9GBK: Blm10-20S proteasome complex from pre1-1
Blm10-20S proteasome complex from pre1-1. Determined by electron microscopy at 2.39 Å resolution. Released 11 Sept 2024.
- Method
- Electron microscopy
- Resolution
- 2.39 Å
- Organism
- Saccharomyces cerevisiae
- Chains
- 29
- Atoms
- 64,984
- Mol. weight
- 978.59 kDa
- Released
- 11 Sept 2024
Explore 9GBK in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
9GBK contains 324 α-helices and 397 β-strands across 29 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain 1: 7 helices, 15 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 11-16 | 6 | 1 |
| β-strand | 21-26 | 6 | 1 |
| β-strand | 29-31 | 3 | 2 |
| β-strand | 34-37 | 4 | 2 |
| β-strand | 43-47 | 5 | 3 |
| β-strand | 50-56 | 7 | 3 |
| α-helix | 58-78 | 21 | |
| α-helix | 82-85 | 4 | |
| α-helix | 86-98 | 13 | |
| β-strand | 107-114 | 8 | 3 |
| β-strand | 120-125 | 6 | 3 |
| β-strand | 131-134 | 4 | 3 |
| β-strand | 136-140 | 5 | 1 |
| α-helix | 143-145 | 3 | |
| α-helix | 147-153 | 7 | |
| β-strand | 160 | 1 | 4 |
| β-strand | 169 | 1 | 4 |
| α-helix | 170-172 | 3 | |
| α-helix | 177-194 | 18 | |
| β-strand | 195 | 1 | 5 |
| β-strand | 201-207 | 7 | 1 |
| β-strand | 212-218 | 7 | 1 |
Chain 2: 7 helices, 16 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 7 | 1 | 10 |
| β-strand | 11-16 | 6 | 11 |
| β-strand | 19-25 | 7 | 11 |
| β-strand | 27 | 1 | 12 |
| β-strand | 33 | 1 | 13 |
| β-strand | 37 | 1 | 12 |
| β-strand | 42-45 | 4 | 14 |
| β-strand | 49-55 | 7 | 14 |
| β-strand | 56 | 1 | 10 |
| α-helix | 57-74 | 18 | |
| α-helix | 89-105 | 17 | |
| β-strand | 112-119 | 8 | 14 |
| β-strand | 125-131 | 7 | 14 |
| α-helix | 132-134 | 3 | |
| β-strand | 137-138 | 2 | 14 |
| β-strand | 141-143 | 3 | 11 |
| α-helix | 147-155 | 9 | |
| α-helix | 162-167 | 6 | |
| α-helix | 170-187 | 18 | |
| β-strand | 188 | 1 | 15 |
| β-strand | 194-201 | 8 | 11 |
| β-strand | 205-213 | 9 | 11 |
| α-helix | 220-224 | 5 | |
Chain 3: 113 helices, 24 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 82-88 | 7 | |
| α-helix | 97-103 | 7 | |
| α-helix | 133-152 | 20 | |
| α-helix | 164-170 | 7 | |
| α-helix | 240-250 | 11 | |
| α-helix | 251-253 | 3 | |
| α-helix | 257-270 | 14 | |
| β-strand | 274 | 1 | 18 |
| α-helix | 281-290 | 10 | |
| β-strand | 295 | 1 | 19 |
| β-strand | 298 | 1 | 19 |
| α-helix | 300-307 | 8 | |
| β-strand | 311 | 1 | 20 |
| α-helix | 313-321 | 9 | |
| α-helix | 339-355 | 17 | |
| α-helix | 356-358 | 3 | |
| β-strand | 359 | 1 | 20 |
| α-helix | 366-377 | 12 | |
| α-helix | 383-393 | 11 | |
| β-strand | 398 | 1 | 21 |
| β-strand | 403 | 1 | 21 |
| α-helix | 404-407 | 4 | |
| α-helix | 408-415 | 8 | |
| α-helix | 422-425 | 4 | |
| α-helix | 429-444 | 16 | |
