1TLF: Lac repressor

Unprecedented quaternary structure of E. Coli lac repressor core tetramer: implications for DNA looping. Determined by X-ray diffraction at 2.6 Å resolution. Released 31 Jul 1995.

Method
X-ray diffraction
Resolution
2.6 Å
Organism
Escherichia coli
Chains
4
Atoms
8,924
Mol. weight
130.49 kDa
Ligands
IPT, EMC
Released
31 Jul 1995

Explore 1TLF in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

1TLF contains 44 α-helices and 63 β-strands across 4 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 12 helices, 14 β-strands

ElementResiduesLengthSheet
β-strand63-6861
α-helix74-8916
β-strand93-9861
α-helix104-11512
β-strand121-12771
α-helix130-13910
β-strand145-14951
β-strand158-16141
α-helix163-17614
β-strand182-18652
α-helix192-20716
β-strand214-21742
α-helix222-23413
β-strand241-24442
α-helix247-25913
β-strand26413
β-strand26813
β-strand269-27462
α-helix277-2815
α-helix285-2862
β-strand287-29042
α-helix293-30816
β-strand316-31941
α-helix3201
β-strand322-32432
α-helix339-35517
Chain B: 10 helices, 17 β-strands
ElementResiduesLengthSheet
β-strand63-6861
α-helix74-8916
β-strand93-9861
α-helix103-11513
β-strand121-12551
α-helix130-13910
β-strand145-14731
β-strand157-16151
α-helix163-17614
β-strand182-18544
β-strand18615
α-helix192-20716
β-strand21414
β-strand21715
α-helix222-23312
β-strand241-24444
α-helix247-25812
β-strand26416
β-strand26816
β-strand269-27134
β-strand272-27437
α-helix285-2873
β-strand288-29037
α-helix293-30917
β-strand316-31941
β-strand322-32437
α-helix339-35517
Chain C: 10 helices, 16 β-strands
ElementResiduesLengthSheet
β-strand63-6868
α-helix74-8916
β-strand93-9868
α-helix104-11512
β-strand121-12558
α-helix130-13910
β-strand145-14738
β-strand157-16158
α-helix163-17715
β-strand182-18659
α-helix192-20716
β-strand214-21749
α-helix222-23413
β-strand241-24449
α-helix247-25913
β-strand264110
β-strand268110
β-strand269-27139
β-strand274111
α-helix277-2804
β-strand28719
β-strand288-290311
α-helix293-30816
β-strand316-31948
β-strand322-324311
α-helix339-35517
Chain D: 12 helices, 16 β-strands
ElementResiduesLengthSheet
β-strand63-6868
α-helix74-8916
β-strand93-9868
α-helix104-11512
β-strand121-12558
α-helix130-1389
β-strand145-14738
β-strand15818
β-strand160-161212
α-helix163-17614
β-strand182-186513
α-helix192-20615
β-strand214-217413
α-helix222-23312
β-strand241-244413
α-helix247-25913
α-helix262-2632
β-strand264114
β-strand268114
β-strand269-271313
β-strand272-274315
α-helix277-2793
α-helix285-2873
β-strand288-290315
α-helix293-30715
β-strand318-319212
β-strand322-324315
α-helix339-35416

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Lac repressorA, B, C, Dprotein301Escherichia coliP03023 (AlphaFold model)
Sequence of entity 1 (A, B, C, D), FASTA
>1TLF_1 LAC REPRESSOR (chains A, B, C, D)
QSLLIGVATSSLALHAPSQIVAAIKSRADQLGASVVVSMVERSGVEACKAAVHNLLAQRV
SGLIINYPLDDQDAIAVEAACTNVPALFLDVSDQTPINSIIFSHEDGTRLGVEHLVALGH
QQIALLAGPLSSVSARLRLAGWHKYLTRNQIQPIAEREGDWSAMSGFQQTMQMLNEGIVP
TAMLVANDQMALGAMRAITESGLRVGADISVVGYDDTEDSSCYIPPLTTIKQDFRLLGQT
SVDRLLQLSQGQAVKGNQLLPVSLVKRKTTLAPNTQTASPRALADSLMQLARQVSRLESG
Q

Ligands and cofactors

IDNameFormulaCopies
IPT1-methylethyl 1-thio-beta-D-galactopyranosideC9 H18 O5 S4
EMCEthyl mercury ionC2 H5 Hg4

Primary citation

Crystal structure of lac repressor core tetramer and its implications for DNA looping. Friedman, A.M., Fischmann, T.O., Steitz, T.A. Science (1995) 268:1721-1727. PubMed

Other PDB entries of the same protein (UniProt P03023 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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