1T6B: B. anthracis Protective Antigen

Crystal structure of B. anthracis Protective Antigen complexed with human Anthrax toxin receptor. Determined by X-ray diffraction at 2.5 Å resolution. Released 20 Jul 2004.

Method
X-ray diffraction
Resolution
2.5 Å
Organisms
Bacillus anthracis, Homo sapiens
Chains
2
Atoms
6,852
Mol. weight
103.77 kDa
Ligands
MN, CA
Released
20 Jul 2004

Explore 1T6B in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

1T6B contains 34 α-helices and 68 β-strands across 2 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain X: 25 helices, 62 β-strands

ElementResiduesLengthSheet
β-strand19-2461
β-strand32-3871
β-strand4212
β-strand4513
α-helix47-504
α-helix55-584
β-strand5914
β-strand62-7091
β-strand7115
β-strand75-7736
β-strand78-8147
α-helix84-863
β-strand87-9151
β-strand94-9851
β-strand106-10836
β-strand11015
β-strand113-12191
β-strand12914
β-strand13013
β-strand13312
β-strand134-13747
β-strand143-14537
β-strand151-15221
α-helix185-1906
β-strand192-19651
β-strand201-20551
α-helix208-2114
β-strand21911
α-helix235-2406
α-helix250-2523
β-strand25618
β-strand262-273129
β-strand289-29249
β-strand293-297510
β-strand302111
β-strand321111
β-strand328-334710
α-helix3351
α-helix346-3505
β-strand357-368129
β-strand374112
α-helix378-3803
β-strand381-385510
β-strand389-394610
β-strand405112
β-strand409-41139
β-strand419-42029
α-helix430-4312
β-strand432-43549
α-helix436-44510
β-strand447-452610
β-strand458-463613
β-strand468-476913
α-helix477-48610
β-strand488-49368
β-strand501-50668
β-strand508114
α-helix519-5202
β-strand522115
α-helix523-5319
β-strand534116
β-strand541-542216
β-strand545-546216
α-helix547-5493
β-strand550-55458
α-helix556-56813
α-helix574-5774
α-helix5811
β-strand582115
α-helix5831
β-strand584114
β-strand588-59368
β-strand596-598317
β-strand604-607417
α-helix609-6157
β-strand621-623318
β-strand626-629418
α-helix633-6375
β-strand639-647919
β-strand653-655319
β-strand666-668318
β-strand674-677418
α-helix678-6814
β-strand695-702819
α-helix703-7053
β-strand724-730719
α-helix731-7344
Chain Y: 9 helices, 6 β-strands
ElementResiduesLengthSheet
β-strand44-50720
α-helix53-586
α-helix59-7214
β-strand79-85720
β-strand89-96820
α-helix99-11113
α-helix120-13415
α-helix136-1383
β-strand141-147720
α-helix155-16814
β-strand171-177720
α-helix183-1875
α-helix193-1953
β-strand196-198320
α-helix202-2087

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Protective AntigenXprotein735Bacillus anthracisP13423 (AlphaFold model)
Anthrax toxin receptor 2Yprotein189Homo sapiensP58335 (AlphaFold model)
Sequence of entity 1 (X), FASTA
>1T6B_1 Protective Antigen (chains X)
EVKQENRLLNESESSSQGLLGYYFSDLNFQAPMVVTSSTTGDLSIPSSELENIPSENQYF
QSAIWSGFIKVKKSDEYTFATSADNHVTMWVDDQEVINKASNSNKIRLEKGRLYQIKIQY
QRENPTEKGLDFKLYWTDSQNKKEVISSDNLQLPELKQKSSNSRKKRSTSAGPTVPDRDN
DGIPDSLEVEGYTVDVKNKRTFLSPWISNIHEKKGLTKYKSSPEKWSTASDPYSDFEKVT
GRIDKNVSPEARHPLVAAYPIVHVDMENIILSKNEDQSTQNTDSQTRTISKNTSTSRTHT
SEVHGNAEVHASFFDIGGSVSAGFSNSNSSTVAIDHSLSLAGERTWAETMGLNTADTARL
NANIRYVNTGTAPIYNVLPTTSLVLGKNQTLATIKAKENQLSQILAPNNYYPSKNLAPIA
LNAQDDFSSTPITMNYNQFLELEKTKQLRLDTDQVYGNIATYNFENGRVRVDTGSNWSEV
LPQIQETTARIIFNGKDLNLVERRIAAVNPSDPLETTKPDMTLKEALKIAFGFNEPNGNL
QYQGKDITEFDFNFDQQTSQNIKNQLAELNATNIYTVLDKIKLNAKMNILIRDKRFHYDR
NNIAVGADESVVKEAHREVINSSTEGLLLNIDKDIRKILSGYIVEIEDTEGLKEVINDRY
DMLNISSLRQDGKTFIDFKKYNDKLPLYISNPNYKVNVYAVTKENTIINPSENGDTSTNG
IKKILIFSKKGYEIG
Sequence of entity 2 (Y), FASTA
>1T6B_2 Anthrax toxin receptor 2 (chains Y)
GSHMLEDPRGRRAFDLYFVLDKSGSVANNWIEIYNFVQQLAERFVSPEMRLSFIVFSSQA
TIILPLTGDRGKISKGLEDLKRVSPVGETYIHEGLKLANEQIQKAGGLKTSSIIIALTDG
KLDGLVPSYAEKEAKISRSLGASVYCVGVLDFEQAQLERIADSKEQVFPVKGGFQALKGI
INSSNGIAA

Ligands and cofactors

IDNameFormulaCopies
MNManganese (II) ionMn1
CACalcium ionCa2

Water and common crystallization additives (PG4, NA) are not listed.

Primary citation

Crystal structure of a complex between anthrax toxin and its host cell receptor. Santelli, E., Bankston, L.A., Leppla, S.H. et al. Nature (2004) 430:905-908. DOI 10.1038/nature02763 · PubMed

Other PDB entries of the same protein (UniProt P13423 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

About this viewer

MolViewer shows 1T6B directly in your browser with nothing to install. Switch between cartoon, ball-and-stick, spacefill and surface views, color by chain, secondary structure or B-factor, measure distances, angles and dihedrals, and share or embed the view.