| β-strand | 458 | 1 | 22 |
| β-strand | 460 | 1 | 23 |
| β-strand | 461 | 1 | 22 |
| β-strand | 463 | 1 | 23 |
| α-helix | 465-477 | 13 | |
| α-helix | 478-482 | 5 | |
| α-helix | 488-496 | 9 | |
| α-helix | 505-522 | 18 | |
| α-helix | 531-556 | 26 | |
| α-helix | 568-578 | 11 | |
| α-helix | 582-586 | 5 | |
| α-helix | 591-598 | 8 | |
| α-helix | 600-606 | 7 | |
| α-helix | 612-627 | 16 | |
| α-helix | 635-652 | 18 | |
| α-helix | 656-670 | 15 | |
| α-helix | 678-693 | 16 | |
| β-strand | 697 | 1 | 24 |
| α-helix | 709-713 | 5 | |
| α-helix | 714-726 | 13 | |
| α-helix | 730-732 | 3 | |
| α-helix | 738-742 | 5 | |
| α-helix | 744-747 | 4 | |
| α-helix | 751-765 | 15 | |
| α-helix | 772-787 | 16 | |
| β-strand | 789 | 1 | 24 |
| α-helix | 791-806 | 16 | |
| α-helix | 819-831 | 13 | |
| α-helix | 833-835 | 3 | |
| α-helix | 836-852 | 17 | |
| α-helix | 870-882 | 13 | |
| α-helix | 893-906 | 14 | |
| α-helix | 910-916 | 7 | |
| α-helix | 918-928 | 11 | |
| β-strand | 931-932 | 2 | 25 |
| α-helix | 957-960 | 4 | |
| β-strand | 969-970 | 2 | 25 |
| α-helix | 974-1000 | 27 | |
| α-helix | 1006-1025 | 20 | |
| α-helix | 1027-1029 | 3 | |
| α-helix | 1161-1164 | 4 | |
| α-helix | 1167-1193 | 27 | |
| α-helix | 1199-1213 | 15 | |
| α-helix | 1229-1230 | 2 | |
| α-helix | 1231-1237 | 7 | |
| α-helix | 1249-1264 | 16 | |
| β-strand | 1271-1272 | 2 | 26 |
| α-helix | 1275-1288 | 14 | |
| α-helix | 1293-1309 | 17 | |
| β-strand | 1310-1311 | 2 | 26 |
| α-helix | 1313-1330 | 18 | |
| α-helix | 1334-1344 | 11 | |
| α-helix | 1347-1353 | 7 | |
| α-helix | 1360-1371 | 12 | |
| α-helix | 1378-1392 | 15 | |
| α-helix | 1393-1396 | 4 | |
| β-strand | 1401 | 1 | 18 |
| α-helix | 1404-1406 | 3 | |
| α-helix | 1408-1410 | 3 | |
| α-helix | 1418-1452 | 35 | |
| α-helix | 1458-1473 | 16 | |
| α-helix | 1478-1479 | 2 | |
| α-helix | 1481-1488 | 8 | |
| α-helix | 1489-1493 | 5 | |
| α-helix | 1496-1518 | 23 | |
| α-helix | 1523-1526 | 4 | |
| β-strand | 1536-1540 | 5 | 27 |
| α-helix | 1546-1554 | 9 | |
| β-strand | 1563 | 1 | 27 |
| β-strand | 1574 | 1 | 28 |
| β-strand | 1578-1582 | 5 | 27 |
| α-helix | 1586-1587 | 2 | |
| α-helix | 1593-1604 | 12 | |
| α-helix | 1608-1620 | 13 | |
| α-helix | 1630-1644 | 15 | |
| α-helix | 1654-1662 | 9 | |
| α-helix | 1668-1683 | 16 | |
| α-helix | 1690-1707 | 18 | |
| α-helix | 1716-1726 | 11 | |
| α-helix | 1727-1729 | 3 | |
| α-helix | 1733-1735 | 3 | |
| α-helix | 1739-1744 | 6 | |
| α-helix | 1758-1773 | 16 | |
| α-helix | 1784-1787 | 4 | |
| α-helix | 1795-1811 | 17 | |
| β-strand | 1817 | 1 | 28 |
| α-helix | 1820-1827 | 8 | |
| α-helix | 1843-1858 | 16 | |
| α-helix | 1859-1863 | 5 | |
| α-helix | 1868-1871 | 4 | |
| α-helix | 1875-1890 | 16 | |
| α-helix | 1900-1902 | 3 | |
