Q4GWU5: Trypsin inhibitor 1 (sfti1)

Trypsin inhibitor 1 (sfti1) is a 56-residue protein from Helianthus annuus. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: Q4GWU5.

Gene
sfti1
Organism
Helianthus annuus
Length
56 residues
Mean pLDDT
67.1
Model
AF-Q4GWU5-F1 v6
Model created
1 Aug 2025
PDB structures
35

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Model confidence (pLDDT)

The mean pLDDT of this model is 67.1 (low overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate20%
70 to 90Confident: backbone generally right16%
50 to 70Low: treat with caution59%
Below 50Very low: often disordered regions5%

What pLDDT means and how to read it

Function

Inhibits trypsin, cathepsin G, elastase, chymotrypsin and thrombin. Does not inhibit factor Xa

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
4XOJX-ray0.91 ÅB=40-52
4K8YX-ray1.0 ÅB=40-53
4KELX-ray1.15 ÅB=40-53
4HGCX-ray1.29 ÅI=40-53
4K1EX-ray1.3 ÅB=40-53
6D3YX-ray1.32 ÅC=40-53
6VXYX-ray1.4 ÅC=40-53
6U22X-ray1.42 ÅC=40-53
6D40X-ray1.43 ÅC=40-53
4ABJX-ray1.45 ÅB=40-53
4ABIX-ray1.55 ÅB=40-53
1SFIX-ray1.65 ÅI=40-53
6D3XX-ray1.8 ÅC/D=40-53
6BVHX-ray1.93 ÅI=40-53
3P8FX-ray2.0 ÅI=40-53
6D3ZX-ray2.0 ÅC=40-53
6Q1UX-ray2.35 ÅC/D=40-53
7ARXX-ray2.42 ÅC=40-53
1JBLNMRA=40-53
1JBNNMRA=40-53

Showing 20 of 35 experimental structures (best resolution first).

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