9GUW: 30S ribosomal protein S1
30S-TEC (TEC in expressome position) Inactive state 2. Determined by electron microscopy at 3.1 Å resolution. Released 20 Nov 2024.
- Method
- Electron microscopy
- Resolution
- 3.1 Å
- Organisms
- Escherichia coli K-12, synthetic construct
- Chains
- 30
- Atoms
- 80,600
- Mol. weight
- 1292.17 kDa
- Ligands
- ZN, MG
- Released
- 20 Nov 2024
Explore 9GUW in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
9GUW contains 269 α-helices and 334 β-strands across 26 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain 1: 6 helices, 20 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 12-17 | 6 | 63 |
| β-strand | 23-31 | 9 | 63 |
| α-helix | 35-50 | 16 | |
| β-strand | 53-59 | 7 | 64 |
| β-strand | 61 | 1 | 64 |
| β-strand | 74 | 1 | 65 |
| α-helix | 78-86 | 9 | |
| β-strand | 90-92 | 3 | 66 |
| β-strand | 97-105 | 9 | 64 |
| β-strand | 108-111 | 4 | 65 |
| α-helix | 112-114 | 3 | |
| β-strand | 115 | 1 | 64 |
| β-strand | 118 | 1 | 66 |
| β-strand | 121-123 | 3 | 66 |
| β-strand | 129-133 | 5 | 65 |
| β-strand | 139-149 | 11 | 64 |
| β-strand | 152-153 | 2 | 67 |
| α-helix | 155-162 | 8 | |
| α-helix | 166-167 | 2 | |
| β-strand | 171-172 | 2 | 64 |
| β-strand | 175-176 | 2 | 67 |
| β-strand | 180-189 | 10 | 63 |
| β-strand | 192 | 1 | 68 |
| β-strand | 195 | 1 | 68 |
| β-strand | 199-207 | 9 | 63 |
| α-helix | 213-232 | 20 | |
Chain 2: 4 helices, 17 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 15 | 1 | 69 |
| β-strand | 23-24 | 2 | 69 |
| β-strand | 27-31 | 5 | 69 |
| α-helix | 35-50 | 16 | |
| β-strand | 52-61 | 10 | 70 |
| β-strand | 74 | 1 | 71 |
| α-helix | 78-86 | 9 | |
| β-strand | 90-92 | 3 | 72 |
| β-strand | 97-105 | 9 | 70 |
| β-strand | 108-111 | 4 | 71 |
| α-helix | 112-114 | 3 | |
| β-strand | 115 | 1 | 70 |
| β-strand | 121-123 | 3 | 72 |
| β-strand | 129-133 | 5 | 71 |
| β-strand | 139-150 | 12 | 70 |
| β-strand | 152-153 | 2 | 73 |
| β-strand | 171-172 | 2 | 70 |
| β-strand | 175-176 | 2 | 73 |
| β-strand | 180-192 | 13 | 69 |
| β-strand | 195-207 | 13 | 69 |
| α-helix | 213-227 | 15 | |
Chain 3: 61 helices, 98 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 13-14 | 2 | 74 |
| α-helix | 29-39 | 11 | |
| α-helix | 49-54 | 6 | |
| β-strand | 59-61 | 3 | 75 |
| β-strand | 66-75 | 10 | 75 |
| α-helix | 76-78 | 3 | |
| α-helix | 82-88 | 7 | |
| β-strand | 93-104 | 12 | 75 |
| β-strand | 115-118 | 4 | 75 |
| β-strand | 122-128 | 7 | 75 |
| β-strand | 130 | 1 | 76 |
| β-strand | 136-137 | 2 | 76 |
| β-strand | 142-145 | 4 | 76 |
| α-helix | 146 | 1 | |
| β-strand | 147-151 | 5 | 77 |
