170-17342
α-helix182-1854
α-helix193-1953
α-helix198-2036
α-helix208-22417
α-helix237-2448
α-helix249-2513
β-strand25214
α-helix257-26610
α-helix271-2733
α-helix275-2762
α-helix277-28711
α-helix288-2903
α-helix297-2982
β-strand30113
β-strand47814
α-helix485-49511
Chain B: 21 helices, 14 β-strands
ElementResiduesLengthSheet
β-strand29-3025
α-helix33-353
β-strand36-4055
β-strand50-5565
β-strand58-6475
α-helix68-769
α-helix78-825
β-strand8916
β-strand92-9765
β-strand100-10565
β-strand110-11126
α-helix112-1176
β-strand12317
α-helix127-14620
α-helix151-1533
α-helix159-1613
β-strand162-16546
β-strand170-17346
α-helix182-1876
α-helix193-1953
α-helix198-2014
α-helix204-2063
α-helix208-22417
α-helix236-2449
α-helix249-2513
β-strand25218
α-helix257-26610
α-helix271-2733
α-helix275-2762
α-helix277-28711
α-helix288-2903
α-helix297-2982
β-strand30117
β-strand47818
α-helix485-49511
Chain C: 19 helices, 14 β-strands
ElementResiduesLengthSheet
β-strand29-3139
α-helix33-353
β-strand36-4059
β-strand50-5569
β-strand58-6479
α-helix68-8114
β-strand89110
β-strand92-9769
β-strand100-10569
β-strand110-111210
α-helix112-1176
β-strand123111
α-helix127-14620
α-helix151-1533
α-helix159-1613
β-strand162-165410
β-strand170-173410
α-helix193-1953
α-helix198-2025
α-helix204-2063
α-helix208-22417
α-helix236-2449
α-helix249-2513
β-strand252112
α-helix257-26610
α-helix271-2733
α-helix275-2762
α-helix277-28711
α-helix288-2903
α-helix297-2982
β-strand301111
β-strand478112
α-helix485-49511
Chain D: 20 helices, 14 β-strands
ElementResiduesLengthSheet
β-strand29-30213
α-helix33-353
β-strand36-40513
β-strand50-55613
β-strand58-64713
α-helix68-8316
β-strand89114
β-strand92-97613
β-strand100-105613
β-strand110-111214
α-helix112-1176
β-strand123115
α-helix127-14620
α-helix151-1533
α-helix159-1613
β-strand162-165414
β-strand170-173414
α-helix185-1873
α-helix193-1953
α-helix198-2025
α-helix204-2063
α-helix208-22417
α-helix236-2449
α-helix249-2513
β-strand252116
α-helix257-26610
α-helix271-2733
α-helix275-2762
α-helix277-28711
α-helix288-2903
α-helix297-2982
β-strand301115
β-strand478116
α-helix485-49410

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Mitogen-activated protein kinase kinase kinase 7, TGF-beta-activated kinase 1 and MAP3K7-binding…A, B, C, Dprotein326Homo sapiensO43318 (AlphaFold model), Q15750 (AlphaFold model)
Sequence of entity 1 (A, B, C, D), FASTA
>8GW3_1 Mitogen-activated protein kinase kinase kinase 7, TGF-beta-activated kinase 1 and MAP3K7-binding protein 1 (chains A, B, C, D)
AGEMIEAPSQVLNFEEIDYKEIEVEEVVGRGAFGVVCKAKWRAKDVAIKQIESESERKAF
IVELRQLSRVNHPNIVKLYGACLNPVCLVMEYAEGGSLYNVLHGAEPLPYYTAAHAMSWC
LQCSQGVAYLHSMQPKALIHRDLKPPNLLLVAGGTVLKICDFGTACDIQTHMTNNKGSAA
WMAPEVFEGSNYSEKCDVFSWGIILWEVITRRKPFDEIGGPAFRIMWAVHNGTRPPLIKN
LPKPIESLMTRCWSKDPSQRPSMEEIVKIMTHLMRYFPGADEPLQYPCQHSLPPGEDGRV
EPYVDFAEFYRLWSVDHGEQSVVTAP

Primary citation

Crystal structure of human TAK1 kinase domain fused with TAB1. Liu, J., Sun, W., Gao, J. To be published.

Other PDB entries of the same protein (UniProt O43318 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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