| α-helix | 1903-1907 | 5 | |
| α-helix | 1908-1915 | 8 | |
| α-helix | 1918-1924 | 7 | |
| α-helix | 1928-1934 | 7 | |
| α-helix | 1935-1937 | 3 | |
| α-helix | 1942-1952 | 11 | |
| α-helix | 1961-1977 | 17 | |
| α-helix | 1984-1998 | 15 | |
| α-helix | 2005-2019 | 15 | |
| α-helix | 2024-2035 | 12 | |
| α-helix | 2036-2038 | 3 | |
| α-helix | 2045-2054 | 10 | |
| α-helix | 2056-2070 | 15 | |
| α-helix | 2078-2079 | 2 | |
| α-helix | 2081-2093 | 13 | |
| α-helix | 2098-2113 | 16 | |
| α-helix | 2118-2121 | 4 | |
| α-helix | 2122-2124 | 3 | |
| α-helix | 2127-2131 | 5 | |
| β-strand | 2142 | 1 | 29 |
Chain A: 9 helices, 14 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 29-34 | 6 | |
| β-strand | 42-46 | 5 | 34 |
| β-strand | 47 | 1 | 35 |
| β-strand | 51-56 | 6 | 34 |
| β-strand | 64 | 1 | 36 |
| α-helix | 66-68 | 3 | |
| β-strand | 72-74 | 3 | 37 |
| β-strand | 80-82 | 3 | 37 |
| α-helix | 87-108 | 22 | |
| α-helix | 111-113 | 3 | |
| α-helix | 114-130 | 17 | |
| β-strand | 131 | 1 | 38 |
| α-helix | 135-137 | 3 | |
| β-strand | 142-146 | 5 | 37 |
| β-strand | 152-156 | 5 | 37 |
| β-strand | 164-166 | 3 | 37 |
| β-strand | 168-171 | 4 | 34 |
| α-helix | 175-189 | 15 | |
| β-strand | 194 | 1 | 35 |
| α-helix | 199-214 | 16 | |
| β-strand | 223-228 | 6 | 34 |
| β-strand | 233-235 | 3 | 34 |
| α-helix | 238-249 | 12 | |
Chain B: 11 helices, 14 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 20-29 | 10 | |
| β-strand | 35-39 | 5 | 39 |
| β-strand | 42-48 | 7 | 39 |
| β-strand | 56 | 1 | 37 |
| β-strand | 65-68 | 4 | 40 |
| β-strand | 71-77 | 7 | 40 |
| α-helix | 79-92 | 14 | |
| α-helix | 93-97 | 5 | |
| α-helix | 104-106 | 3 | |
| α-helix | 107-123 | 17 | |
| β-strand | 127 | 1 | 38 |
| α-helix | 128-130 | 3 | |
| β-strand | 132-140 | 9 | 40 |
| β-strand | 144-150 | 7 | 40 |
| β-strand | 156-158 | 3 | 40 |
| β-strand | 159 | 1 | 41 |
| β-strand | 161-163 | 3 | 39 |
| α-helix | 168-178 | 11 | |
| α-helix | 185-198 | 14 | |
| β-strand | 209-214 | 6 | 39 |
| α-helix | 219-221 | 3 | |
| β-strand | 224-225 | 2 | 42 |
| β-strand | 235-237 | 3 | 39 |
| α-helix | 238-239 | 2 | |
| α-helix | 240-247 | 8 | |
Chain C: 8 helices, 12 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 20-30 | 11 | |
| β-strand | 35-39 | 5 | 43 |
| β-strand | 43-49 | 7 | 43 |
| β-strand | 57 | 1 | 41 |
| β-strand | 66-68 | 3 | 44 |
| β-strand | 73-79 | 7 | 44 |
| α-helix | 81-102 | 22 | |
| α-helix | 105-107 | 3 | |
| α-helix | 108-122 | 15 | |
| β-strand | 133-141 | 9 | 44 |
| β-strand | 145-151 | 7 | 44 |
| β-strand | 157-159 | 3 | 44 |
| β-strand | 160 | 1 | 45 |
| β-strand | 162-165 | 4 | 43 |
| α-helix | 169-178 | 10 | |
| α-helix | 186-198 | 13 | |
| α-helix | 208-210 | 3 | |