| α-helix | 152 | 1 | |
| β-strand | 154-161 | 8 | 78 |
| β-strand | 170-177 | 8 | 78 |
| β-strand | 180-181 | 2 | 79 |
| β-strand | 184-188 | 5 | 78 |
| β-strand | 194-198 | 5 | 78 |
| β-strand | 204-205 | 2 | 78 |
| α-helix | 207-212 | 6 | |
| α-helix | 217-224 | 8 | |
| β-strand | 227-231 | 5 | 80 |
| β-strand | 238-239 | 2 | 80 |
| α-helix | 243-245 | 3 | |
| β-strand | 251 | 1 | 81 |
| β-strand | 255 | 1 | 82 |
| β-strand | 263 | 1 | 82 |
| β-strand | 267 | 1 | 81 |
| α-helix | 271-280 | 10 | |
| β-strand | 285-286 | 2 | 80 |
| α-helix | 289-293 | 5 | |
| β-strand | 296 | 1 | 83 |
| β-strand | 297 | 1 | 80 |
| β-strand | 301-302 | 2 | 84 |
| β-strand | 309-311 | 3 | 84 |
| α-helix | 315 | 1 | |
| β-strand | 316 | 1 | 83 |
| α-helix | 317 | 1 | |
| α-helix | 319-328 | 10 | |
| β-strand | 332-336 | 5 | 80 |
| α-helix | 346-353 | 8 | |
| α-helix | 359-370 | 12 | |
| α-helix | 378-389 | 12 | |
| α-helix | 392-394 | 3 | |
| β-strand | 395-396 | 2 | 79 |
| α-helix | 399-408 | 10 | |
| α-helix | 422-436 | 15 | |
| α-helix | 442-444 | 3 | |
| β-strand | 451-454 | 4 | 77 |
| α-helix | 456-481 | 26 | |
| α-helix | 489-492 | 4 | |
| α-helix | 496-508 | 13 | |
| β-strand | 512-514 | 3 | 76 |
| α-helix | 515 | 1 | |
| α-helix | 520-527 | 8 | |
| β-strand | 529-531 | 3 | 77 |
| α-helix | 545-548 | 4 | |
| β-strand | 558 | 1 | 85 |
| β-strand | 572-574 | 3 | 77 |
| β-strand | 575 | 1 | 85 |
| β-strand | 580-581 | 2 | 86 |
| β-strand | 587-588 | 2 | 86 |
| β-strand | 589-595 | 7 | 87 |
| β-strand | 598-606 | 9 | 87 |
| α-helix | 610-613 | 4 | |
| β-strand | 616-617 | 2 | 87 |
| β-strand | 623 | 1 | 88 |
| β-strand | 629 | 1 | 88 |
| β-strand | 633-637 | 5 | 87 |
| β-strand | 642-646 | 5 | 87 |
| β-strand | 652-654 | 3 | 87 |
| α-helix | 657-660 | 4 | |
| α-helix | 663-666 | 4 | |
| α-helix | 671-673 | 3 | |
| α-helix | 676-686 | 11 | |
| β-strand | 689 | 1 | 89 |
| α-helix | 690-691 | 2 | |
| β-strand | 700-701 | 2 | 74 |
| α-helix | 705-711 | 7 | |
| β-strand | 716-717 | 2 | 90 |
| β-strand | 722-727 | 6 | 91 |
| β-strand | 731 | 1 | 92 |
| β-strand | 732-736 | 5 | 91 |
| α-helix | 738-740 | 3 | |
| β-strand | 749 | 1 | 91 |
| β-strand | 752 | 1 | 92 |
| β-strand | 758 | 1 | 93 |
| β-strand | 763 | 1 | 94 |
| β-strand | 764 | 1 | 93 |
| β-strand | 768-769 | 2 | 90 |
| β-strand | 776-777 | 2 | 91 |
| β-strand | 782-785 | 4 | 90 |
| β-strand | 789-790 | 2 | 95 |
| β-strand | 793-794 | 2 | 95 |
| β-strand | 798-804 | 7 | 96 |
| β-strand | 816-819 | 4 | 96 |
| α-helix | 820-824 | 5 | |
| β-strand | 830-841 | 12 | 94 |
| β-strand | 842-843 | 2 | 97 |
| β-strand | 846-847 | 2 | 97 |
