Large ribosomal subunit protein uL11 (RPL12) is a 165-residue protein from Oryctolagus cuniculus. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: G1SMR7.
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The mean pLDDT of this model is 70.8 (confident overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 0% |
| 70 to 90 | Confident: backbone generally right | 61% |
| 50 to 70 | Low: treat with caution | 37% |
| Below 50 | Very low: often disordered regions | 2% |
What pLDDT means and how to read it
Component of the large ribosomal subunit (PubMed:26245381, PubMed:27863242, PubMed:30517857). The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell (PubMed:26245381, PubMed:27863242, PubMed:30517857). Binds directly to 26S ribosomal RNA (By similarity)
Component of the large ribosomal subunit. Mature ribosomes consist of a small (40S) and a large (60S) subunit (PubMed:26245381, PubMed:27863242, PubMed:29856316, PubMed:30293783, PubMed:30355441, PubMed:30517857, PubMed:31246176, PubMed:31768042, PubMed:33296660). The 40S subunit contains about 33 different proteins and 1 molecule of RNA (18S) (PubMed:26245381, PubMed:27863242, PubMed:29856316,…
Cytoplasm
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 7O7Y | EM | 2.2 Å | Bt=1-165 |
| 7O7Z | EM | 2.4 Å | Bt=1-165 |
| 8SCB | EM | 2.5 Å | t=1-165 |
| 9RHU | EM | 2.65 Å | n2=1-165 |
| 8VVQ | EM | 2.7 Å | RA=1-165 |
| 6SGC | EM | 2.8 Å | t2=1-165 |
| 8BPO | EM | 2.8 Å | r2=1-165 |
| 9QQA | EM | 2.8 Å | Bt=1-165 |
| 9NDP | EM | 2.82 Å | t=1-165 |
| 9Q7Q | EM | 2.86 Å | t=1-165 |
| 7O80 | EM | 2.9 Å | Bt=1-165 |
| 7TOR | EM | 2.9 Å | AL12=9-161 |
| 8P2K | EM | 2.9 Å | Bt=1-165 |
| 8VVP | EM | 2.9 Å | RA=1-165 |
| 8VVT | EM | 2.9 Å | RA=1-165 |
| 6R5Q | EM | 3.0 Å | t=9-161 |
| 9F1B | EM | 3.01 Å | Bt=1-165 |
| 6R6P | EM | 3.1 Å | t=1-163 |
| 7O81 | EM | 3.1 Å | Bt=1-165 |
| 7TOQ | EM | 3.1 Å | AL12=1-163 |
Showing 20 of 61 experimental structures (best resolution first).
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