| β-strand | 211-217 | 7 | 43 |
| β-strand | 228-229 | 2 | 43 |
| α-helix | 232-242 | 11 | |
Chain D: 9 helices, 11 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 20-28 | 9 | |
| α-helix | 31-32 | 2 | |
| β-strand | 33-37 | 5 | 46 |
| β-strand | 42-44 | 3 | 46 |
| β-strand | 55 | 1 | 45 |
| β-strand | 64-68 | 5 | 47 |
| β-strand | 71-77 | 7 | 47 |
| α-helix | 79-100 | 22 | |
| α-helix | 103-105 | 3 | |
| α-helix | 106-121 | 16 | |
| β-strand | 131-138 | 8 | 47 |
| β-strand | 145-150 | 6 | 47 |
| α-helix | 152-154 | 3 | |
| β-strand | 156-158 | 3 | 47 |
| β-strand | 161-164 | 4 | 46 |
| α-helix | 169-178 | 10 | |
| α-helix | 188-192 | 5 | |
| β-strand | 213-216 | 4 | 46 |
| β-strand | 220-223 | 4 | 46 |
| α-helix | 226-246 | 21 | |
Chain E: 10 helices, 11 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 22-28 | 7 | |
| α-helix | 30-32 | 3 | |
| β-strand | 37-41 | 5 | 48 |
| β-strand | 46-51 | 6 | 48 |
| α-helix | 52-53 | 2 | |
| α-helix | 61-63 | 3 | |
| β-strand | 67-71 | 5 | 49 |
| β-strand | 74-78 | 5 | 49 |
| α-helix | 87-103 | 17 | |
| α-helix | 106-108 | 3 | |
| α-helix | 109-122 | 14 | |
| β-strand | 142-148 | 7 | 49 |
| β-strand | 152-159 | 8 | 49 |
| β-strand | 163-166 | 4 | 49 |
| β-strand | 167 | 1 | 50 |
| β-strand | 170-172 | 3 | 48 |
| α-helix | 176-186 | 11 | |
| α-helix | 193-208 | 16 | |
| β-strand | 217-223 | 7 | 48 |
| β-strand | 227-230 | 4 | 48 |
| α-helix | 233-248 | 16 | |
21 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| Proteasome subunit beta type-6 | 1, M | protein | 222 | Saccharomyces cerevisiae | P23724 (AlphaFold model) |
| Proteasome subunit beta type-7 | 2, N | protein | 233 | Saccharomyces cerevisiae | P30657 (AlphaFold model) |
| Proteasome activator BLM10 | 3 | protein | 2143 | Saccharomyces cerevisiae | P43583 (AlphaFold model) |
| Proteasome subunit alpha type-1 | A, O | protein | 252 | Saccharomyces cerevisiae | P21243 (AlphaFold model) |
| Proteasome subunit alpha type-2 | B, P | protein | 250 | Saccharomyces cerevisiae | P23639 |
| Proteasome subunit alpha type-3 | C, Q | protein | 258 | Saccharomyces cerevisiae | P23638 |
| Proteasome subunit alpha type-4 | D, R | protein | 254 | Saccharomyces cerevisiae | P40303 |
| Proteasome subunit alpha type-5 | E, S | protein | 260 | Saccharomyces cerevisiae | P32379 |
| Proteasome subunit alpha type-6 | F, T | protein | 234 | Saccharomyces cerevisiae | P40302 |
| Probable proteasome subunit alpha type-7 | G, U | protein | 288 | Saccharomyces cerevisiae | P21242 |
| Proteasome subunit beta type-1 | H, V | protein | 196 | Saccharomyces cerevisiae | P38624 |
| Proteasome subunit beta type-2 | I, W | protein | 232 | Saccharomyces cerevisiae | P25043 |
3 more molecules are not listed.