| β-strand | 849-850 | 2 | 98 |
| α-helix | 859-862 | 4 | |
| β-strand | 865 | 1 | 99 |
| β-strand | 870 | 1 | 100 |
| β-strand | 871 | 1 | 99 |
| α-helix | 872 | 1 | |
| β-strand | 876-878 | 3 | 94 |
| β-strand | 882-884 | 3 | 100 |
| β-strand | 886-887 | 2 | 98 |
| β-strand | 888 | 1 | 101 |
| β-strand | 914 | 1 | 101 |
| β-strand | 918-919 | 2 | 100 |
| α-helix | 920-921 | 2 | |
| β-strand | 925-935 | 11 | 94 |
| α-helix | 940-942 | 3 | |
| α-helix | 943-978 | 36 | |
| α-helix | 986-991 | 6 | |
| α-helix | 1006-1037 | 32 | |
| β-strand | 1046-1058 | 13 | 94 |
| β-strand | 1065-1067 | 3 | 102 |
| β-strand | 1073-1075 | 3 | 102 |
| β-strand | 1076-1080 | 5 | 96 |
| β-strand | 1087-1088 | 2 | 103 |
| α-helix | 1092 | 1 | |
| β-strand | 1093 | 1 | 103 |
| α-helix | 1094 | 1 | |
| β-strand | 1096-1098 | 3 | 96 |
| α-helix | 1102-1106 | 5 | |
| α-helix | 1110-1133 | 24 | |
| α-helix | 1138-1150 | 13 | |
| α-helix | 1161-1164 | 4 | |
| α-helix | 1167-1174 | 8 | |
| β-strand | 1182-1183 | 2 | 74 |
| α-helix | 1192-1201 | 10 | |
| β-strand | 1209-1210 | 2 | 104 |
| β-strand | 1212-1213 | 2 | 103 |
| α-helix | 1219 | 1 | |
| β-strand | 1220 | 1 | 103 |
| α-helix | 1221 | 1 | |
| β-strand | 1225-1226 | 2 | 104 |
| β-strand | 1227-1232 | 6 | 96 |
| β-strand | 1233-1234 | 2 | 102 |
| β-strand | 1235 | 1 | 89 |
| α-helix | 1239-1241 | 3 | |
| β-strand | 1244-1246 | 3 | 8 |
| β-strand | 1251 | 1 | 105 |
| α-helix | 1257 | 1 | |
| β-strand | 1258 | 1 | 105 |
| α-helix | 1259 | 1 | |
| β-strand | 1269-1270 | 2 | 106 |
| α-helix | 1272-1280 | 9 | |
| α-helix | 1285-1288 | 4 | |
| α-helix | 1289-1293 | 5 | |
| α-helix | 1298-1310 | 13 | |
| α-helix | 1321-1331 | 11 | |
| β-strand | 1335-1340 | 6 | 1 |
Chain 4: 79 helices, 80 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 19-24 | 6 | 1 |
| α-helix | 27-33 | 7 | |
| β-strand | 34-37 | 4 | 2 |
| β-strand | 44 | 1 | 3 |
| α-helix | 50 | 1 | |
| β-strand | 51 | 1 | 3 |
| α-helix | 52 | 1 | |
| α-helix | 59-62 | 4 | |
| α-helix | 78-80 | 3 | |
| β-strand | 84 | 1 | 4 |
| α-helix | 90 | 1 | |
| β-strand | 91 | 1 | 4 |
| α-helix | 92 | 1 | |
| α-helix | 95-99 | 5 | |
| β-strand | 102-112 | 11 | 2 |
| α-helix | 114-117 | 4 | |
| α-helix | 123-128 | 6 | |
| α-helix | 132-139 | 8 | |
| β-strand | 144-147 | 4 | 5 |
| β-strand | 159-160 | 2 | 5 |
| α-helix | 162-171 | 10 | |
| β-strand | 177-179 | 3 | 5 |
| α-helix | 182-190 | 9 | |
| α-helix | 194-204 | 11 | |
| α-helix | 205-207 | 3 | |
| α-helix | 211-229 | 19 | |
| α-helix | 234-237 | 4 | |
| β-strand | 238-244 | 7 | 2 |
| α-helix | 245-246 | 2 | |
| α-helix | 247-249 | 3 | |
