1ODP: Apoa-I peptide

Peptide of human apoa-I residues 166-185. NMR, 5 structures at PH 6.6, 37 degrees celsius and peptide:sds mole ratio of 1:40. Determined by solution NMR. Released 10 Jun 1996.

Method

Solution NMR

Organism

Homo sapiens

Chains

1

Atoms

164

Mol. weight

2.34 kDa

Released

10 Jun 1996

Explore 1ODP in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

1ODP contains 1 α-helix and 0 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 1 helix, 0 β-strands

Molecules and chains

>1ODP_1 APOA-I PEPTIDE (chains A)
YSDELRQRLAARLEALKENG

Primary citation

Conformation of human serum apolipoprotein A-I(166-185) in the presence of sodium dodecyl sulfate or dodecylphosphocholine by 1H-NMR and CD. Evidence for specific peptide-SDS interactions. Wang, G., Treleaven, W.D., Cushley, R.J. Biochim Biophys Acta (1996) 1301:174-184. DOI 10.1016/0005-2760(96)00037-9 · PubMed

Related structures

Other PDB entries of the same protein (UniProt P02647 (AlphaFold model), which also has an AlphaFold model), best resolution first:

• 7KJR 2.08 Å, Cryo-EM structure of SARS-CoV-2 ORF3a
• 9PVY 2.15 Å, Cryo-EM structure of cardiac amyloid fibril from a variant apolipoprotein A-I L90P…
• 3R2P 2.2 Å, 2.2 Angstrom Crystal Structure of C Terminal Truncated Human Apolipoprotein A-I Reveals…
• 9PVZ 2.3 Å, Cryo-EM structure of cardiac amyloid fibril from a variant apolipoprotein A-I R173P…
• 8VXJ 2.7 Å, The crystal structure of human apolipoprotein A-I in complex with Fab 55201
• 9PW3 2.73 Å, Cryo-EM structure of renal amyloid fibril from a variant apolipoprotein A-I R173P…
• 8EQS 3.1 Å, Structure of SARS-CoV-1 Orf3a in late endosome/lysosome-like environment, MSP1D1 nanodisc
• 1AV1 4.0 Å, Crystal structure of human apolipoprotein a-I
• 4V6M 7.1 Å, Structure of the ribosome-SecYE complex in the membrane environment
• 9MXZ 9.8 Å, Lecithin:Cholesterol Acyltransferase Bound to Apolipoprotein A-I dimer in HDL
• 1GW3 The helix-hinge-helix structural motif in human apolipoprotein a-I determined by NMR…
• 1GW4 The helix-hinge-helix structural motif in human apolipoprotein a-I determined by NMR…

Browse structure collections

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