Leiomodin-1 (LMOD1) is a 600-residue protein from Homo sapiens. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: P29536.
Explore in 3D Color by confidence AlphaFold DB UniProt
The mean pLDDT of this model is 63.4 (low overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 29% |
| 70 to 90 | Confident: backbone generally right | 13% |
| 50 to 70 | Low: treat with caution | 15% |
| Below 50 | Very low: often disordered regions | 43% |
What pLDDT means and how to read it
Required for proper contractility of visceral smooth muscle cells (PubMed:28292896). Mediates nucleation of actin filaments
Cytoplasm, myofibril, sarcomere, Cytoplasm, cytoskeleton
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 4Z79 | X-ray | 1.54 Å | A=299-486 |
| 4Z8G | X-ray | 2.1 Å | A=365-486 |
| 4Z94 | X-ray | 2.4 Å | G=364-486 |
MolViewer loads the AlphaFold model straight from AlphaFold DB into your browser. Show it as a cartoon, color by pLDDT, measure distances and angles, and load a PDB structure next to it to compare.