| β-strand | 254 | 1 | 6 |
| β-strand | 260 | 1 | 6 |
| α-helix | 264-285 | 22 | |
| α-helix | 289-308 | 20 | |
| β-strand | 317 | 1 | 7 |
| β-strand | 323 | 1 | 7 |
| α-helix | 324-325 | 2 | |
| α-helix | 327-331 | 5 | |
| α-helix | 337 | 1 | |
| α-helix | 338-342 | 5 | |
| β-strand | 345-346 | 2 | 106 |
| β-strand | 350-354 | 5 | 8 |
| β-strand | 355-357 | 3 | 9 |
| β-strand | 365-369 | 5 | 9 |
| α-helix | 370-376 | 7 | |
| α-helix | 378-385 | 8 | |
| α-helix | 394-402 | 9 | |
| α-helix | 406-415 | 10 | |
| α-helix | 416-418 | 3 | |
| β-strand | 421-424 | 4 | 8 |
| α-helix | 425 | 1 | |
| α-helix | 431-433 | 3 | |
| β-strand | 434-437 | 4 | 8 |
| β-strand | 438-442 | 5 | 9 |
| β-strand | 447-449 | 3 | 9 |
| α-helix | 451-457 | 7 | |
| β-strand | 465-469 | 5 | 8 |
| α-helix | 474-479 | 6 | |
| α-helix | 480-484 | 5 | |
| β-strand | 485 | 1 | 8 |
| α-helix | 486-488 | 3 | |
| β-strand | 491 | 1 | 10 |
| β-strand | 498 | 1 | 10 |
| α-helix | 504-514 | 11 | |
| β-strand | 526-527 | 2 | 11 |
| α-helix | 530-539 | 10 | |
| β-strand | 547-557 | 11 | 11 |
| β-strand | 563-573 | 11 | 11 |
| α-helix | 574-579 | 6 | |
| α-helix | 589-591 | 3 | |
| α-helix | 600-611 | 12 | |
| α-helix | 614-635 | 22 | |
| α-helix | 641-643 | 3 | |
| α-helix | 650-670 | 21 | |
| α-helix | 675-703 | 29 | |
| β-strand | 706-708 | 3 | 12 |
| β-strand | 713-715 | 3 | 12 |
| α-helix | 721-727 | 7 | |
| α-helix | 734-741 | 8 | |
| β-strand | 745 | 1 | 13 |
| β-strand | 748 | 1 | 14 |
| α-helix | 753 | 1 | |
| β-strand | 754 | 1 | 14 |
| α-helix | 755 | 1 | |
| β-strand | 759 | 1 | 13 |
| α-helix | 766-767 | 2 | |
| α-helix | 769-804 | 36 | |
| β-strand | 809-811 | 3 | 15 |
| β-strand | 820-822 | 3 | 16 |
| β-strand | 825-826 | 2 | 17 |
| β-strand | 829-830 | 2 | 18 |
| β-strand | 831-833 | 3 | 17 |
| α-helix | 835-839 | 5 | |
| α-helix | 842 | 1 | |
| β-strand | 843 | 1 | 19 |
| β-strand | 844 | 1 | 16 |
| α-helix | 847 | 1 | |
| β-strand | 848-849 | 2 | 20 |
| α-helix | 850 | 1 | |
| β-strand | 856-858 | 3 | 20 |
| β-strand | 863 | 1 | 19 |
| α-helix | 866-874 | 9 | |
| β-strand | 880-882 | 3 | 16 |
| β-strand | 894-895 | 2 | 15 |
| α-helix | 896-899 | 4 | |
| β-strand | 901 | 1 | 21 |
| β-strand | 908 | 1 | 21 |
| α-helix | 909-910 | 2 | |
| α-helix | 915-924 | 10 | |
| α-helix | 925-928 | 4 | |
| β-strand | 956-961 | 6 | 18 |
| β-strand | 965-967 | 3 | 22 |
| β-strand | 973-975 | 3 | 22 |
| β-strand | 981-985 | 5 | 18 |
| β-strand | 991-996 | 6 | 18 |
| β-strand | 1002-1003 | 2 | 22 |
| β-strand | 1010-1011 | 2 | 18 |
| β-strand | 1018-1019 | 2 | 22 |
| β-strand | 1024-1028 | 5 | 23 |
