Large ribosomal subunit protein uL3 (RPL3) is a 403-residue protein from Oryctolagus cuniculus. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: G1TL06.
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The mean pLDDT of this model is 97.2 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 98% |
| 70 to 90 | Confident: backbone generally right | 2% |
| 50 to 70 | Low: treat with caution | 0% |
| Below 50 | Very low: often disordered regions | 0% |
What pLDDT means and how to read it
Component of the large ribosomal subunit (PubMed:26245381, PubMed:27863242). The ribosome is a large ribonucleoprotein complex responsible for the synthesis of proteins in the cell (PubMed:26245381, PubMed:27863242)
Component of the large ribosomal subunit (PubMed:26245381, PubMed:27863242, PubMed:29856316, PubMed:30293783, PubMed:30355441, PubMed:31246176, PubMed:31609474, PubMed:31768042, PubMed:33296660, PubMed:35679869, PubMed:35709277, PubMed:36653451). Interacts with DHX33 (By similarity). Interacts with GRWD1 (By similarity)
Nucleus, nucleolus, Cytoplasm
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 7O7Y | EM | 2.2 Å | BB=1-403 |
| 7OYD | EM | 2.3 Å | B=1-403 |
| 7O7Z | EM | 2.4 Å | BB=1-403 |
| 8SCB | EM | 2.5 Å | B=1-403 |
| 9MR4 | EM | 2.65 Å | B=1-403 |
| 9RHU | EM | 2.65 Å | E3=1-403 |
| 8RJB | EM | 2.69 Å | w=1-403 |
| 8VVQ | EM | 2.7 Å | B=1-403 |
| 8B6C | EM | 2.79 Å | B=2-395 |
| 8RJD | EM | 2.79 Å | w=1-403 |
| 6SGC | EM | 2.8 Å | B2=1-403 |
| 7OBR | EM | 2.8 Å | B=2-403 |
| 7UCK | EM | 2.8 Å | B=2-395 |
| 7ZJW | EM | 2.8 Å | LE=1-403 |
| 8BPO | EM | 2.8 Å | B2=1-403 |
| 9BDL | EM | 2.8 Å | AL03=2-395 |
| 9QQA | EM | 2.8 Å | BB=1-403 |
| 9NDP | EM | 2.82 Å | B=1-403 |
| 7QWQ | EM | 2.83 Å | B=1-403 |
| 8B5L | EM | 2.86 Å | B=2-395 |
Showing 20 of 97 experimental structures (best resolution first).
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