8I7O: Tektin-1
In situ structure of axonemal doublet microtubules in mouse sperm with 16-nm repeat. Determined by electron microscopy at 4.5 Å resolution. Released 11 Oct 2023.
- Method
- Electron microscopy
- Resolution
- 4.5 Å
- Organism
- Mus musculus
- Chains
- 189
- Atoms
- 540,760
- Mol. weight
- 9097.62 kDa
- Ligands
- GTP
- Released
- 11 Oct 2023
Explore 8I7O in 3D
Show helices and sheets
RCSB PDB
PDBe
Secondary structure: helices and β-sheets
8I7O contains 3,068 α-helices and 2,157 β-strands across 189 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
Chain A2: 6 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 52-104 | 53 | |
| α-helix | 106-120 | 15 | |
| α-helix | 131-190 | 60 | |
| α-helix | 214-305 | 92 | |
| α-helix | 307-319 | 13 | |
| α-helix | 332-394 | 63 | |
Chain A3: 3 helices, 0 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 13-104 | 92 | |
| α-helix | 145-190 | 46 | |
| α-helix | 214-252 | 39 | |
Chain AE: 20 helices, 14 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 5-9 | 5 | 61 |
| α-helix | 11-27 | 17 | |
| β-strand | 53-54 | 2 | 62 |
| β-strand | 62-63 | 2 | 62 |
| β-strand | 65-69 | 5 | 61 |
| α-helix | 72-79 | 8 | |
| α-helix | 89-91 | 3 | |
| β-strand | 92-94 | 3 | 61 |
| α-helix | 103-104 | 2 | |
| α-helix | 105-109 | 5 | |
| α-helix | 112-128 | 17 | |
| β-strand | 134-140 | 7 | 61 |
| α-helix | 146-160 | 15 | |
| β-strand | 165-171 | 7 | 61 |
| α-helix | 172-174 | 3 | |
| α-helix | 183-194 | 12 | |
| β-strand | 200-204 | 5 | 61 |
| α-helix | 206-215 | 10 | |
| α-helix | 224-243 | 20 | |
| α-helix | 252-259 | 8 | |
| β-strand | 269-272 | 4 | 61 |
| α-helix | 278-283 | 6 | |
| α-helix | 288-295 | 8 | |
| α-helix | 298-300 | 3 | |
| β-strand | 301 | 1 | 61 |
| β-strand | 312-321 | 10 | 61 |
| α-helix | 325-337 | 13 | |
| β-strand | 343 | 1 | 61 |
| β-strand | 351-356 | 6 | 61 |
| α-helix | 359-362 | 4 | |
| β-strand | 373-381 | 9 | 61 |
| α-helix | 385-400 | 16 | |
| α-helix | 405-411 | 7 | |
| α-helix | 416-436 | 21 | |
Chain AF: 22 helices, 19 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 2-9 | 8 | 79 |
| α-helix | 11-27 | 17 | |
| β-strand | 30 | 1 | 80 |
| β-strand | 36 | 1 | 80 |
| α-helix | 41-46 | 6 | |
| α-helix | 47-49 | 3 | |
| β-strand | 51 | 1 | 81 |
| β-strand | 54 | 1 | 82 |
| β-strand | 58 | 1 | 82 |
| β-strand | 61 | 1 | 81 |
| β-strand | 63-67 | 5 | 79 |
| α-helix | 70-78 | 9 | |
| β-strand | 90-92 | 3 | 79 |
| α-helix | 102 | 1 | |
| α-helix | 103-107 | 5 | |
| α-helix | 109-111 | 3 | |
| α-helix | 113-126 | 14 | |
| β-strand | 129-136 | 8 | 79 |
| α-helix | 142-158 | 17 | |
| β-strand | 163-167 | 5 | 79 |
| β-strand | 170 | 1 | 83 |
| α-helix | 171-172 | 2 | |
| α-helix | 181-195 | 15 | |
| β-strand | 198-200 | 3 | 79 |
| β-strand | 203 | 1 | 83 |
| α-helix | 204-210 | 7 | |
| α-helix | 211-215 | 5 | |
| α-helix | 222-237 | 16 | |
| α-helix | 250-257 | 8 | |