| β-strand | 1033-1035 | 3 | 24 |
| β-strand | 1038 | 1 | 25 |
| β-strand | 1042 | 1 | 23 |
| β-strand | 1046-1047 | 2 | 23 |
| α-helix | 1058 | 1 | |
| β-strand | 1059-1061 | 3 | 23 |
| α-helix | 1062-1063 | 2 | |
| α-helix | 1069-1072 | 4 | |
| β-strand | 1077 | 1 | 25 |
| β-strand | 1080-1081 | 2 | 24 |
| α-helix | 1087-1090 | 4 | |
| β-strand | 1100 | 1 | 25 |
| β-strand | 1106-1107 | 2 | 23 |
| α-helix | 1113 | 1 | |
| β-strand | 1114-1115 | 2 | 24 |
| α-helix | 1116 | 1 | |
| β-strand | 1120-1125 | 6 | 23 |
| α-helix | 1138-1146 | 9 | |
| α-helix | 1148-1150 | 3 | |
| α-helix | 1155 | 1 | |
| β-strand | 1156 | 1 | 26 |
| α-helix | 1157 | 1 | |
| β-strand | 1160-1165 | 6 | 27 |
| β-strand | 1173-1178 | 6 | 27 |
| β-strand | 1186-1190 | 5 | 27 |
| β-strand | 1203-1205 | 3 | 27 |
| β-strand | 1209 | 1 | 26 |
| α-helix | 1217-1224 | 8 | |
| α-helix | 1226-1244 | 19 | |
| α-helix | 1251-1260 | 10 | |
| β-strand | 1263-1268 | 6 | 28 |
| β-strand | 1279-1281 | 3 | 28 |
| α-helix | 1282-1295 | 14 | |
| β-strand | 1301-1305 | 5 | 28 |
| α-helix | 1309-1312 | 4 | |
| α-helix | 1319-1323 | 5 | |
| α-helix | 1328-1337 | 10 | |
| β-strand | 1341-1342 | 2 | 1 |
| α-helix | 1347-1352 | 6 | |
| α-helix | 1360-1371 | 12 | |
Chain 5: 5 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 7-12 | 6 | |
| α-helix | 16-31 | 16 | |
| α-helix | 35-37 | 3 | |
| α-helix | 46-55 | 10 | |
| α-helix | 61-89 | 29 | |
Chain B: 5 helices, 12 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 5-15 | 11 | |
| β-strand | 23-31 | 9 | 29 |
| β-strand | 35-39 | 5 | 29 |
| β-strand | 46-49 | 4 | 29 |
| α-helix | 50-53 | 4 | |
| β-strand | 54 | 1 | 30 |
| β-strand | 60 | 1 | 30 |
| β-strand | 67-72 | 6 | 29 |
| α-helix | 81-83 | 3 | |
| β-strand | 84-85 | 2 | 29 |
| α-helix | 86-104 | 19 | |
| β-strand | 107-115 | 9 | 31 |
| β-strand | 119-124 | 6 | 31 |
| β-strand | 127-132 | 6 | 31 |
| α-helix | 133-135 | 3 | |
| β-strand | 151-160 | 10 | 31 |
| β-strand | 165-169 | 5 | 31 |
Chain C: 10 helices, 8 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 6-12 | 7 | |
| β-strand | 16-19 | 4 | 32 |
| α-helix | 25-27 | 3 | |
| β-strand | 31-35 | 5 | 32 |
| β-strand | 38-41 | 4 | 32 |
| α-helix | 43-62 | 20 | |
| β-strand | 67-70 | 4 | 33 |
| α-helix | 77-85 | 9 | |
| β-strand | 90-92 | 3 | 33 |
| α-helix | 96-97 | 2 | |
| α-helix | 104-123 | 20 | |
| α-helix | 126-128 | 3 | |
| α-helix | 131-148 | 18 | |
| β-strand | 160-164 | 5 | 33 |
| α-helix | 170-179 | 10 | |
| β-strand | 183-187 | 5 | 33 |
| β-strand | 198-201 | 4 | 33 |
| α-helix | 207-226 | 20 | |