Sequence of entity 1 (1, M), FASTA
>9GBK_1 Proteasome subunit beta type-6 (chains 1, M)
QFNPYGDNGGTILGIAGEDFAVLAGDTRNITDYSINSRYEPKVFDCGDNIVMSANGFAAD
GDALVKRFKNSVKWYHFDHNDKKLSINSAARNIQHLLYGKRFFPYYVHTIIAGLDEDGKG
AVYSFDPVGSYEREQCRAGGAAASLIMPFLDNQVNFKNQYEPGTNGKVKKPLKYLSVEEV
IKLVRDSFTSATERHIQVGDGLEILIVTKDGVRKEFYELKRD
Sequence of entity 2 (2, N), FASTA
>9GBK_2 Proteasome subunit beta type-7 (chains 2, N)
TQQPIVTGTSVISMKYDNGVIIAADNLGSYGSLLRFNGVERLIPVGDNTVVGISGDISDM
QHIERLLKDLVTENAYDNPLADAEEALEPSYIFEYLATVMYQRRSKMNPLWNAIIVAGVQ
SNGDQFLRYVNLLGVTYSSPTLATGFGAHMANPLLRKVVDRESDIPKTTVQVAEEAIVNA
MRVLYYRDARSSRNFSLAIIDKNTGLTFKKNLQVENMKWDFAKDIKGYGTQKI
Sequence of entity 3 (3), FASTA
>9GBK_3 Proteasome activator BLM10 (chains 3)
MTANNDDDIKSPIPITNKTLSQLKRFERSPGRPSSSQGEIKRKKSRLYAADGRPHSPLRA
RSATPTLQDQKLFNGMDSTSLLNERLQHYTLDYVSDRAQHMKNIYDPSSRWFSRSVRPEF
PIEEFLPYKTESHEDQAKYLCHVLVNLYIAISSLDIQGLISISSKDLADLKKEVDDLALK
TDLFRLSNNTAENDLLGNDIADYDDAEGLEDELDEYFDLAGPDFNATGKITAKSATIVNV
NHWTNELKNCLHFDFPVALRKSLATVYYYLSLVQGQKVYRQMHVDMFERLVSLDDDRTNF
TELLQKQGLLLDHQIMLNFLCEFLPYPDPDYARYELSSKEDLQLFRLLLKHAHNAKPFFD
KSKESLLVDTMNFLLSSLAPSTMMAVMPIVTSVVPYHYHIHSKIIDYFPFCYSIWSSVSA
NVAIDTHMYDFVGSISKDVHNKILSSEHEKDVVGVEFGEFGIFTDDQMTFMFNRLQGHLR
TDGQIHSYSRTVKPFVYAINGSKKDRFFEKLVSLAKAIETFIHPSNNGFWTKPNAKFVHA
FIKSYHGRVKYEEDICARGVTNGICLTSFCHEEIVEIFLNIISLGSQNKNPDIANYYISC
FAYLLELDPSNAYLIYDKILIDLYDTLADQFINSRHRIISSLKQFTRVIRFIVMDKLYRV
HITNVLSMLVSKLDMNDTNLTSNLINGIVSIAAFIPIQDLTGEDDYISFESDTLPLVQQH
FYHIKCGESSKTFRVDDELLNNAFKASTTVFQSMLKVYVEKIFQLVDVDLEDSLVTKINQ
TTMILQESMDDKIFNYFASLLQRNFWSNDSFKEKDPNYELVTIPLAALVRRNNGLSKELV
RTLLFHIKEQIKRGAGSVRSTSEIQQRDVKLVLYLTALNDVLRQCHESLLEYSDELITFM
KYLYDNVTNPPLDVITSIVIHSALATLCTTEITDCRLFPEDSKIPEKDRWGGLQFDPRRF
DKQHLSFQWHVPSSDEITLSISILESLSEYCINNVEELMKAPRHDSEYGDMIQKYVLVMT
HTLSGSSLLFDPDFNKYRTQSNLSYREKLILLKNIRENNCDPQELDIDIEQIRSGKDDED
