Crystal structure of the EMAP2/RNA binding domain of the p43 protein from human aminoacyl-tRNA synthetase complex. Determined by X-ray diffraction at 2.05 Å resolution. Released 27 Nov 2000.
Explore 1E7Z in 3D Show helices and sheets RCSB PDB PDBe
1E7Z contains 11 α-helices and 22 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.
| Element | Residues | Length | Sheet |
|---|---|---|---|
| α-helix | 152-154 | 3 | |
| β-strand | 157-167 | 11 | 1 |
| β-strand | 175-180 | 6 | 1 |
| α-helix | 186 | 1 | |
| β-strand | 187-191 | 5 | 1 |
| α-helix | 199-202 | 4 | |
| β-strand | 206-210 | 5 | 1 |
| β-strand | 213 | 1 | 2 |
| α-helix | 214-215 | 2 | |
| β-strand | 216-218 | 3 | 3 |
| β-strand | 221-223 | 3 | 3 |
| β-strand | 226-227 | 2 | 1 |
| β-strand | 229-231 | 3 | 4 |
| β-strand | 236-238 | 3 | 4 |
| α-helix | 239 | 1 | |
| β-strand | 240 | 1 | 5 |
| α-helix | 241-242 | 2 | |
| β-strand | 250 | 1 | 1 |
| β-strand | 252 | 1 | 6 |
| α-helix | 259-261 | 3 | |
| β-strand | 264 | 1 | 2 |
| α-helix | 266-268 | 3 | |
| α-helix | 270-274 | 5 | |
| α-helix | 275-277 | 3 | |
| β-strand | 278-280 | 3 | 4 |
| β-strand | 285 | 1 | 5 |
| β-strand | 286-288 | 3 | 4 |
| β-strand | 291-292 | 2 | 4 |
| β-strand | 294-295 | 2 | 6 |
| β-strand | 299-300 | 2 | 6 |
| β-strand | 302 | 1 | 5 |
| β-strand | 310-312 | 3 | 4 |
| α-helix | 315-317 | 3 |
| Molecule | Chains | Type | Length | Organism | UniProt |
|---|---|---|---|---|---|
| Endothelial-monocyte activating polypeptide II | A | protein | 174 | HOMO SAPIENS | Q12904 (AlphaFold model) |
>1E7Z_1 ENDOTHELIAL-MONOCYTE ACTIVATING POLYPEPTIDE II (chains A) AKPIDVSRLDLRIGCIITARKHPDADSLYVEEVDVGEIAPRTVVSGLVNHVPLEQMQNRM VILLCNLKPAKMRGVLSQAMVMCASSPEKIEILAPPNGSVPGDRITFDAFPGEPDKELNP KKKIWEQIQPDLHTNDECVATYKGVPFEVKGKGVCRAQTMSNSGIKLEHHHHHH
| ID | Name | Formula | Copies |
|---|---|---|---|
| HG | Mercury (II) ion | Hg | 2 |
Structure of the Emapii Domain of Human Aminoacyl-tRNA Synthetase Complex Reveals Evolutionary Dimeric Mimicry. Renault, L., Kerjan, P., Pasqualato, S. et al. EMBO J (2001) 20:570. DOI 10.1093/EMBOJ/20.3.570 · PubMed
Other PDB entries of the same protein (UniProt Q12904 (AlphaFold model), which also has an AlphaFold model), best resolution first:
MolViewer shows 1E7Z directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.