1YN4: EapH1

Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens. Determined by X-ray diffraction at 1.8 Å resolution. Released 1 Mar 2005.

Method
X-ray diffraction
Resolution
1.8 Å
Organism
Staphylococcus aureus
Chains
1
Atoms
851
Mol. weight
11.24 kDa
Ligands
ZN
Released
1 Mar 2005

Explore 1YN4 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

1YN4 contains 4 α-helices and 8 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 4 helices, 8 β-strands

ElementResiduesLengthSheet
β-strand44-53101
β-strand56-5721
β-strand62-6761
β-strand72-7322
α-helix74-8916
α-helix93-975
β-strand102-10871
β-strand113-11751
α-helix122-1243
β-strand127-12822
α-helix130-1323
β-strand133-14081

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
EapH1Aprotein99Staphylococcus aureusA0A0H3K0M1 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>1YN4_1 EapH1 (chains A)
GKHTVPYTISVDGITALHRTYFVFPENKKVLYQEIDSKVKNELASQRGVTTEKINNAQTA
TYTLTLNDGNKKVVNLKKNDDAKNSIDPSTIKQIQIVVK

Ligands and cofactors

IDNameFormulaCopies
ZNZinc ionZn2

Primary citation

The Crystal Structures of EAP Domains from Staphylococcus aureus Reveal an Unexpected Homology to Bacterial Superantigens. Geisbrecht, B.V., Hamaoka, B.Y., Perman, B. et al. J Biol Chem (2005) 280:17243-17250. DOI 10.1074/jbc.M412311200 · PubMed

Other PDB entries of the same protein (UniProt A0A0H3K0M1 (AlphaFold model), which also has an AlphaFold model), best resolution first:

Browse structure collections

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