| β-strand | 265-266 | 2 | 79 |
| β-strand | 267 | 1 | 84 |
| α-helix | 278-281 | 4 | |
| α-helix | 286-293 | 8 | |
| β-strand | 310-318 | 9 | 84 |
| α-helix | 323-336 | 14 | |
| β-strand | 349-354 | 6 | 84 |
| α-helix | 357-358 | 2 | |
| β-strand | 364-371 | 8 | 84 |
| α-helix | 375-389 | 15 | |
| α-helix | 395-401 | 7 | |
| α-helix | 405-426 | 22 | |
Chain AG: 24 helices, 12 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 5-9 | 5 | 101 |
| α-helix | 11-28 | 18 | |
| α-helix | 48-51 | 4 | |
| β-strand | 65-69 | 5 | 101 |
| α-helix | 72-79 | 8 | |
| α-helix | 82-84 | 3 | |
| α-helix | 89-91 | 3 | |
| β-strand | 92-94 | 3 | 101 |
| α-helix | 103-104 | 2 | |
| α-helix | 105-109 | 5 | |
| α-helix | 111-113 | 3 | |
| α-helix | 115-128 | 14 | |
| β-strand | 134-140 | 7 | 101 |
| α-helix | 146-160 | 15 | |
| β-strand | 165-171 | 7 | 101 |
| α-helix | 172-174 | 3 | |
| α-helix | 183-194 | 12 | |
| β-strand | 200-204 | 5 | 101 |
| α-helix | 206-212 | 7 | |
| α-helix | 213-217 | 5 | |
| α-helix | 224-243 | 20 | |
| α-helix | 252-259 | 8 | |
| β-strand | 269 | 1 | 102 |
| β-strand | 272 | 1 | 102 |
| α-helix | 278-283 | 6 | |
| α-helix | 288-295 | 8 | |
| α-helix | 307-309 | 3 | |
| β-strand | 312-320 | 9 | 102 |
| α-helix | 325-337 | 13 | |
| β-strand | 343 | 1 | 102 |
| β-strand | 351-356 | 6 | 102 |
| α-helix | 359-360 | 2 | |
| β-strand | 374-381 | 8 | 102 |
| α-helix | 385-400 | 16 | |
| α-helix | 405-410 | 6 | |
| α-helix | 416-436 | 21 | |
Chain AH: 22 helices, 16 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 2-9 | 8 | 113 |
| α-helix | 10-27 | 18 | |
| α-helix | 41-45 | 5 | |
| α-helix | 46-49 | 4 | |
| β-strand | 51 | 1 | 114 |
| β-strand | 61 | 1 | 114 |
| β-strand | 63-66 | 4 | 113 |
| α-helix | 70-78 | 9 | |
| α-helix | 82-84 | 3 | |
| β-strand | 90-91 | 2 | 113 |
| α-helix | 101-102 | 2 | |
| α-helix | 103-107 | 5 | |
| α-helix | 109-111 | 3 | |
| α-helix | 113-126 | 14 | |
| β-strand | 129-136 | 8 | 113 |
| α-helix | 142-158 | 17 | |
| β-strand | 163-170 | 8 | 113 |
| α-helix | 171-172 | 2 | |
| α-helix | 181-195 | 15 | |
| β-strand | 198-203 | 6 | 113 |
| α-helix | 204-210 | 7 | |
| α-helix | 211-215 | 5 | |
| α-helix | 222-237 | 16 | |
| α-helix | 250-257 | 8 | |
| β-strand | 265-266 | 2 | 113 |
| β-strand | 267 | 1 | 115 |
| β-strand | 270 | 1 | 115 |
| α-helix | 286-293 | 8 | |
| α-helix | 305-307 | 3 | |
| β-strand | 310-318 | 9 | 115 |
| α-helix | 323-336 | 14 | |
| β-strand | 342 | 1 | 116 |
| β-strand | 345 | 1 | 116 |
| β-strand | 349-354 | 6 | 115 |
| β-strand | 364-371 | 8 | 115 |
| α-helix | 374-389 | 16 | |
| α-helix | 395-401 | 7 | |
| α-helix | 406-426 | 21 | |
Chain AI: 21 helices, 13 β-strands
| Element | Residues | Length | Sheet |
|---|
| β-strand | 4-9 | 6 | 131 |
| α-helix | 11-28 | 18 | |
| α-helix | 48-51 | 4 | |
| β-strand | 53 | 1 | 132 |
| β-strand | 63 | 1 | 132 |
| β-strand | 65-69 | 5 | 131 |