YIESKDIEAGLNAGVSDVVQLRDEFPDELIVDEEVVSEMPSGVNTPIAGTHGTDNSAMSS
DLAFRDLDIYTCNYYFGNTTEEKLQNPQYLQVHRVRARIGHFFHKLYVFLSTNFENNTNM
FQILLHGLKVWFTDLGQETVFNEDPNAFIDVDFLENVQSLSHVNEPFTRTNFAIRANSLH
QSRVLLHSTNRKASKLENLLLVDIIQLATSLYPDIYKPAQGTLVHCMKQLVGSYGVVINK
IIPSLEKAIKDHDYMKIQVILNVLLIKKIHRKLMTDYKDIGRLIFLLIECCRVNELEIGM
YADKILTDIVIGIKIPSSVCVISDQAFLPLAPPDGTINLQVEAVKLAKKKKREYYLSLLV
DLQDKLLDKLDNEKDMGWKIRMFILRFVTQIQSNLESKPDKRAVFSIISQISTKHPEIIH
LVVKSLLSTCNKIISLSDYEYDITRAYKNEFNPSFVEILDTSTTSFPKTFTEEMNNFDNP
KYFIDLRAYVGWLCWGRLMYVMSPKALKLNLRENELEVLKTAGHLLTREFLRDVTMNLVQ
DNETRGVFSSGNVSFFSLVILLISSGFCELNMSDLFELCESYYNKDDKASMIMSVEIVAG
LVCGSKFMSVSDLDKRDTFIENFLAKCLDYELNHDAFEIWSTLAWWLPAVVDLRRSKTFF
CHFINADGMFDRESDAATHQTSKIYMLRSILMSMEFRAPDVGKLFDELVFDHPYDQVRQA
VAKLLTTLVQNQSNPSISDPTTLLEAERNDPDGLGLPLKSVPEKVDAYIKKQFEIIKNLE
DSVVGLNPQQFIKTDYFYRTSTIFYWIKEMARGPNKVLLVPYLVDYVLPFLIGLVKHKDV
CALASLDPVRLYAGLGYMPIRKNHVAAIVDYVCSSNVALSSNQTKLQLAFIQHFLSAELL
QLTEEEKNKILEFVVSNLYNEQFVEVRVRAASILSDIVHNWKEEQPLLSLIERFAKGLDV
NKYTSKERQKLSKTDIKIHGNVLGLGAIISAFPYVFPLPPWIPKQLSNLSSWARTSGMTG
QAAKNTISEFKKVRADTWKFDRASFNTEELEDLEGVLWRSYYA
Sequence of entity 4 (A, O), FASTA
>9GBK_4 Proteasome subunit alpha type-1 (chains A, O)
MSGAAAASAAGYDRHITIFSPEGRLYQVEYAFKATNQTNINSLAVRGKDCTVVISQKKVP
DKLLDPTTVSYIFCISRTIGMVVNGPIPDARNAALRAKAEAAEFRYKYGYDMPCDVLAKR
MANLSQIYTQRAYMRPLGVILTFVSVDEELGPSIYKTDPAGYYVGYKATATGPKQQEITT
NLENHFKKSKIDHINEESWEKVVEFAITHMIDALGTEFSKNDLEVGVATKDKFFTLSAEN
IEERLVAIAEQD
Sequence of entity 5 (B, P), FASTA
>9GBK_5 Proteasome subunit alpha type-2 (chains B, P)
MTDRYSFSLTTFSPSGKLGQIDYALTAVKQGVTSLGIKATNGVVIATEKKSSSPLAMSET
LSKVSLLTPDIGAVYSGMGPDYRVLVDKSRKVAHTSYKRIYGEYPPTKLLVSEVAKIMQE
ATQSGGVRPFGVSLLIAGHDEFNGFSLYQVDPSGSYFPWKATAIGKGSVAAKTFLEKRWN
DELELEDAIHIALLTLKESVEGEFNGDTIELAIIGDENPDLLGYTGIPTDKGPRFRKLTS
QEINDRLEAL
Sequence of entity 6 (C, Q), FASTA
