Q7Z3T8: Zinc finger FYVE domain-containing protein 16 (ZFYVE16)

Zinc finger FYVE domain-containing protein 16 (ZFYVE16) is a 1539-residue protein from Homo sapiens. This is its AlphaFold structure prediction, created 1 Aug 2025. UniProt accession: Q7Z3T8.

Gene
ZFYVE16
Organism
Homo sapiens
Length
1539 residues
Mean pLDDT
54.6
Model
AF-Q7Z3T8-F1 v6
Model created
1 Aug 2025
PDB structures
2

Explore in 3D Color by confidence AlphaFold DB UniProt

Model confidence (pLDDT)

The mean pLDDT of this model is 54.6 (low overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.

pLDDT bandMeaningShare of residues
Above 90Very high: backbone and side chains are usually accurate23%
70 to 90Confident: backbone generally right16%
50 to 70Low: treat with caution4%
Below 50Very low: often disordered regions58%

What pLDDT means and how to read it

Function

May be involved in regulating membrane trafficking in the endosomal pathway. Overexpression induces endosome aggregation. Required to target TOM1 to endosomes

Subunit structure

Interacts (via C-terminus) with TOM1 (via C-terminus); interaction is required to target TOM1 to endosomes (PubMed:14613930). Does not interact with TOM1L1 or TOM1L2 (PubMed:14613930)

Subcellular location

Cytoplasm, Early endosome membrane

Experimental structures in the PDB

Compare the prediction with experimentally determined structures of the same protein:

PDB IDMethodResolutionChains and residues
3T7LX-ray1.09 ÅA=733-820
5MK0X-ray1.76 ÅB/D=1-22

More AlphaFold highlights

About this viewer

MolViewer loads the AlphaFold model straight from AlphaFold DB into your browser. Show it as a cartoon, color by pLDDT, measure distances and angles, and load a PDB structure next to it to compare.