| α-helix | 73-79 | 7 | |
| α-helix | 89-91 | 3 | |
| β-strand | 92-94 | 3 | 131 |
| α-helix | 103-104 | 2 | |
| α-helix | 105-109 | 5 | |
| α-helix | 112-126 | 15 | |
| β-strand | 134-140 | 7 | 131 |
| α-helix | 146-160 | 15 | |
| β-strand | 165-171 | 7 | 131 |
| α-helix | 172-174 | 3 | |
| α-helix | 183-194 | 12 | |
| β-strand | 200-204 | 5 | 131 |
| α-helix | 206-215 | 10 | |
| α-helix | 224-243 | 20 | |
| α-helix | 252-259 | 8 | |
| β-strand | 269-272 | 4 | 133 |
| α-helix | 278-283 | 6 | |
| α-helix | 288-295 | 8 | |
| α-helix | 298-300 | 3 | |
| β-strand | 312-320 | 9 | 133 |
| α-helix | 325-337 | 13 | |
| β-strand | 343 | 1 | 133 |
| β-strand | 351-356 | 6 | 133 |
| α-helix | 359-361 | 3 | |
| β-strand | 374-381 | 8 | 133 |
| α-helix | 385-401 | 17 | |
| α-helix | 405-411 | 7 | |
| α-helix | 416-436 | 21 | |
Chain B2: 8 helices, 2 β-strands
| Element | Residues | Length | Sheet |
|---|
| α-helix | 92-104 | 13 | |
| α-helix | 108-121 | 14 | |
| α-helix | 125-127 | 3 | |
| β-strand | 129 | 1 | 146 |
| α-helix | 132-158 | 27 | |
| α-helix | 238-320 | 83 | |
| α-helix | 326-328 | 3 | |
| β-strand | 330 | 1 | 147 |
| α-helix | 333-391 | 59 | |
| α-helix | 395-397 | 3 | |
179 more chain groups are not listed. Open the entry in the viewer and use the sequence panel to see them.
Molecules and chains
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|
| Tektin-1 | A2, A3 | protein | 418 | Mus musculus | Q9DAJ2 (AlphaFold model) |
| Detyrosinated tubulin alpha-3 chain | AE, AG, AI, BE, BG, BI, CG, CI, DE, DG, EE, EG, FE, FG, GE, GG, GI, HE, HG, HI, IE, IG, II, JE, JG, KE, KG, KI, LE, LG, LI, ME, MG, MI, NE, NG, NI, OE, OG, OI, PE, PG, PI, QE, QG, QI, RE, RG, RI, SE, SG, SI, TG, TI, UE, UG, VE, VG, WE, WG, WI | protein | 438 | Mus musculus | P05214 (AlphaFold model) |
| Tubulin beta-4B chain | AF, AH, BF, BH, CF, CH, CJ, DD, DF, DH, ED, EF, EH, FD, FF, FH, GD, GF, GH, HD, HF, HH, IF, IH, JD, JF, JH, KD, KF, KH, LD, LF, LH, MF, MH, ND, NF, NH, OD, OF, OH, PF, PH, QF, QH, RF, RH, RJ, SF, SH, SJ, TF, TH, TJ, UD, UF, UH, VD, VF, VH, WF, WH | protein | 427 | Mus musculus | P68372 (AlphaFold model) |
| Tektin-2 | B2, B3, B7, B8 | protein | 430 | Mus musculus | Q922G7 (AlphaFold model) |
| Tektin-3 | C2, C3, C4, C7, C8, Cb, Cc | protein | 490 | Mus musculus | Q6X6Z7 |
| Tektin-4 | D2, D3, D4, D7, D8, D9 | protein | 447 | Mus musculus | Q149S1 |
| Tektin bundle-interacting protein 1 | E2, E3 | protein | 206 | Mus musculus | A6H6Q4 |
| Tektin-5 | F2, F3, F6, F7, Fa, Fb, Fc, Fl | protein | 557 | Mus musculus | G5E8A8 |
| EF-hand domain-containing protein 1 | G1, G2 | protein | 648 | Mus musculus | Q9D9T8 |
| EF-hand domain-containing family member C2 | G5 | protein | 750 | Mus musculus | Q9D485 |
| Protein FAM166A | H3, H4 | protein | 319 | Mus musculus | Q9D4K5 |
| Protein FAM166C | I2, I3 | protein | 200 | Mus musculus | Q9DAS2 |
12 more molecules are not listed.