Chain D: 10 helices, 10 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 7-11 | 5 | |
| β-strand | 12 | 1 | 34 |
| β-strand | 16 | 1 | 34 |
| β-strand | 20 | 1 | 35 |
| α-helix | 29-46 | 18 | |
| α-helix | 48-50 | 3 | |
| β-strand | 52-58 | 7 | 35 |
| β-strand | 64-70 | 7 | 35 |
| α-helix | 73-77 | 5 | |
| α-helix | 79-81 | 3 | |
| α-helix | 82-95 | 14 | |
| β-strand | 99-105 | 7 | 35 |
| α-helix | 109-111 | 3 | |
| α-helix | 113-125 | 13 | |
| α-helix | 130-144 | 15 | |
| β-strand | 148-154 | 7 | 36 |
| α-helix | 157-159 | 3 | |
| β-strand | 165-171 | 7 | 36 |
| β-strand | 180-191 | 12 | 36 |
| β-strand | 194-206 | 13 | 36 |
18 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| 16S ribosomal RNA | A | RNA | 1541 | Escherichia coli K-12 | |
| 30S ribosomal protein S1 | B | protein | 557 | Escherichia coli K-12 | P0AG67 (AlphaFold model) |
| 30S ribosomal protein S2 | C | protein | 241 | Escherichia coli K-12 | P0A7V0 (AlphaFold model) |
| Small ribosomal subunit protein uS3 | D | protein | 233 | Escherichia coli K-12 | P0A7V3 (AlphaFold model) |
| Small ribosomal subunit protein uS4 | E | protein | 206 | Escherichia coli K-12 | P0A7V8 (AlphaFold model) |
| 30S ribosomal protein S5 | F | protein | 157 | Escherichia coli K-12 | P0A7W1 |
| Small ribosomal subunit protein bS6 | G | protein | 131 | Escherichia coli K-12 | P02358 |
| 30S ribosomal protein S7 | H | protein | 156 | Escherichia coli K-12 | P02359 |
| 30S ribosomal protein S8 | I | protein | 130 | Escherichia coli K-12 | P0A7W7 |
| 30S ribosomal protein S9 | J | protein | 130 | Escherichia coli K-12 | P0A7X3 |
| 30S ribosomal protein S10 | K | protein | 103 | Escherichia coli K-12 | P0A7R5 |
| 30S ribosomal protein S11 | L | protein | 129 | Escherichia coli K-12 | P0A7R9 |
17 more molecules are not listed.
Sequence of entity 1 (A), FASTA
>9GUW_1 16S ribosomal RNA (chains A)
AAAUUGAAGAGUUUGAUCAUGGCUCAGAUUGAACGCUGGCGGCAGGCCUAACACAUGCAA
GUCGAACGGUAACAGGAAGAAGCUUGCUUCUUUGCUGACGAGUGGCGGACGGGUGAGUAA
UGUCUGGGAAACUGCCUGAUGGAGGGGGAUAACUACUGGAAACGGUAGCUAAUACCGCAU
AACGUCGCAAGACCAAAGAGGGGUACCUUCGGGCCUCUUGCCAUCGGAUGUGCCCAGAUG
GGAUUAGCUAGUAGGUGGGGUAACGGCUCACCUAGGCGACGAUCCCUAGCUGGUCUGAGA
GGAUGACCAGCCACACUGGAACUGAGACACGGUCCAGACUCCUACGGGAGGCAGCAGUGG
GGAAUAUUGCACAAUGGGCGCAAGCCUGAUGCAGCCAUGCCGCGUGUAUGAAGAAGGCCU
UCGGGUUGUAAAGUACUUUCAGCGGGGAGGAAGGGAGUAAAGUUAAUACCUUUGCUCAUU
GACGUUACCCGCAGAAGAAGCACCGGCUAACUCCGUGCCAGCAGCCGCGGUAAUACGGAG
GGUGCAAGCGUUAAUCGGAAUUACUGGGCGUAAAGCGCACGCAGGCGGUUUGUUAAGUCA
GAUGUGAAAUCCCCGGGCUCAACCUGGGAACUGCAUCUGAUACUGGCAAGCUUGAGUCUC
GUAGAGGGGGGUAGAAUUCCAGGUGUAGCGGUGAAAUGCGUAGAGAUCUGGAGGAAUACC
GGUGGCGAAGGCGGCCCCCUGGACGAAGACUGACGCUCAGGUGCGAAAGCGUGGGGAGCA
