2IWJ: Gag-pol polyprotein

Solution structure of the ZN complex of HIV-2 NCP(23-49) peptide, encompassing protein cchc-linker, distal cchc ZN-binding motif and C- terminal tail. Determined by solution NMR. Released 9 Oct 2007.

Method
Solution NMR
Organism
HUMAN IMMUNODEFICIENCY VIRUS TYPE 2
Chains
1
Atoms
209
Mol. weight
3.09 kDa
Ligands
ZN
Released
9 Oct 2007

Explore 2IWJ in 3D Show helices and sheets RCSB PDB PDBe

Secondary structure: helices and β-sheets

2IWJ contains 2 α-helices and 0 β-strands across 1 chain. Residue ranges use author residue numbering, as in the PDB file, from PDBe. To see them in 3D, choose the Cartoon representation with Secondary structure coloring: helices, sheets and coils get different colors.

Chain A: 2 helices, 0 β-strands

ElementResiduesLengthSheet
α-helix25-273
α-helix44-474

Molecules and chains

MoleculeChainsTypeLengthOrganismUniProt
Gag-pol polyproteinAprotein27HUMAN IMMUNODEFICIENCY VIRUS TYPE 2P18042
Sequence of entity 1 (A), FASTA
>2IWJ_1 GAG-POL POLYPROTEIN (chains A)
RAPRRQGCWKCGKTGHVMAKCPERQAG

Ligands and cofactors

IDNameFormulaCopies
ZNZinc ionZn1

Primary citation

Structural Features of the C-Terminal Zinc Finger Domain of the HIV-2 Nc Protein (Residues 23-49). Amodeo, P., Castiglione Morelli, M.A., Ostuni, A. et al. To be published.

Other PDB entries of the same protein (UniProt P18042), best resolution first:

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