Sequence of entity 1 (A2, A3), FASTA
>8I7O_1 Tektin-1 (chains A2, A3)
MAKLLQSPPRFLPEEWYIANKSQYHRAEAQRSQSERLVAESQRLVEEIEKTTRKSQSDVN
KKLEQRLEEVRFWKKELDDKLEQLVNQTDDLLTYKTRLERSLESYKEPLHITEKCLEYRE
KRVGIDLVHDVVEQELQKEADIIHGVMNLLIRTLEESTEQIRLNRSAKYNLEKDLRDKFT
AITIDDVCFSLNNNSPNINFSEKVVRIEPNSVSLEDWLDFSNANVEKADKQLNNSTALKT
LVDQILSQTANDLRRQCEVVDEAFINGLKETKDARNKLADHLAKVMEEIASQEKNIMALE
NAITQQEGPAKVAHTRLETRTHRPNVELCRDIAQYRLIKEIQEINHNVARLKETLAQAQT
QLKALYRRQLALQEEIQVKENTIYIDQVLCMEMRKSIPPRDGDDHGAWEGGIRAEAIC
Sequence of entity 2 (AE, AG, AI, BE, BG, BI, CG, CI, DE, DG, EE, EG, FE, FG, GE, GG, GI, HE, HG, HI, IE, IG, II, JE, JG, KE, KG, KI, LE, LG, LI, ME, MG, MI, NE, NG, NI, OE, OG, OI, PE, PG, PI, QE, QG, QI, RE, RG, RI, SE, SG, SI, TG, TI, UE, UG, VE, VG, WE, WG, WI), FASTA
>8I7O_2 Detyrosinated tubulin alpha-3 chain (chains AE, AG, AI, BE, BG, BI, CG, CI, DE, DG, EE, EG, FE, FG, GE, GG, GI, HE, HG, HI, IE, IG, II, JE, JG, KE, KG, KI, LE, LG, LI, ME, MG, MI, NE, NG, NI, OE, OG, OI, PE, PG, PI, QE, QG, QI, RE, RG, RI, SE, SG, SI, TG, TI, UE, UG, VE, VG, WE, WG, WI)
MRECISIHVGQAGVQIGNACWELYCLEHGIQPDGQMPSDKTIGGGDDSFNTFFSETGAGK
HVPRAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVLD
RIRKLADLCTGLQGFLIFHSFGGGTGSGFASLLMERLSVDYGKKSKLEFAIYPAPQVSTA
VVEPYNSILTTHTTLEHSDCAFMVDNEAIYDICRRNLDIERPTYTNLNRLIGQIVSSITA
SLRFDGALNVDLTEFQTNLVPYPRIHFPLATYAPVISAEKAYHEQLSVAEITNACFEPAN
QMVKCDPRHGKYMACCMLYRGDVVPKDVNAAIATIKTKRTIQFVDWCPTGFKVGINYQPP
TVVPGGDLAKVQRAVCMLSNTTAIAEAWARLDHKFDLMYAKRAFVHWYVGEGMEEGEFSE
AREDLAALEKDYEEVGVD
Sequence of entity 3 (AF, AH, BF, BH, CF, CH, CJ, DD, DF, DH, ED, EF, EH, FD, FF, FH, GD, GF, GH, HD, HF, HH, IF, IH, JD, JF, JH, KD, KF, KH, LD, LF, LH, MF, MH, ND, NF, NH, OD, OF, OH, PF, PH, QF, QH, RF, RH, RJ, SF, SH, SJ, TF, TH, TJ, UD, UF, UH, VD, VF, VH, WF, WH), FASTA
>8I7O_3 Tubulin beta-4B chain (chains AF, AH, BF, BH, CF, CH, CJ, DD, DF, DH, ED, EF, EH, FD, FF, FH, GD, GF, GH, HD, HF, HH, IF, IH, JD, JF, JH, KD, KF, KH, LD, LF, LH, MF, MH, ND, NF, NH, OD, OF, OH, PF, PH, QF, QH, RF, RH, RJ, SF, SH, SJ, TF, TH, TJ, UD, UF, UH, VD, VF, VH, WF, WH)
