2BOX: PDB entry 2BOX

EGF Domains 1,2,5 of human EMR2, a 7-TM immune system molecule, in complex with strontium. Determined by X-ray diffraction at 2.5 Å resolution. Released 18 Oct 2006.

Method
X-ray diffraction
Resolution
2.5 Å
Organism
HOMO SAPIENS
Chains
1
Atoms
1,123
Mol. weight
15.94 kDa
Ligands
SR, CAC
Released
18 Oct 2006

Explore 2BOX in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2BOX contains 8 α-helices and 15 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 8 helices, 15 β-strands

ElementResiduesLengthSheet
α-helix9-102
β-strand13-1531
β-strand21-2331
α-helix241
β-strand27-2822
β-strand3411
β-strand42-4322
α-helix441
α-helix46-483
β-strand59-6463
β-strand67-7263
α-helix731
β-strand76-7834
β-strand8513
α-helix88-903
β-strand93-9534
α-helix98-1014
β-strand111-11555
β-strand118-12255
β-strand12916
α-helix1301
β-strand13715
β-strand14216

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Egf-like module containing mucin-like hormone receptor-like 2 precursorAprotein143HOMO SAPIENSQ9UHX3 (AlphaFold model)
Sequence of entity 1 (A), FASTA
>2BOX_1 EGF-LIKE MODULE CONTAINING MUCIN-LIKE HORMONE RECEPTOR-LIKE 2 PRECURSOR (chains A)
DSRGCARWCPQDSSCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSD
CWNTEGSYDCVCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYS
CRCRPGWKPRHGIPNNQKDTVCE

Ligands and cofactors

IDNameFormulaCopies
SRStrontium ionSr2
CACCacodylate ionC2 H6 As O21

Water and common crystallization additives (CL) are not listed.

Primary citation

Structural and Functional Characterization of a Novel T Cell Receptor Co-Regulatory Protein Complex, Cd97-Cd55. Abbott, R.J.M., Spendlove, I., Roversi, P. et al. J Biol Chem (2007) 282:22023. DOI 10.1074/JBC.M702588200 · PubMed

Other PDB entries of the same protein (UniProt Q9UHX3 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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