P05214: Tubulin alpha-3 chain (Tuba3a)

Tubulin alpha-3 chain (Tuba3a) is a 450-residue protein from Mus musculus. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P05214.

Gene
Tuba3a
Organism
Mus musculus
Length
450 residues
Mean pLDDT
91.6
Model
AF-P05214-F1 v6
Model created
1 Aug 2025
PDB structures
4

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Model confidence (pLDDT)

The mean pLDDT of this model is 91.6 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate81%
70 to 90Confident: backbone generally right14%
50 to 70Low: treat with caution4%
Below 50Very low: often disordered regions1%

What pLDDT means and how to read it

Function

Tubulin is the major constituent of microtubules, a cylinder consisting of laterally associated linear protofilaments composed of alpha- and beta-tubulin heterodimers. Microtubules grow by the addition of GTP-tubulin dimers to the microtubule end, where a stabilizing cap forms. Below the cap, tubulin dimers are in GDP-bound state, owing to GTPase activity of alpha-tubulin

Subunit structure

Dimer of alpha and beta chains. A typical microtubule is a hollow water-filled tube with an outer diameter of 25 nm and an inner diameter of 15 nM. Alpha-beta heterodimers associate head-to-tail to form protofilaments running lengthwise along the microtubule wall with the beta-tubulin subunit facing the microtubule plus end conferring a structural polarity. Microtubules usually have 13…

Subcellular location

Cytoplasm, cytoskeleton, Cytoplasm, cytoskeleton, flagellum axoneme

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
8IYJEM3.5 ÅAA/AC/AE/AG/AI/AK/AM/AO/BC/BE/BG/BI/BK/BM/BO/CC/CE/CG/CI/CK/CM/CO/CQ/DC/DE/DG/DI/DK/DM/DO=1-450
8I7OEM4.5 ÅAE/AG/AI/BE/BG/BI/CG/CI/DE/DG/EE/EG/FE/FG/GE/GG/GI/HE/HG/HI/IE/IG/II/JE/JG/KE/KG/KI/LE/LG=1-438
8I7REM6.5 ÅAC/AE/AG/AI/AK/AM/BC/BE/BG/BI/BK/BM/CC/CE/CG/CI/CK/CM/DA/DC/DE/DG/DI/DK/EA/EC/EE/EG/EI/EK=1-438
9IJJEM7.7 ÅAc/Ae/Ag/Ai/Ak/Ao/Aq/As/Au/Aw/Bc/Be/Bg/Bi/Bk/Bm/Bo/Bq/Bs/Bu/Cc/Ce/Cg/Ci/Ck/Cm/Co/Cq/Cs/Cu=1-450

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