MREIVHLQAGQCGNQIGAKFWEVISDEHGIDPTGTYHGDSDLQLERINVYYNEATGGKYV
PRAVLVDLEPGTMDSVRSGPFGQIFRPDNFVFGQSGAGNNWAKGHYTEGAELVDSVLDVV
RKEAESCDCLQGFQLTHSLGGGTGSGMGTLLISKIREEYPDRIMNTFSVVPSPKVSDTVV
EPYNATLSVHQLVENTDETYCIDNEALYDICFRTLKLTTPTYGDLNHLVSATMSGVTTCL
RFPGQLNADLRKLAVNMVPFPRLHFFMPGFAPLTSRGSQQYRALTVPELTQQMFDAKNMM
AACDPRHGRYLTVAAVFRGRMSMKEVDEQMLNVQNKNSSYFVEWIPNNVKTAVCDIPPRG
LKMSATFIGNSTAIQELFKRISEQFTAMFRRKAFLHWYTGEGMDEMEFTEAESNMNDLVS
EYQQYQD
Sequence of entity 4 (B2, B3, B7, B8), FASTA
>8I7O_4 Tektin-2 (chains B2, B3, B7, B8)
MATLSFKPSERYRLSDWRTNSYLLSTNAERQRDASHQIRQEARILRNETNNQIVWDEHDN
RTRLAERIDTVNRWKETLDKCLTDLDAEIDSLAQAKESAEQNLQAKNLPLDVAIECLTLR
ESRRDIDVVRDPVEEELLKEVEVIEATKKVLQEKISQAFQHLCLLQEIRQQLNSDHRDKM
ETLEIDRGCLSLNLTSPNISLKVNPTRIPKDSTTLQQWDEFTRFNKNRAEAEMKASIELR
EAIALAIAQTNNELDAQRVATEFTFRKRLREMESFYSELKWQEKNTLEEIAELQGDIRRL
EEDLRRKMMNLKLAHTRLESRTYRSNVELCRDQTQYGLIDEVHQLEATINTMKQKLAQTQ
NALDALFKHLARIQADIACKTNTLLLDTKCMDTRRKLTVPAEKFVPQVDTFTRTTNRTLS
PLKICQLELT
Sequence of entity 5 (C2, C3, C4, C7, C8, Cb, Cc), FASTA
>8I7O_5 Tektin-3 (chains C2, C3, C4, C7, C8, Cb, Cc)
MELLGSTLTATYAHPPPASASFLPAIGTITSSYKDRFPHRNLTHSLSLPWRPNTYYKTAY
NYPTLAPYSSRSQRVCESTMLPFVSNRTTFFTRYTPDDWYRSNLVSFQESNSSRHNSERL
RVDTSRLIQDKYQQIRKTQAHSTQNLGERVNDLAFWKSEITHELDEMIGETNALTDIKRR
LERGLIETEGPLQVSRECLFHREKRMGIDLVHDEAEKELLAEVDTILCCQERMRQHLDKA
NAQLASDRSAQHELEKDLSDKQAALRIDDKCQHLRNTSEGVSYFRGVERVDATVSVPETW
AKFTDDNVLRSQSERAASAKLREETENLLIVTANEMWNQFNKVNLAFTNRIAETVDAKNK
IHTHLTKTLQEIFQIEMTIESIKKAIKEKSAFLKVAQTRLDERTRRPNVELCRDMAQLRL
VNEVYEVDETIQTLQQRLRDSEDTLQSLAHTKATLEHDLAVKANTLYIDQEKCMSMRNSY
PSTLRLVGYC
Sequence of entity 6 (D2, D3, D4, D7, D8, D9), FASTA
>8I7O_6 Tektin-4 (chains D2, D3, D4, D7, D8, D9)
MAQTGVLLTKEPAPQSIDVCELPRKEYEVACNTGAYTSSGLATAGFRTAKYLRDEWFQNS
YARYHQAFADRDYSERQRHESGQLVAETGALAQRTQLDSTRKVGERLEDMHCWKSELQRE
IDELSSETDLMMAQKLRLQRALDATSVPYSIATDNLQCRERRQHPDLVRDYVEVELLKET
ELIRNIQELLKRTIGQAVDQIRLNREHKESCEMNWSDKVEVYNIDDTCSRYTNESTQVQF
YPHSSKFEESASTPETWAKFNHDNLLRAERERLASVNLRKLIDCILRDTAEDLRLQCDAV
NSAFSSRCQELDDSLQKLQYHLRKTLTEITDQEHQIAALKQAIKDKEAPLRVAQTRLYQR
SHRPNVELCRDNAQFRLLSEVEELNMSLRALKEKLQDAEQALRNLEDSRMSLEKDIAVKT
