2GKR: N-terminally truncated OMTKY3-del(1-5)

Crystal structure of the N-terminally truncated OMTKY3-del(1-5). Determined by X-ray diffraction at 1.16 Å resolution. Released 13 Feb 2007.

Method
X-ray diffraction
Resolution
1.16 Å
Organism
Meleagris gallopavo
Chains
1
Atoms
456
Mol. weight
5.62 kDa
Released
13 Feb 2007

Explore 2GKR in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2GKR contains 1 α-helix and 3 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain I: 1 helix, 3 β-strands

ElementResiduesLengthSheet
β-strand23-2531
β-strand30-3121
α-helix34-4310
β-strand50-5341

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
OvomucoidIprotein51Meleagris gallopavoP68390 (AlphaFold model)
Sequence of entity 1 (I), FASTA
>2GKR_1 Ovomucoid (chains I)
VDCSEYPKPACTLEYRPLCGSDNKTYGNKCNFCNAVVESNGTLTLSHFGKC

Primary citation

Structural Insights into the Non-additivity Effects in the Sequence-to-Reactivity Algorithm for Serine Peptidases and their Inhibitors. Lee, T.W., Qasim, M.A., Laskowski, M. et al. J Mol Biol (2007) 367:527-546. DOI 10.1016/j.jmb.2007.01.008 · PubMed

Other PDB entries of the same protein (UniProt P68390 (AlphaFold model), which also has an AlphaFold model), best resolution first:

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