AACAGGAUUAGAUACCCUGGUAGUCCACGCCGUAAACGAUGUCGACUUGGAGGUUGUGCC
CUUGAGGCGUGGCUUCCGGAGCUAACGCGUUAAGUCGACCGCCUGGGGAGUACGGCCGCA
AGGUUAAAACUCAAAUGAAUUGACGGGGGCCCGCACAAGCGGUGGAGCAUGUGGUUUAAU
UCGAUGCAACGCGAAGAACCUUACCUGGUCUUGACAUCCACGGAAGUUUUCAGAGAUGAG
AAUGUGCCUUCGGGAACCGUGAGACAGGUGCUGCAUGGCUGUCGUCAGCUCGUGUUGUGA
AAUGUUGGGUUAAGUCCCGCAACGAGCGCAACCCUUAUCCUUUGUUGCCAGCGGUCCGGC
CGGGAACUCAAAGGAGACUGCCAGUGAUAAACUGGAGGAAGGUGGGGAUGACGUCAAGUC
AUCAUGGCCCUUACGACCAGGGCUACACACGUGCUACAAUGGCGCAUACAAAGAGAAGCG
ACCUCGCGAGAGCAAGCGGACCUCAUAAAGUGCGUCGUAGUCCGGAUUGGAGUCUGCAAC
UCGACUCCAUGAAGUCGGAAUCGCUAGUAAUCGUGGAUCAGAAUGCCACGGUGAAUACGU
UCCCGGGCCUUGUACACACCGCCCGUCACACCAUGGGAGUGGGUUGCAAAAGAAGUAGGU
AGCUUAACCUUCGGGAGGGCGCUUACCACUUUGUGAUUCAUGACUGGGGUGAAGUCGUAA
CAAGGUAACCGUAGGGGAACCUGCGGUUGGAUCACCUCCUU
Sequence of entity 2 (B), FASTA
>9GUW_2 30S ribosomal protein S1 (chains B)
MTESFAQLFEESLKEIETRPGSIVRGVVVAIDKDVVLVDAGLKSESAIPAEQFKNAQGEL
EIQVGDEVDVALDAVEDGFGETLLSREKAKRHEAWITLEKAYEDAETVTGVINGKVKGGF
TVELNGIRAFLPGSLVDVRPVRDTLHLEGKELEFKVIKLDQKRNNVVVSRRAVIESENSA
ERDQLLENLQEGMEVKGIVKNLTDYGAFVDLGGVDGLLHITDMAWKRVKHPSEIVNVGDE
ITVKVLKFDRERTRVSLGLKQLGEDPWVAIAKRYPEGTKLTGRVTNLTDYGCFVEIEEGV
EGLVHVSEMDWTNKNIHPSKVVNVGDVVEVMVLDIDEERRRISLGLKQCKANPWQQFAET
HNKGDRVEGKIKSITDFGIFIGLDGGIDGLVHLSDISWNVAGEEAVREYKKGDEIAAVVL
QVDAERERISLGVKQLAEDPFNNWVALNKKGAIVTGKVTAVDAKGATVELADGVEGYLRA
SEASRDRVEDATLVLSVGDEVEAKFTGVDRKNRAISLSVRAKDEADEKDAIATVNKQEDA
NFSNNAMAEAFKAAKGE
Sequence of entity 3 (C), FASTA
>9GUW_3 30S ribosomal protein S2 (chains C)
MATVSMRDMLKAGVHFGHQTRYWNPKMKPFIFGARNKVHIINLEKTVPMFNEALAELNKI
ASRKGKILFVGTKRAASEAVKDAALSCDQFFVNHRWLGGMLTNWKTVRQSIKRLKDLETQ
SQDGTFDKLTKKEALMRTRELEKLENSLGGIKDMGGLPDALFVIDADHEHIAIKEANNLG
IPVFAIVDTNSDPDGVDFVIPGNDDAIRAVTLYLGAVAATVREGRSQDLASQAEESFVEA
E
Sequence of entity 4 (D), FASTA
>9GUW_4 Small ribosomal subunit protein uS3 (chains D)
MGQKVHPNGIRLGIVKPWNSTWFANTKEFADNLDSDFKVRQYLTKELAKASVSRIVIERP
AKSIRVTIHTARPGIVIGKKGEDVEKLRKVVADIAGVPAQINIAEVRKPELDAKLVADSI
TSQLERRVMFRRAMKRTVQNAMRLGAKGIKVEVSGRLGGAEIARTEWYREGRVPLHTLRA
DIDYNTSEAHTTYGVIGVKVWIFKGEILGGMAAVEQPEKPAAQPKKQQRKGRK
Sequence of entity 5 (E), FASTA
>9GUW_5 Small ribosomal subunit protein uS4 (chains E)
MARYLGPKLKLSRREGTDLFLKSDVRAIDTKCKIEQAPGQHGARKPRLSDYGVQLREKQK
VRRIYGVLERQFRNYYKEAARLKGNTGENLLALLEGRLDNVVYRMGFGATRAEARQLVSH
KAIMVNGRVVNIASYQVSPNDVVSIREKAKKQSRVKAALELAEQREKPTWLEVDAGKMEG
TFKRKPERSDLSADINEHLIVELYSK
Sequence of entity 6 (F), FASTA
>9GUW_6 30S ribosomal protein S5 (chains F)
ELQEKLIAVNRVSKTVKGGRIFSFTALTVVGDGNGRVGFGYGKAREVPAAIQKAMEKARR
NMINVALNNGTLQHPVKGVHTGSRVFMQPASEGTGIIAGGAMRAVLEVAGVHNVLAKAYG
STNPINVVRATIDGLENMNSPEMVAAKRGKSVEEILG