NSLFIDRQKCMTHRNRYPSVLQLAGYQ
Sequence of entity 7 (E2, E3), FASTA
>8I7O_7 Tektin bundle-interacting protein 1 (chains E2, E3)
MENVRREATRPSVPSGTLELYFPDHLYRNDYVSLEGPRWAPAIKQAVRWKFTPMGRDAAG
QVWFTGLTNSEPGDAWYKLPRALDTPYREAHTRWHGCFQSRQRGLPPAYTQHLREMAFWD
PAITAQYLNSGPRWGCMQWRDRQIRGKEFVVTRNQFGAKLPWRSDYVPLLSLPQRPRFTA
QDFRQRGLQRPCPAIGQPPPAFTPAL
Sequence of entity 8 (F2, F3, F6, F7, Fa, Fb, Fc, Fl), FASTA
>8I7O_8 Tektin-5 (chains F2, F3, F6, F7, Fa, Fb, Fc, Fl)
MEFLGTTQTASFCGPKKGCGLQALPPAGQEPVVQECYQPFHLPGYRYLNAWRPSVFHKIA
TSQTIPEECSGIRRPPTILPSLRSALFCRYTPRDWDRSNDLQIRNAEASRLWASRLTGDS
LRIMQDKDQLIHQMQEGTSRNLGQRLSDLGFWKSELCYELDRLLTENSSMDTLKRRLECA
AEEVNCPLQVALECLYNREKRIGIDLVHDNVEKNLIREVDLLKCCQDQMRKLAKRIDFQI
RDNRDAQHSLERDIEDKSSAQYIDENCFNLRSTSDSISFFHGVEKFDGTVSIPETWAKFS
NDNIRHAQNMRANSIRLREEAEHLFETLSDQMWKQFTNTNLAFNARISEETDVKNKLQTQ
LAKILQEIFQAENTIMLLERAIVAKEYPLKMAQTMLACRTRRPNVELCRDVPQFRLVNEV
FTIDDTLQTLKLRLRETQDTLQLLVMTKSRLEHELAIKANTLCIDKDKCMSMRKSFPSTP
RLTGYTCSAIGSGPYANHAPRISSGPCSGSALCKGPASCGGGASCGGGASCGGHAPCGSA
LCSHSVSRSGPGFAPVC
Sequence of entity 9 (G1, G2), FASTA
>8I7O_9 EF-hand domain-containing protein 1 (chains G1, G2)
MGTNPVHGLPFLPGSSFTDSTKTAFHRSQTLNYRNGYAVVRRPTMGIGGDRLHYNQLSQA
ELDELANKAPILTYGPLKQAPLAEFVPAHVAFDKKVLKFSAYFQEDVPISMEEHYRIRHV
NIYYYLEDDSMSVIEPVVENSGIPQGKLIKRQRFTKNDMGDHYHWKDLNRGINLTVYGKT
FRIVDCDRFTQDFLESQGIELNPSEKIPLDPYTQLRKEPVRKYVTPSDFDQLKQFLTFDK
QVLRFYAIWDDTDSLFGECRHYIIHYYLMDDTVEIREVHERNNGRDPFPLLMNRQRMPKV
LVENAKNFPKCVLEISDQEVLEWYTAKDFIVGKPLTILGRTFFIYDCDPFTRQFYKDKFG
MPDLPPVDVTKKEPPPVKQELPPYNGYGLIEDSAQNCFALIPKAPRKDVVKMLMNDNKVL
RYLAALESPIPEDKDRRFVFSYFLATDMISIFEPPVRNSGIIGGKFLGRTKVVKSFSPVD
NPIYYSPSDFFIGAVIEVFGHRFVILDTDEYVLKYMESNASQYSPEALASIQNRIQKPEL
PAPELESKQATGEPMVQGTEESKVQDLDALIDQIHMHLKYNSYKENLRETFQMYDKDESG
YVDRETFFKICETLNVPVDDSLIKELIRLCTHGEGRINYYNFVRAFSN
Sequence of entity 10 (G5), FASTA
>8I7O_10 EF-hand domain-containing family member C2 (chains G5)
MALPFLPGNSFNRNIGKERFHKSQHWGFCNNVRMLVSENKPGVGGDLLYGQKIKPKHSVF
PKGDGTDAPSWVAFDKQVLSFDAYLEDEISDKRQEIFRIRYYKIYFYLEDDTIQVNEPEV
INSGLPQGTSIRRQRIPYPPPNDDQFYTVYDFNINISVVFYGRTFKIYDCDPFTKNFLKK
IGIKLNPPGQCPLDPYMKMRRETLEFVDPFRPYQSFDTLKRFIQYDGKVLRFFCLWDDST
