Coat protein is a 157-residue protein from Satellite panicum mosaic virus. This is its AlphaFold structure prediction, created 1 Jan 2024. UniProt accession: Q86993.
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The mean pLDDT of this model is 91.6 (very high overall). pLDDT is AlphaFold's per-residue confidence score from 0 to 100. In MolViewer, choose the B-factor color scheme to color the model by pLDDT, because AlphaFold stores it in the B-factor column.
| pLDDT band | Meaning | Share of residues |
|---|---|---|
| Above 90 | Very high: backbone and side chains are usually accurate | 85% |
| 70 to 90 | Confident: backbone generally right | 4% |
| 50 to 70 | Low: treat with caution | 3% |
| Below 50 | Very low: often disordered regions | 8% |
What pLDDT means and how to read it
Virion
Compare the prediction with experimentally determined structures of the same protein:
| PDB ID | Method | Resolution | Chains and residues |
|---|---|---|---|
| 1STM | X-ray | 1.9 Å | A/B/C/D/E=1-157 |
| 5CVZ | X-ray | 3.3 Å | A=17-157 |
| 5CW0 | X-ray | 4.6 Å | A=1-157 |
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