Sequence of entity 7 (G), FASTA
>9GUW_7 Small ribosomal subunit protein bS6 (chains G)
MRHYEIVFMVHPDQSEQVPGMIERYTAAITGAEGKIHRLEDWGRRQLAYPINKLHKAHYV
LMNVEAPQEVIDELETTFRFNDAVIRSMVMRTKHAVTEASPMVKAKDERRERRDDFANET
ADDADAGDSEE
Sequence of entity 8 (H), FASTA
>9GUW_8 30S ribosomal protein S7 (chains H)
MPRRRVIGQRKILPDPKFGSELLAKFVNILMVDGKKSTAESIVYSALETLAQRSGKSELE
AFEVALENVRPTVEVKSRRVGGSTYQVPVEVRPVRRNALAMRWIVEAARKRGDKSMALRL
ANELSDAAENKGTAVKKREDVHRMAEANKAFAHYRW
Sequence of entity 9 (I), FASTA
>9GUW_9 30S ribosomal protein S8 (chains I)
MSMQDPIADMLTRIRNGQAANKAAVTMPSSKLKVAIANVLKEEGFIEDFKVEGDTKPELE
LTLKYFQGKAVVESIQRVSRPGLRIYKRKDELPKVMAGLGIAVVSTSKGVMTDRAARQAG
LGGEIICYVA
Sequence of entity 10 (J), FASTA
>9GUW_10 30S ribosomal protein S9 (chains J)
MAENQYYGTGRRKSSAARVFIKPGNGKIVINQRSLEQYFGRETARMVVRQPLELVDMVEK
LDLYITVKGGGISGQAGAIRHGITRALMEYDESLRSELRKAGFVTRDARQVERKKVGLRK
ARRRPQFSKR
Sequence of entity 11 (K), FASTA
>9GUW_11 30S ribosomal protein S10 (chains K)
MQNQRIRIRLKAFDHRLIDQATAEIVETAKRTGAQVRGPIPLPTRKERFTVLISPHVNKD
ARDQYEIRTHLRLVDIVEPTEKTVDALMRLDLAAGVDVQISLG
Sequence of entity 12 (L), FASTA
>9GUW_12 30S ribosomal protein S11 (chains L)
MAKAPIRARKRVRKQVSDGVAHIHASFNNTIVTITDRQGNALGWATAGGSGFRGSRKSTP
FAAQVAAERCADAVKEYGIKNLEVMVKGPGPGRESTIRALNAAGFRITNITDVTPIPHNG
CRPPKKRRV
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| ZN | Zinc ion | Zn | 3 |
| MG | Magnesium ion | Mg | 118 |
Primary citation
Molecular basis of mRNA delivery to the bacterial ribosome. Webster, M.W., Chauvier, A., Rahil, H. et al. Science (2024) 386:eado8476-eado8476. DOI 10.1126/science.ado8476 · PubMed
Other PDB entries of the same protein (UniProt P0AG67 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 2BH8 1.9 Å, Combinatorial Protein 1b11
- 9GUU 2.5 Å, 30S mRNA delivery complex (consensus)
- 9IOT 2.7 Å, Cryo-EM structure of Escherichia coli hibernating ribosome with RNase I mutant
- 9GUP 2.8 Å, 30S mRNA delivery complex (open head)
- 9GUT 2.8 Å, 30S mRNA delivery complex (bS1 resolved)
- 4Q7J 2.9 Å, Complex structure of viral RNA polymerase
- 6H4N 3.0 Å, Structure of a hibernating 100S ribosome reveals an inactive conformation of the…
- 9GUV 3.0 Å, 30S mRNA delivery complex (closed-head)
- 6X7K 3.1 Å, Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B3…
- 8URY 3.1 Å, Escherichia coli transcription-translation coupled complex class B (TTC-B) containing…
- 9GUQ 3.1 Å, 30S PIC (Pre-Initiation complex)
- 6X6T 3.2 Å, Cryo-EM structure of an Escherichia coli coupled transcription-translation complex B1…
Browse structure collections
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