SLFGDRREFVLHYFLCDGTVEIREVLPSNSGRDAMSSFLRRGKLPKYGPPGIYQPGQITD
RAVLNVYGGLSEWRADGYLLDKYQLGKVEQDFYTDQDLSIGATINVWGRKVLLCDCDEFT
KTYYRTKYGVDNFTPISCKPPHLPKIERKYPPYTGFGSEEDSFRSCVGLKPTPHRKNFKK
FMELDSFGNISNILRYFGKLITHKCADVDRIFVIAFYLSDDTISVFEPIENNSGNAGGMF
LKRSRVKKPGQEVFKSEFSEYIKAEELYIGATVNINGYLFILLNADEYTLNYMENNTDKF
PYSNFELAIQKLKQEKSKSREITQVFAAADYNHTKVVPYNTFRDILMSITMGKLIDQELI
TIARHYRVPEIMDPDLAYLIARAHEKFKKNIFENFDMFIYNCVYEDREKKGVLPTKDIRR
MCKSSRLPLDDDFLDCLLSRFEDKDHQINYEIFFSVLNWRMNPTPDLQAPPYLKEKCEDV
WVGMPSPIPVKYVRYLDFLIDVYGLEDNML
Sequence of entity 11 (H3, H4), FASTA
>8I7O_11 Protein FAM166A (chains H3, H4)
MTATQKHNLFTPEPHYIPGYAGFYPQLRYQVGNTYGRTTAQLLTDPSVQKSPCSVLSPMT
KPKFIEDFSKSKPPWIPCRDLREPYIPHYTSLKPYKNFEILGQLPRQDVDTQGPPQVENR
QGPLTAGFMPYPPYPACPPGRKGEARDLGHPGLLLAYGEEAWKDAAPLQDTPGKNNQLYH
CRRDEYLPPHPPQETLDVGRFQRLPQLDHPNLIQRKAISGYAGFVPRFAWVMGMNYRDGV
TQAMDDFDKNQFVFRHPVCALGERLPRTHWPNTTIYRSQGLIPFYMGFIPSMQDNYALTF
GNSTRRAYQKELDRRSHTL
Sequence of entity 12 (I2, I3), FASTA
>8I7O_12 Protein FAM166C (chains I2, I3)
MAFRSAGTLMTEFNAAFVPPALMPGYKGHVPGVASSFGSSYGNTTFKYFQDLRNTGLEKS
YALLSGGCFPTIFSPNSPLVLTDNSQNWDRWLHQPTYSRSNQDNGRTTELTNFYKTVQQQ
RKYYQDKTGILSRVPYFVLPVKEPDRYPLPTDLPPLSEKSKWNLLRLSPDYKRTYQTFPS
GKRVSSQERQRRDLYFEFRA
Ligands and cofactors
| ID | Name | Formula | Copies |
|---|
| GTP | Guanosine-5'-triphosphate | C10 H16 N5 O14 P3 | 123 |
Primary citation
In-cell structural insight into the stability of sperm microtubule doublet. Tai, L., Yin, G., Huang, X. et al. Cell Discov (2023) 9:116-116. DOI 10.1038/s41421-023-00606-3 · PubMed
Other PDB entries of the same protein (UniProt Q9DAJ2 (AlphaFold model), which also has an AlphaFold model), best resolution first:
- 8IYJ 3.5 Å, Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm
- 9V10 3.7 Å, Cryo-EM structure of the 48-nm repeat doublet microtubule from mouse sperm
- 8I7R 6.5 Å, In situ structure of axonemal doublet microtubules in mouse sperm with 48-nm repeat
- 8TO0 7.7 Å, 48-nm repeating structure of doublets from mouse sperm flagella
Browse structure collections
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