2FY8: Calcium-gated potassium channel mthK

Crystal structure of MthK rck domain in its ligand-free gating-ring form. Determined by X-ray diffraction at 2.79 Å resolution. Released 5 Sept 2006.

Method
X-ray diffraction
Resolution
2.79 Å
Organism
Methanothermobacter thermautotrophicus
Chains
8
Atoms
13,851
Mol. weight
203.58 kDa
Released
5 Sept 2006

Explore 2FY8 in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2FY8 contains 110 α-helices and 96 β-strands across 8 chains. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 14 helices, 12 β-strands

ElementResiduesLengthSheet
β-strand118-12141
α-helix125-1328
α-helix136-1383
β-strand139-14351
α-helix148-1547
β-strand158-16141
α-helix167-1726
β-strand180-18341
α-helix188-20114
β-strand207-21041
α-helix214-2163
α-helix217-2248
β-strand227-22931
α-helix231-24111
α-helix247-2526
α-helix253-2575
β-strand263-26862
β-strand27913
α-helix280-2834
α-helix285-2895
α-helix2911
β-strand292-29872
β-strand301-30442
β-strand31113
β-strand317-32262
α-helix324-33411
Chain B: 15 helices, 12 β-strands
ElementResiduesLengthSheet
β-strand118-12144
α-helix125-1328
β-strand139-14354
α-helix148-1547
β-strand158-16144
α-helix167-1726
β-strand180-18344
α-helix188-20114
β-strand206-21054
α-helix214-2163
α-helix217-2237
β-strand227-22934
α-helix231-24111
α-helix247-2526
α-helix253-2575
β-strand263-26865
β-strand27916
α-helix280-2834
α-helix285-2895
α-helix2911
β-strand292-29875
β-strand301-30445
α-helix3101
β-strand31116
α-helix3121
β-strand317-32265
α-helix324-33310
Chain C: 12 helices, 12 β-strands
ElementResiduesLengthSheet
β-strand118-12147
α-helix125-1339
β-strand139-14357
α-helix148-1536
β-strand158-16147
α-helix167-1726
β-strand180-18347
α-helix188-20114
β-strand206-21057
α-helix214-2163
α-helix217-2237
β-strand227-22937
α-helix231-24111
α-helix247-2526
α-helix253-2575
β-strand263-26868
β-strand27919
α-helix280-2834
α-helix285-2895
β-strand292-29768
β-strand302-30438
β-strand31119
β-strand317-32268
α-helix324-33310
Chain D: 16 helices, 12 β-strands
ElementResiduesLengthSheet
β-strand118-121410
α-helix125-1328
α-helix136-1383
β-strand139-143510
α-helix146-1483
α-helix149-1546
β-strand158-161410
α-helix167-1726
β-strand180-183410
α-helix188-20114
β-strand207-210410
α-helix214-2163
α-helix217-2237
β-strand227-229310
α-helix231-24111
α-helix247-2515
α-helix252-2576
β-strand263-268611
β-strand279112
α-helix280-2834
α-helix285-2895
α-helix2911
β-strand292-298711
β-strand301-304411
β-strand311112
α-helix3161
β-strand317-322611
α-helix324-3329
Chain E: 13 helices, 12 β-strands
ElementResiduesLengthSheet
β-strand118-121413
α-helix125-1328
β-strand139-143513
α-helix148-1536
β-strand158-161413
α-helix167-1726
β-strand180-183413
α-helix188-20114
β-strand207-210413
α-helix214-2163
α-helix217-2237
β-strand227-229313
α-helix231-24010
α-helix247-2526
α-helix253-2575
β-strand263-268614
α-helix269-2702
β-strand279115
α-helix280-2834
α-helix285-2895
β-strand292-298714
β-strand301-304414
β-strand311115
β-strand317-322614
α-helix324-3329
Chain F: 13 helices, 12 β-strands
ElementResiduesLengthSheet
β-strand118-121416
α-helix125-1328
β-strand139-143516
α-helix148-1547
β-strand158-161416
α-helix167-1726
β-strand180-183416
α-helix188-20114
β-strand206-210516
α-helix214-2163
α-helix217-2237
β-strand227-229316
α-helix231-24111
α-helix247-2526
α-helix253-2575
β-strand263-268617
β-strand279118
α-helix280-2834
α-helix285-2895
α-helix2911
β-strand292-297617
β-strand302-304317
β-strand311118
β-strand317-322617
α-helix324-33310
Chain G: 15 helices, 12 β-strands
ElementResiduesLengthSheet
β-strand118-121419
α-helix125-1339
β-strand139-143519
α-helix146-1483
α-helix149-1546
β-strand158-161419
α-helix167-1726
β-strand180-183419
α-helix188-20114
β-strand207-210419
α-helix214-2163
α-helix217-2237
β-strand227-229319
α-helix231-24111
α-helix247-2526
α-helix253-2575
β-strand263-268620
β-strand279121
α-helix280-2834
α-helix285-2895
β-strand292-297620
β-strand302-304320
α-helix3101
β-strand311121
α-helix3121
β-strand317-322620
α-helix324-3329
Chain H: 12 helices, 12 β-strands
ElementResiduesLengthSheet
β-strand118-121422
α-helix125-1339
β-strand139-143522
α-helix148-1547
β-strand158-161422
α-helix167-1726
β-strand180-183422
α-helix188-20114
β-strand206-210522
α-helix214-2163
α-helix217-2237
β-strand227-229322
α-helix231-24111
α-helix247-25610
β-strand263-268623
β-strand279124
α-helix280-2834
α-helix285-2895
α-helix2911
β-strand292-298723
β-strand301-304423
β-strand311124
β-strand317-322623
α-helix324-33411

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Calcium-gated potassium channel mthKA, B, C, D, E, F, G, Hprotein230Methanothermobacter thermautotrophicusO27564 (AlphaFold model)
Sequence of entity 1 (A, B, C, D, E, F, G, H), FASTA
>2FY8_1 Calcium-gated potassium channel mthK (chains A, B, C, D, E, F, G, H)
MGLIDVAKSRHVVICGWSESTLECLRELRGSEVFVLAEDENVRKKVLRSGANFVHGDPTR
VSDLEKANVRGARAVIVNLESDSETIHCILGIRKIDESVRIIAEAERYENIEQLRMAGAD
QVISPFVISGRLMSRSIDDGYEAMFVQDVLAEESTRRMVEVPIPEGSKLEGVSVLDADIH
DVTGVIIIGVGRGDELIIDPPRDYSFRAGDIILGIGKPEEIERLKNYISA

Primary citation

Crystal Structures of a Ligand-free MthK Gating Ring: Insights into the Ligand Gating Mechanism of K(+) Channels. Ye, S., Li, Y., Chen, L. et al. Cell (2006) 126:1161-1173. DOI 10.1016/j.cell.2006.08.029 · PubMed

Other PDB entries of the same protein (UniProt O27564 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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