>9GBK_6 Proteasome subunit alpha type-3 (chains C, Q)
MGSRRYDSRTTIFSPEGRLYQVEYALESISHAGTAIGIMASDGIVLAAERKVTSTLLEQD
TSTEKLYKLNDKIAVAVAGLTADAEILINTARIHAQNYLKTYNEDIPVEILVRRLSDIKQ
GYTQHGGLRPFGVSFIYAGYDDRYGYQLYTSNPSGNYTGWKAISVGANTSAAQTLLQMDY
KDDMKVDDAIELALKTLSKTTDSSALTYDRLEFATIRKGANDGEVYQKIFKPQEIKDILV
KTGITKKDEDEEADEDMK
Sequence of entity 7 (D, R), FASTA
>9GBK_7 Proteasome subunit alpha type-4 (chains D, R)
MSGYDRALSIFSPDGHIFQVEYALEAVKRGTCAVGVKGKNCVVLGCERRSTLKLQDTRIT
PSKVSKIDSHVVLSFSGLNADSRILIEKARVEAQSHRLTLEDPVTVEYLTRYVAGVQQRY
TQSGGVRPFGVSTLIAGFDPRDDEPKLYQTEPSGIYSSWSAQTIGRNSKTVREFLEKNYD
RKEPPATVEECVKLTVRSLLEVVQTGAKNIEITVVKPDSDIVALSSEEINQYVTQIEQEK
QEQQEQDKKKKSNH
Sequence of entity 8 (E, S), FASTA
>9GBK_8 Proteasome subunit alpha type-5 (chains E, S)
MFLTRSEYDRGVSTFSPEGRLFQVEYSLEAIKLGSTAIGIATKEGVVLGVEKRATSPLLE
SDSIEKIVEIDRHIGCAMSGLTADARSMIEHARTAAVTHNLYYDEDINVESLTQSVCDLA
LRFGEGASGEERLMSRPFGVALLIAGHDADDGYQLFHAEPSGTFYRYNAKAIGSGSEGAQ
AELLNEWHSSLTLKEAELLVLKILKQVMEEKLDENNAQLSCITKQDGFKIYDNEKTAELI
KELKEKEAAESPEEADVEMS
Sequence of entity 9 (F, T), FASTA
>9GBK_9 Proteasome subunit alpha type-6 (chains F, T)
MFRNNYDGDTVTFSPTGRLFQVEYALEAIKQGSVTVGLRSNTHAVLVALKRNADELSSYQ
KKIIKCDEHMGLSLAGLAPDARVLSNYLRQQCNYSSLVFNRKLAVERAGHLLCDKAQKNT
QSYGGRPYGVGLLIIGYDKSGAHLLEFQPSGNVTELYGTAIGARSQGAKTYLERTLDTFI
KIDGNPDELIKAGVEAISQSLRDESLTVDNLSIAIVGKDTPFTIYDGEAVAKYI
Sequence of entity 10 (G, U), FASTA
>9GBK_10 Probable proteasome subunit alpha type-7 (chains G, U)
MTSIGTGYDLSNSVFSPDGRNFQVEYAVKAVENGTTSIGIKCNDGVVFAVEKLITSKLLV
PQKNVKIQVVDRHIGCVYSGLIPDGRHLVNRGREEAASFKKLYKTPIPIPAFADRLGQYV
QAHTLYNSVRPFGVSTIFGGVDKNGAHLYMLEPSGSYWGYKGAATGKGRQSAKAELEKLV
DHHPEGLSAREAVKQAAKIIYLAHEDNKEKDFELEISWCSLSETNGLHKFVKGDLLQEAI
DFAQKEINGDDDEDEDDSDNVMSSDDENAPVATNANATTDQEGDIHLE
Sequence of entity 11 (H, V), FASTA
>9GBK_11 Proteasome subunit beta type-1 (chains H, V)
TSIMAVTFKDGVILGADSRTTTGAYIANRVTDKLTRVHDKIWCCRSGSAADTQAIADIVQ
YHLELYTSQYGTPSTETAASVFKELCYENKDNLTAGIIVAGYDDKNKGEVYTIPLGGSVH
KLPYAIAGSGSTFIYGYCDKNFRENMSKEETVDFIKHSLSQAIKWDGSSGGVIRMVVLTA
AGVERLIFYPDEYEQL
Sequence of entity 12 (I, W), FASTA
>9GBK_12 Proteasome subunit beta type-2 (chains I, W)
TTIVGVKFNNGVVIAADTRSTQGPIVADKNCAKLHRISPKIWCAGAGTAADTEAVTQLIG
SNIELHSLYTSREPRVVSALQMLKQHLFKYQGHIGAYLIVAGVDPTGSHLFSIHAHGSTD
VGYYLSLGSGSLAAMAVLESHWKQDLTKEEAIKLASDAIQAGIWNDLGSGSNVDVCVMEI
GKDAEYLRNYLTPNVREEKQKSYKFPRGTTAVLKESIVNICDIQEEQVDITA
Primary citation
Structural roles of Ump1 and beta-subunit propeptides in proteasome biogenesis. Mark, E., Ramos, P.C., Kayser, F. et al. Life Sci Alliance (2024) 7. DOI 10.26508/lsa.202402865 · PubMed
Other PDB entries of the same protein (UniProt P23724 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 1RYP 1.9 Å, Crystal structure of the 20S proteasome from yeast at 2.4 Å resolution
- 8RVQ 2.02 Å, 20S proteasome from pre1-1
- 4R17 2.1 Å, Ligand-induced aziridine-formation at subunit beta5 of the yeast 20S proteasome
- 8RVL 2.14 Å, Proteasomal late precursor complex from pre1-1
- 8U7U 2.16 Å, Proteasome 20S Core Particle from Beta 3 D205 deletion
- 1G65 2.25 Å, Crystal structure of epoxomicin:20s proteasome reveals a molecular basis for selectivity…
- 8RVP 2.28 Å, Proteasomal late precursor complex from pre1-1, state 2
- 4QVP 2.3 Å, yCP beta5-M45T mutant in complex with bortezomib
- 5CZ4 2.3 Å, Yeast 20S proteasome at 2.3 A resolution
- 6HWE 2.3 Å, Yeast 20S proteasome beta2-G45A mutant in complex with carfilzomib
- 1G0U 2.4 Å, A gated channel into the proteasome core particle
- 3NZJ 2.4 Å, Crystal structure of yeast 20S proteasome in complex with ligand 2a
Browse structure collections
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